Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45697 件

4Q78
DownloadVisualize
BU of 4q78 by Molmil
Structure-assisted design of carborane-based inhibitors of carbonic anhydrase
分子名称: 1-(sulfamoylamino)methyl-1,2-dicarba-closo-dodecaborane, Carbonic anhydrase 2, MERCURIBENZOIC ACID, ...
著者Mader, P, Brynda, J, Rezacova, P.
登録日2014-04-24
公開日2015-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Carborane-based carbonic anhydrase inhibitors: insight into CAII/CAIX specificity from a high-resolution crystal structure, modeling, and quantum chemical calculations.
Biomed Res Int, 2014, 2014
6IF7
DownloadVisualize
BU of 6if7 by Molmil
Crystal Structure of AA10 Lytic Polysaccharide Monooxygenase from Tectaria macrodonta
分子名称: COPPER (II) ION, Chitin binding protein, GLYCEROL, ...
著者Archana, A, Yadav, S.K, Singh, P.K, Vasudev, P.G.
登録日2018-09-18
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Insecticidal fern protein Tma12 is possibly a lytic polysaccharide monooxygenase.
Planta, 249, 2019
7MW1
DownloadVisualize
BU of 7mw1 by Molmil
Crystal structure of the Homo sapiens NUP93-NUP53 complex (NUP93 residues 174-819; NUP53 residues 84-150)
分子名称: Nuclear pore complex protein Nup93, Nucleoporin Nup35
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7MW0
DownloadVisualize
BU of 7mw0 by Molmil
Crystal structure of Homo sapiens NUP93 solenoid (residues 174-819)
分子名称: 1,2-ETHANEDIOL, Nuclear pore complex protein Nup93
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
4BEV
DownloadVisualize
BU of 4bev by Molmil
ATPase crystal structure with bound phosphate analogue
分子名称: COPPER EFFLUX ATPASE, MAGNESIUM ION, TRIFLUOROMAGNESATE
著者Mattle, D, Drachmann, N.D, Liu, X.Y, Gourdon, P, Pedersen, B.P, Morth, P, Wang, J, Nissen, P.
登録日2013-03-12
公開日2014-04-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.583 Å)
主引用文献ATPase Crystal Structure with Bound Phosphate Analogue
To be Published
6RNK
DownloadVisualize
BU of 6rnk by Molmil
Crystal structure of a humanized (K18E, K269N) rat succinate receptor SUCNR1 (GPR91) in complex with a nanobody and antagonist NF-56-EJ40.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-[2-[[3-[4-[(4-methylpiperazin-1-yl)methyl]phenyl]phenyl]carbonylamino]phenyl]ethanoic acid, GLYCEROL, ...
著者Haffke, M, Jaakola, V.-P.
登録日2019-05-08
公開日2019-08-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural basis of species-selective antagonist binding to the succinate receptor.
Nature, 574, 2019
6ROI
DownloadVisualize
BU of 6roi by Molmil
Cryo-EM structure of the partially activated Drs2p-Cdc50p
分子名称: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Timcenko, M, Lyons, J.A, Januliene, D, Ulstrup, J.J, Dieudonne, T, Montigny, C, Ash, M.R, Karlsen, J.L, Boesen, T, Kuhlbrandt, W, Lenoir, G, Moeller, A, Nissen, P.
登録日2019-05-13
公開日2019-07-03
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure and autoregulation of a P4-ATPase lipid flippase.
Nature, 571, 2019
5EX7
DownloadVisualize
BU of 5ex7 by Molmil
Crystal structure of Brat NHL domain in complex with an 8-nt hunchback mRNA
分子名称: Brain tumor protein, RNA (5'-R(P*UP*UP*UP*GP*UP*UP*GP*U)-3')
著者Wang, Y, Yu, Z, Wang, M, Liu, C.P, Yang, N, Xu, R.M.
登録日2015-11-23
公開日2015-12-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Brat NHL domain in complex with an 8-nt hunchback mRNA
To Be Published
6X6F
DownloadVisualize
BU of 6x6f by Molmil
The structure of Pf6r from the filamentous phage Pf6 of Pseudomonas aeruginosa PA01
分子名称: NITRATE ION, Pf6r
著者Michie, K.A, Norrian, P, Duggin, I.G, McDougald, D, Rice, S.A.
登録日2020-05-28
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.735 Å)
主引用文献The Repressor C Protein, Pf4r, Controls Superinfection of Pseudomonas aeruginosa PAO1 by the Pf4 Filamentous Phage and Regulates Host Gene Expression.
Viruses, 13, 2021
5ZXH
DownloadVisualize
BU of 5zxh by Molmil
The structure of MT189-tubulin complex
分子名称: 2-(6-fluoro-3-{[(4-methoxyphenyl)methyl]amino}imidazo[1,2-a]pyridin-2-yl)phenol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Li, Z.P, Wang, Y.X, Meng, T, Yang, J.L, Chen, Q.
登録日2018-05-21
公開日2019-05-22
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Structure of MT189-Tubulin Complex Provides Insights into Drug Design
Lett.Drug Des.Discovery, 2019
6RSK
DownloadVisualize
BU of 6rsk by Molmil
Cytochrome c co-crystallized with 20 eq. sulfonato-calix[8]arene and 15 eq. spermine - structure II
分子名称: Cytochrome c iso-1, HEME C, SPERMINE, ...
著者Engilberge, S, Crowley, P.B.
登録日2019-05-21
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
4PWM
DownloadVisualize
BU of 4pwm by Molmil
Crystal structure of Dickerson Drew Dodecamer with 5-carboxycytosine
分子名称: 5'-[CGCGAATT(5CC)GCG]-3'
著者Szulik, M.W, Pallan, P, Banerjee, S, Voehler, M, Egli, M, Stone, M.P.
登録日2014-03-20
公開日2015-02-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Differential stabilities and sequence-dependent base pair opening dynamics of watson-crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Biochemistry, 54, 2015
7Y4H
DownloadVisualize
BU of 7y4h by Molmil
AcvX from Actinomadura viridis that exhibits deglycosylation activity on lobophorins
分子名称: AcvX
著者Tan, B, Zhang, L.P, Zhang, C.S.
登録日2022-06-14
公開日2023-05-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Widespread Glycosidase Confers Lobophorin Resistance and Host-Dependent Structural Diversity.
Angew.Chem.Int.Ed.Engl., 62, 2023
1BGT
DownloadVisualize
BU of 1bgt by Molmil
CRYSTAL STRUCTURE OF THE DNA MODIFYING ENZYME BETA-GLUCOSYLTRANSFERASE IN THE PRESENCE AND ABSENCE OF THE SUBSTRATE URIDINE DIPHOSPHOGLUCOSE
分子名称: BETA-GLUCOSYLTRANSFERASE
著者Vrielink, A, Rueger, W, Driessen, H.P.C, Freemont, P.S.
登録日1994-06-09
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the DNA modifying enzyme beta-glucosyltransferase in the presence and absence of the substrate uridine diphosphoglucose.
EMBO J., 13, 1994
6EBG
DownloadVisualize
BU of 6ebg by Molmil
Ohr (Organic Hydroperoxide Resistance protein) mutant - C60S interacting with dihydrolipoamide
分子名称: (6S)-6,8-disulfanyloctanamide, Organic hydroperoxide resistance protein
著者Domingos, R.M, Teixeira, R.D, Alegria, T.G.P, Vieira, P.S, Murakami, M.T, Netto, L.E.S.
登録日2018-08-06
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Substrate and product-assisted catalysis: molecular aspects behind structural switches along Organic Hydroperoxide Resistance Protein catalytic cycle
Acs Catalysis, 2020
5NRL
DownloadVisualize
BU of 5nrl by Molmil
Structure of a pre-catalytic spliceosome.
分子名称: 13 kDa ribonucleoprotein-associated protein, 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component, 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component, ...
著者Plaschka, C, Lin, P.-C, Nagai, K.
登録日2017-04-24
公開日2017-05-31
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Structure of a pre-catalytic spliceosome.
Nature, 546, 2017
7WBP
DownloadVisualize
BU of 7wbp by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron variant spike glycoprotein in complex with its receptor human ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Qi, J, Han, P.
登録日2021-12-17
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Receptor binding and complex structures of human ACE2 to spike RBD from omicron and delta SARS-CoV-2.
Cell, 185, 2022
5EZD
DownloadVisualize
BU of 5ezd by Molmil
Crystal structure of a Hepatocyte growth factor activator inhibitor-1 (HAI-1) fragment covering the PKD-like 'internal' domain and Kunitz domain 1
分子名称: ACETATE ION, Kunitz-type protease inhibitor 1, POTASSIUM ION
著者Hong, Z, Andreasen, P.A, Morth, J.P, Jensen, J.K.
登録日2015-11-26
公開日2016-05-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of a Two-domain Fragment of Hepatocyte Growth Factor Activator Inhibitor-1: FUNCTIONAL INTERACTIONS BETWEEN THE KUNITZ-TYPE INHIBITOR DOMAIN-1 AND THE NEIGHBORING POLYCYSTIC KIDNEY DISEASE-LIKE DOMAIN.
J.Biol.Chem., 291, 2016
6RIJ
DownloadVisualize
BU of 6rij by Molmil
CDK2/cyclin A2 in complex with open-ring 5-nitrosopyrimidine inhibitor LC436
分子名称: 4-[[[5-nitroso-2-[[(2~{R})-1-oxidanylbutan-2-yl]amino]-6-(propan-2-ylamino)pyrimidin-4-yl]amino]methyl]phenol, Cyclin-A2, Cyclin-dependent kinase 2, ...
著者Skerlova, J, Rezacova, P, Brynda, J.
登録日2019-04-24
公開日2020-07-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献CDK2/cyclin A2 in complex with open-ring 5-nitrosopyrimidine inhibitor LC436
To Be Published
6A67
DownloadVisualize
BU of 6a67 by Molmil
Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody FLD21.140
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLD21.140 Heavy Chain, FLD21.140 Light Chain, ...
著者Wang, P, Zuo, Y, Sun, J, Zhang, L, Wang, X.
登録日2018-06-26
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Complementary recognition of the receptor-binding site of highly pathogenic H5N1 influenza viruses by two human neutralizing antibodies.
J. Biol. Chem., 293, 2018
8C5H
DownloadVisualize
BU of 8c5h by Molmil
NbSyt1 anti-(rat Synaptotagmin-1) nanobody bound to target cytosolic domain of Synaptotagmin-1
分子名称: CALCIUM ION, GLYCEROL, NbSyt1 nanobody, ...
著者Martinez-Carranza, M, Stenmark, P.
登録日2023-01-09
公開日2023-08-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献A Versatile Synaptotagmin-1 Nanobody Provides Perturbation-Free Live Synaptic Imaging And Low Linkage-Error in Super-Resolution Microscopy.
Small Methods, 7, 2023
7SJQ
DownloadVisualize
BU of 7sjq by Molmil
Ex silico engineering of cystine-dense peptides yielding a potent bispecific T-cell engager
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cystine-dense peptide, GLYCEROL, ...
著者Rupert, P.B, Strong, R.
登録日2021-10-18
公開日2022-06-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ex silico engineering of cystine-dense peptides yielding a potent bispecific T cell engager.
Sci Transl Med, 14, 2022
5AR7
DownloadVisualize
BU of 5ar7 by Molmil
RIP2 Kinase Catalytic Domain (1 - 310) complex with Biaryl Urea
分子名称: 1-(5-TERT-BUTYL-1,2-OXAZOL-3-YL)-3-(4-PYRIDIN-4-YLOXYPHENYL)UREA, RECEPTOR-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2
著者Charnley, A.K, Convery, M.A, Lakdawala Shah, A, Jones, E, Hardwicke, P, Bridges, A, Votta, B.J, Gough, P.J, Marquis, R.W, Bertin, J, Casillas, L.
登録日2015-09-24
公開日2015-10-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Crystal Structures of Human Rip2 Kinase Catalytic Domain Complexed with ATP-Competitive Inhibitors: Foundations for Understanding Inhibitor Selectivity.
Bioorg.Med.Chem., 23, 2015
8C76
DownloadVisualize
BU of 8c76 by Molmil
Light-state 2.5 Angstrom wild-type X-ray crystal structure of the cobalamin binding domain belonging to a light-dependent transcription regulator TtCarH obtained under aerobic conditions from a form 2 crystal illuminated during 5 s
分子名称: COBALAMIN, Probable transcriptional regulator
著者Rios-Santacruz, R, Colletier, J.P, Schiro, G, Weik, M.
登録日2023-01-12
公開日2023-08-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Redox driven B 12 -ligand switch drives CarH photoresponse.
Nat Commun, 14, 2023
6XAC
DownloadVisualize
BU of 6xac by Molmil
Galactose-bound structure of Marinomonas primoryensis PA14 carbohydrate-binding domain
分子名称: Antifreeze protein, CALCIUM ION, beta-D-galactopyranose
著者Guo, S, Davies, P.L.
登録日2020-06-04
公開日2021-06-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation.
Mbio, 12, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon