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PDB: 45955 results

1ZFE
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GCA Duplex B-DNA
Descriptor: 5'-D(*CP*CP*TP*GP*CP*GP*CP*AP*GP*G)-3'
Authors:Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
Deposit date:2005-04-20
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2Q19
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2-keto-3-deoxy-D-arabinonate dehydratase apo form
Descriptor: 2-keto-3-deoxy-D-arabinonate dehydratase
Authors:Barends, T, Brouns, S, Worm, P, Akerboom, J, Turnbull, A, Salmon, L.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insight into substrate binding and catalysis of a novel 2-keto-3-deoxy-D-arabinonate dehydratase illustrates common mechanistic features of the FAH superfamily.
J.Mol.Biol., 379, 2008
1Z0Q
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Aqueous Solution Structure of the Alzheimer's Disease Abeta Peptide (1-42)
Descriptor: Alzheimer's disease amyloid
Authors:Tomaselli, S, Esposito, V, Vangone, P, van Nuland, N.A, Bonvin, A.M, Guerrini, R, Tancredi, T, Temussi, P.A, Picone, D.
Deposit date:2005-03-02
Release date:2006-05-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The alpha-to-beta Conformational Transition of Alzheimer's Abeta-(1-42) Peptide in Aqueous Media is Reversible: A Step by Step Conformational Analysis Suggests the Location of beta Conformation Seeding
Chembiochem, 7, 2006
2JPM
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Lactococcin G-b in TFE
Descriptor: Bacteriocin lactococcin-G subunit beta
Authors:Rogne, P, Fimland, G, Nissen-Meyer, J, Kristiansen, P.E.
Deposit date:2007-05-15
Release date:2008-02-19
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Three-dimensional structure of the two peptides that constitute the two-peptide bacteriocin lactococcin G
Biochim.Biophys.Acta, 1784, 2008
4NFO
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Crystal Structure Analysis of the 16mer GCAGACUUAAGUCUGC
Descriptor: GCAGACUUAAGUCUGC, SPERMINE
Authors:Beal, P.A, Fisher, A.J, Phelps, K.J, Ibarra-Soza, J.M, Zheng, Y.
Deposit date:2013-10-31
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Click Modification of RNA at Adenosine: Structure and Reactivity of 7-Ethynyl- and 7-Triazolyl-8-aza-7-deazaadenosine in RNA.
Acs Chem.Biol., 9, 2014
3KFB
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Crystal structure of a group II chaperonin from Methanococcus maripaludis
Descriptor: Chaperonin, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
2D7F
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Crystal structure of A lectin from canavalia gladiata seeds complexed with alpha-methyl-mannoside and alpha-aminobutyric acid
Descriptor: CALCIUM ION, Concanavalin A, D-ALPHA-AMINOBUTYRIC ACID, ...
Authors:Delatorre, P, Rocha, B.A.M, Souza, E.P, Freitas, B.T, Moreno, F.B.B.M, Sampaio, A.H, Azevedo Jr, W.F, Cavada, B.S.
Deposit date:2005-11-19
Release date:2006-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of a lectin from Canavalia gladiata seeds: new structural insights for old molecules
Bmc Struct.Biol., 7, 2007
3KFE
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Crystal structures of a group II chaperonin from Methanococcus maripaludis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Chaperonin, MAGNESIUM ION, ...
Authors:Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
Deposit date:2009-10-27
Release date:2010-06-23
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
4S0I
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Biphenylalanine modified threonyl-tRNA synthetase from Pyrococcus abyssi: 11BIF, 42F, 79S, and 123A mutant
Descriptor: Threonine--tRNA ligase
Authors:Pearson, A.D, Mills, J.H, Song, Y, Nasertorabi, F, Han, G.W, Baker, D, Stevens, R.C, Schultz, P.G.
Deposit date:2014-12-31
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Transition states. Trapping a transition state in a computationally designed protein bottle.
Science, 347, 2015
3KI5
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Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-M
Descriptor: Cholix toxin, N-(6-oxo-5,6-dihydrobenzo[c][1,5]naphthyridin-2-yl)-2-(4-pyrrolidin-1-ylpiperidin-1-yl)acetamide
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
4C71
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Crystal structure of M. tuberculosis C171Q KasA in complex with TLM18
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(10R)-10-methyloctadecanoyl]oxy}propyl phosphate, (R,E)-3-(4-AZIDOBUTYL)-4-HYDROXY-5-METHYL-5-(2-METHYLBUTA-1,3-DIEN-1-YL)THIOPHEN-2(5H)-ONE, 1,2-ETHANEDIOL, ...
Authors:Schiebel, J, Kapilashrami, K, Fekete, A, Bommineni, G.R, Schaefer, C.M, Mueller, M.J, Tonge, P.J, Kisker, C.
Deposit date:2013-09-19
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Recognition of Mycolic Acid Precursors by Kasa, a Condensing Enzyme and Drug Target from Mycobacterium Tuberculosis
J.Biol.Chem., 288, 2013
2GWQ
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Crystal structure of D(G4T4G4) with four quadruplexes in the asymmetric unit.
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
Authors:Lee, M.P.H, Parkinson, G.N, Neidle, S.
Deposit date:2006-05-05
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of D(G4T4G4) with four and six quadruplexes in the asymmetric unit.
To be Published
4JC6
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Mercury activation of the plant aquaporin SoPIP2;1 - structural and functional characterization
Descriptor: Aquaporin, CADMIUM ION, MERCURY (II) ION, ...
Authors:Frick, A, Jarva, M, Nyblom, M, Ekvall, M, Uzdavinys, P, Tornroth-Horsefield, S.
Deposit date:2013-02-21
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Mercury increases water permeability of a plant aquaporin through a non-cysteine-related mechanism.
Biochem.J., 454, 2013
1JWX
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Chalcone Synthase--F215S mutant
Descriptor: CHALCONE SYNTHASE 2
Authors:Jez, J.M, Bowman, M.E, Noel, J.P.
Deposit date:2001-09-05
Release date:2002-07-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Expanding the biosynthetic repertoire of plant type III polyketide synthases by altering starter molecule specificity.
Proc.Natl.Acad.Sci.USA, 99, 2002
7MJ0
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BU of 7mj0 by Molmil
LarB, a carboxylase/hydrolase involved in synthesis of the cofactor for lactate racemase, in complex with adenosine monophosphate AMP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
Authors:Chatterjee, S, Rankin, J.A, Lagishetty, S, Hu, J, Hausinger, R.P.
Deposit date:2021-04-19
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The LarB carboxylase/hydrolase forms a transient cysteinyl-pyridine intermediate during nickel-pincer nucleotide cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
4NO9
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yCP in complex with Z-Leu-Leu-Leu-epoxyketone
Descriptor: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-leucinamide, N-[(benzyloxy)carbonyl]-L-leucyl-N-{(1R,2S)-1-hydroxy-4-methyl-1-[(2R)-2-methyloxiran-2-yl]pentan-2-yl}-L-leucinamide, ...
Authors:Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
Deposit date:2013-11-19
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
1T37
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Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between group I phospholipase A2 and a designed pentapeptide Leu-Ala-Ile-Tyr-Ser at 2.6A resolution
Descriptor: ACETATE ION, Phospholipase A2 isoform 3, Synthetic peptide
Authors:Singh, R.K, Singh, N, Jabeen, T, Makker, J, Sharma, S, Dey, S, Singh, T.P.
Deposit date:2004-04-25
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of group I PLA2 with a group II-specific peptide Leu-Ala-Ile-Tyr-Ser (LAIYS) at 2.6 A resolution.
J.Drug Target., 13, 2005
4JDR
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Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase from escherichia coli
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Chandrasekhar, K, Arjunan, P, Furey, W.
Deposit date:2013-02-25
Release date:2013-04-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight to the Interaction of the Dihydrolipoamide Acetyltransferase (E2) Core with the Peripheral Components in the Escherichia coli Pyruvate Dehydrogenase Complex via Multifaceted Structural Approaches.
J.Biol.Chem., 288, 2013
4JFD
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Preservation of peptide specificity during TCR-MHC contact dominated affinity enhancement of a melanoma-specific TCR
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
Authors:Rizkallah, P.J, Cole, D.K, Madura, F, Sewell, A.K.
Deposit date:2013-02-28
Release date:2013-05-29
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:T-cell receptor specificity maintained by altered thermodynamics.
J.Biol.Chem., 288, 2013
1GM4
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OXIDISED STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 at pH 7.6
Descriptor: CYTOCHROME C3, HEME C, SULFATE ION
Authors:Bento, I, Louro, R, Matias, P.M, Catarino, T, Baptista, A.M, Soares, C.M, Carrondo, M.A, Turner, D.L, Xavier, A.V.
Deposit date:2001-09-10
Release date:2002-09-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational Component in the Coupled Transfer of Multiple Electrons and Protons in a Monomeric Tetraheme Cytochrome.
J.Biol.Chem., 276, 2001
2H4U
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Crystal Structure of Human Thioesterase Superfamily Member 2
Descriptor: Thioesterase superfamily member 2
Authors:Ogg, D.J, Uppenberg, J, Arrowsmith, C, Berglund, H, Edwards, A, Ehn, M, Grasslund, S, Flodin, S, Hammerstrom, M, Hogbom, M, Holmberg-Schiavone, L, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Thorsell, A.-G, Weigelt, J, Hallberg, M, Structural Genomics Consortium (SGC)
Deposit date:2006-05-25
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of human thioesterase superfamily member 2
To be Published
1T5Z
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Crystal Structure of the Androgen Receptor Ligand Binding Domain (LBD) with DHT and a peptide derived from its physiological coactivator ARA70
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor coactivator 4
Authors:Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Webb, P, Fletterick, R.J, Guy, R.K.
Deposit date:2004-05-05
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor.
J.Biol.Chem., 280, 2005
1T63
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Crystal Structure of the Androgen Receptor Ligand Binding Domain with DHT and a peptide derived from its physiological coactivator GRIP1 NR box3
Descriptor: 5-ALPHA-DIHYDROTESTOSTERONE, Androgen receptor, Nuclear receptor coactivator 2
Authors:Estebanez-Perpina, E, Moore, J.M.R, Mar, E, Nguyen, P, Delgado-Rodrigues, E, Baxter, J.D, Webb, P, Fletterick, R.J, Guy, R.K.
Deposit date:2004-05-05
Release date:2005-01-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The Molecular Mechanisms of Coactivator Utilization in Ligand-dependent Transactivation by the Androgen Receptor.
J.Biol.Chem., 280, 2005
4C6Z
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Crystal structure of M. tuberculosis C171Q KasA in complex with TLM3
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(10R)-10-methyloctadecanoyl]oxy}propyl phosphate, (5R)-3-ethyl-4-hydroxy-5-methyl-5-[(1E)-2-methylbuta-1,3-dien-1-yl]thiophen-2(5H)-one, 1,2-ETHANEDIOL, ...
Authors:Schiebel, J, Kapilashrami, K, Fekete, A, Bommineni, G.R, Schaefer, C.M, Mueller, M.J, Tonge, P.J, Kisker, C.
Deposit date:2013-09-19
Release date:2013-10-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Recognition of Mycolic Acid Precursors by Kasa, a Condensing Enzyme and Drug Target from Mycobacterium Tuberculosis
J.Biol.Chem., 288, 2013
1Z27
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Crystal structure of Native Pvs25, an ookinete protein from Plasmodium vivax.
Descriptor: ookinete surface protein Pvs25
Authors:Saxena, A.K, Singh, K, Su, H.P, Klein, M.M, Stowers, A.W, Saul, A.J, Long, C.A, Garboczi, D.N.
Deposit date:2005-03-07
Release date:2005-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The essential mosquito-stage P25 and P28 proteins from Plasmodium form tile-like triangular prisms
Nat.Struct.Mol.Biol., 13, 2006

224004

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