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PDB: 46375 件

3S78
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The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase
分子名称: Carbonic anhydrase 2, ZINC ION, thiophene-2-sulfonamide
著者Snyder, P.W, Heroux, A, Whitesides, G.W.
登録日2011-05-26
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase.
Proc.Natl.Acad.Sci.USA, 108, 2011
2ZXB
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alpha-L-fucosidase complexed with inhibitor, ph-6FNJ
分子名称: (2S,3R,4S,5R)-2-benzylpiperidine-3,4,5-triol, Alpha-L-fucosidase, putative
著者Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
登録日2008-12-22
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
3RYX
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Fluoroalkyl and Alkyl Chains Have Similar Hydrophobicities in Binding to the Hydrophobic Wall of Carbonic Anhydrase
分子名称: Carbonic anhydrase 2, N-(2,2,3,3,3-pentafluoropropyl)-4-sulfamoylbenzamide, ZINC ION
著者Snyder, P.W, Bai, S, Heroux, A, Whitesides, G.W.
登録日2011-05-11
公開日2011-08-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Fluoroalkyl and alkyl chains have similar hydrophobicities in binding to the "hydrophobic wall" of carbonic anhydrase.
J.Am.Chem.Soc., 133, 2011
7FIY
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Cryo-EM structure of the tirzepatide-bound human GIPR-Gs complex
分子名称: CHOLESTEROL, Gastric inhibitory polypeptide receptor,Gastric inhibitory polypeptide receptor,human glucose-dependent insulinotropic polypeptide receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Zhao, F.H, Zhou, Q.T, Cong, Z.T, Hang, K.N, Zou, X.Y, Zhang, C, Chen, Y, Dai, A.T, Liang, A.Y, Ming, Q.Q, Wang, M, Chen, L.N, Xu, P.Y, Chang, R.L, Feng, W.B, Xia, T, Zhang, Y, Wu, B.L, Yang, D.H, Zhao, L.H, Xu, H.E, Wang, M.W.
登録日2021-08-01
公開日2022-03-02
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors.
Nat Commun, 13, 2022
5IED
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Murine endoplasmic reticulum alpha-glucosidase II with castanospermine
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Caputo, A.T, Roversi, P, Alonzi, D.S, Kiappes, J.L, Zitzmann, N.
登録日2016-02-25
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structures of mammalian ER alpha-glucosidase II capture the binding modes of broad-spectrum iminosugar antivirals.
Proc.Natl.Acad.Sci.USA, 113, 2016
3VZZ
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Crystal structure of PcrB complexed with FsPP from bacillus subtilis subap. subtilis str. 168
分子名称: CHLORIDE ION, Heptaprenylglyceryl phosphate synthase, MAGNESIUM ION, ...
著者Ren, F, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Chan, H.C, Liu, Y.L, Wang, K, Chen, C.C, Pang, X, He, M, Li, Y, Oldfield, E, Guo, R.T.
登録日2012-10-17
公開日2012-12-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Insights into TIM-barrel prenyl transferase mechanisms: crystal structures of PcrB from Bacillus subtilis and Staphylococcus aureus
Chembiochem, 14, 2013
3A0M
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Structure of (PPG)4-OVG-(PPG)4, monoclinic, twinned crystal
分子名称: collagen-like peptide
著者Okuyama, K, Morimoto, T, Mizuno, K, Bachinger, H.P.
登録日2009-03-21
公開日2010-03-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Stabilization of triple-helical structures of collagen peptides containing a Hyp-Thr-Gly, Hyp-Val-Gly, or Hyp-Ser-Gly sequence.
Biopolymers, 95, 2011
7SR0
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Single chain trimer HLA-A*02:01 (H98L, Y108C) with HPV.16 E7 peptide YMLDLQPET
分子名称: PHOSPHATE ION, Protein E7 peptide,Beta-2-microglobulin,MHC class I antigen chimera, VHH
著者Finton, K.A.K, Rupert, P.B.
登録日2021-11-07
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Effects of HLA single chain trimer design on peptide presentation and stability.
Front Immunol, 14, 2023
5LGZ
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Structure of Photoreduced Pentaerythritol Tetranitrate Reductase
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, ISOPROPYL ALCOHOL, Pentaerythritol tetranitrate reductase
著者Kwon, H, Smith, O.M, Moody, P.C.E.
登録日2016-07-08
公開日2017-02-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Combining X-ray and neutron crystallography with spectroscopy.
Acta Crystallogr D Struct Biol, 73, 2017
5IOP
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Cetuximab Fab in complex with 4-bromophenylalanine meditope variant
分子名称: Cetuximab Fab, heavy chain, light chain, ...
著者Bzymek, K.P, Williams, J.C.
登録日2016-03-08
公開日2016-10-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Acta Crystallogr F Struct Biol Commun, 72, 2016
2MZG
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Purotoxin-2 NMR structure in DPC micelles
分子名称: Purotoxin-2
著者Nadezhdin, K, Oparin, P, Vassilevski, A, Grishin, E, Arseniev, A.
登録日2015-02-12
公開日2016-04-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of purotoxin-2 from wolf spider: modular design and membrane-assisted mode of action in arachnid toxins.
Biochem. J., 473, 2016
1PRT
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THE CRYSTAL STRUCTURE OF PERTUSSIS TOXIN
分子名称: PERTUSSIS TOXIN (SUBUNIT S1), PERTUSSIS TOXIN (SUBUNIT S2), PERTUSSIS TOXIN (SUBUNIT S3), ...
著者Stein, P.E, Read, R.J.
登録日1993-11-22
公開日1995-01-26
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of pertussis toxin.
Structure, 2, 1994
1Q7A
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Crystal structure of the complex formed between russell's viper phospholipase A2 and an antiinflammatory agent oxyphenbutazone at 1.6A resolution
分子名称: 4-BUTYL-1-(4-HYDROXYPHENYL)-2-PHENYLPYRAZOLIDINE-3,5-DIONE, METHANOL, Phospholipase A2 VRV-PL-VIIIa, ...
著者Singh, N, Jabeen, T, Sharma, S, Singh, T.P.
登録日2003-08-17
公開日2004-05-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Phospholipase A2 as a target protein for nonsteroidal anti-inflammatory drugs (NSAIDS): crystal structure of the complex formed between phospholipase A2 and oxyphenbutazone at 1.6 A resolution.
Biochemistry, 43, 2004
5LK1
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Structure of hantavirus envelope glycoprotein Gc in postfusion conformation in presence of 200 mM KCL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein, POTASSIUM ION, ...
著者Guardado-Calvo, P, Rey, F.A.
登録日2016-07-20
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc.
Plos Pathog., 12, 2016
3S77
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The origin of the hydrophobic effect in the molecular recognition of arylsulfonamides by carbonic anhydrase
分子名称: 1,3-thiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Snyder, P.W, Heroux, A, Whitesides, G.W.
登録日2011-05-26
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Mechanism of the hydrophobic effect in the biomolecular recognition of arylsulfonamides by carbonic anhydrase.
Proc.Natl.Acad.Sci.USA, 108, 2011
2ZXA
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alpha-L-fucosidase complexed with inhibitor, FNJ-acetyl
分子名称: Alpha-L-fucosidase, putative, N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}acetamide
著者Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
登録日2008-12-22
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
5LJX
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Structure of hantavirus envelope glycoprotein Gc in postfusion conformation in presence of 600 mM KCL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein, POTASSIUM ION, ...
著者Guardado-Calvo, P, Rey, F.A.
登録日2016-07-20
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc.
Plos Pathog., 12, 2016
5LKJ
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Crystal structure of mouse CARM1 in complex with ligand SA684
分子名称: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(2-carbamimidamidoethyl)amino]-2-azanyl-butanoic acid, 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, ...
著者Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
登録日2016-07-22
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献Crystal structure of mouse CARM1 in complex with ligands
To Be Published
2ZYS
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A. Fulgidus lipase with fatty acid fragment and chloride
分子名称: CHLORIDE ION, Lipase, putative, ...
著者Chen, C.K, Ko, T.P, Guo, R.T, Wang, A.H.
登録日2009-01-29
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the alkalohyperthermophilic Archaeoglobus fulgidus lipase contains a unique C-terminal domain essential for long-chain substrate binding.
J.Mol.Biol., 390, 2009
1AJJ
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LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING
分子名称: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, SULFATE ION
著者Fass, D, Blacklow, S.C, Kim, P.S, Berger, J.M.
登録日1997-05-04
公開日1997-07-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module.
Nature, 388, 1997
2MVV
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Solution Structure of the 5-phenyl-3-oxo-pentyl Actinorhodin Acyl Carrier Protein from Streptomyces coelicolor
分子名称: Actinorhodin polyketide synthase acyl carrier protein, N~3~-{(2S)-4-[(dihydroxyphosphanyl)oxy]-2-hydroxy-3,3-dimethylbutanoyl}-N-{2-[(3-oxo-5-phenylpentyl)sulfanyl]ethyl}-beta-alaninamide
著者Dong, X, Bailey, C, Williams, C, Crosby, J, Simpson, T.J, Willis, C.L, Crump, M.P.
登録日2014-10-15
公開日2015-10-21
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献ACP-ligand recognition: Selection of derivatized aromatic biosynthetic intermediates
To be Published
5EYZ
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CRYSTAL STRUCTURE OF THE PTPN4 PDZ DOMAIN COMPLEXED WITH THE TAILORED PEPTIDE CYTO8-RETEV
分子名称: CHLORIDE ION, CYTO8-RETEV, Tyrosine-protein phosphatase non-receptor type 4
著者Maisonneuve, P, Vaney, M.C, Babault, B, Caillet-Saguy, C, Lafon, M, Delepierre, M, Cordier, F, Wolff, N.
登録日2015-11-26
公開日2016-06-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Molecular Basis of the Interaction of the Human Protein Tyrosine Phosphatase Non-receptor Type 4 (PTPN4) with the Mitogen-activated Protein Kinase p38 gamma.
J.Biol.Chem., 291, 2016
1QHK
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N-TERMINAL DOMAIN OF SACCHAROMYCES CEREVISIAE RNASE HI REVEALS A FOLD WITH A RESEMBLANCE TO THE N-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L9
分子名称: PROTEIN (RIBONUCLEASE HI)
著者Evans, S.P, Bycroft, M.
登録日1999-05-17
公開日1999-08-31
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the N-terminal domain of Saccharomyces cerevisiae RNase HI reveals a fold with a strong resemblance to the N-terminal domain of ribosomal protein L9.
J.Mol.Biol., 291, 1999
2ZX5
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alpha-L-fucosidase complexed with inhibitor, F10
分子名称: 3-(1H-indol-3-yl)-N-{[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methylpiperidin-2-yl]methyl}propanamide, Alpha-L-fucosidase, putative
著者Wu, H.-J, Ko, T.-P, Ho, C.-W, Lin, C.-H, Wang, A.H.-J.
登録日2008-12-19
公開日2009-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis of alpha-fucosidase inhibition by iminocyclitols with K(i) values in the micro- to picomolar range.
Angew.Chem.Int.Ed.Engl., 49, 2010
2MP2
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Solution structure of SUMO dimer in complex with SIM2-3 from RNF4
分子名称: E3 ubiquitin-protein ligase RNF4, Small ubiquitin-related modifier 3
著者Xu, Y, Plechanovov, A, Simpson, P, Marchant, J, Leidecker, O, Sebastian, K, Hay, R.T, Matthews, S.J.
登録日2014-05-09
公開日2014-07-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insight into SUMO chain recognition and manipulation by the ubiquitin ligase RNF4.
Nat Commun, 5, 2014

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