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PDB: 45697 件

8A1Q
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HIV-1 Integrase Catalytic Core Domain and C-Terminal Domain in Complex with Allosteric Integrase Inhibitor STP0404 (Pirmitegravir)
分子名称: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, 1,2-ETHANEDIOL, Integrase, ...
著者Singer, M.R, Pye, V.E, Cook, N.J, Cherepanov, P.
登録日2022-06-01
公開日2023-02-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献The Drug-Induced Interface That Drives HIV-1 Integrase Hypermultimerization and Loss of Function.
Mbio, 14, 2023
7AQL
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Crystal Structure of an Anti-Plasminogen Activator Inhibitor-1 (PAI-1) scFv antibody fragment (scFv-33H1F7)
分子名称: SULFATE ION, scFv-33H1F7
著者Sillen, M, Weeks, S.D, Strelkov, S.V, Declerck, P.J.
登録日2020-10-22
公開日2021-11-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of an Anti-Plasminogen Activator Inhibitor-1 (PAI-1) scFv antibody fragment (scFv-33H1F7)
To Be Published
8A71
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Crystal structure of right-handed Z-DNA containing 2'-deoxy-L-ribose in complex with the polyamine cadaverine and potassium cations at ultrahigh resolution
分子名称: 5-azaniumylpentylazanium, POTASSIUM ION, Right-handed Z-DNA
著者Drozdzal, P, Manszewski, T, Gilski, M, Brzezinski, K, Jaskolski, M.
登録日2022-06-20
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (0.69 Å)
主引用文献Right-handed Z-DNA at ultrahigh resolution: a tale of two hands and the power of the crystallographic method.
Acta Crystallogr D Struct Biol, 79, 2023
7V05
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Complex of Plasmodium falciparum circumsporozoite protein with 850 Fab
分子名称: 850 Fab Heavy Chain, 850 Fab Light Chain, Circumsporozoite protein
著者Kucharska, I, Prieto, K, Rubinstein, J.L, Julien, J.P.
登録日2022-05-09
公開日2022-11-23
最終更新日2022-12-14
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献High-density binding to Plasmodium falciparum circumsporozoite protein repeats by inhibitory antibody elicited in mouse with human immunoglobulin repertoire.
Plos Pathog., 18, 2022
5MEF
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Cyanothece lipoxygenase 2 (CspLOX2) variant - L304F
分子名称: Arachidonate 15-lipoxygenase, CHLORIDE ION, FE (III) ION, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.357 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
6UVE
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Crystal structure of BCL-XL bound to compound 7: (R)-3-(Benzylthio)-2-(3-(4-chloro-[1,1':2',1'':3'',1'''-quaterphenyl]-4'''-carbonyl)-3-(4-methylbenzyl)ureido)propanoic acid
分子名称: (R)-3-(Benzylthio)-2-(3-(4-chloro-[1,1':2',1'':3'',1'''-quaterphenyl]-4'''-carbonyl)-3-(4-methylbenzyl)ureido)propanoic acid, 1,2-ETHANEDIOL, Bcl-2-like protein 1
著者Roy, M.J, Lessene, G, Czabotar, P.E.
登録日2019-11-02
公開日2021-05-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Structure-Guided Development of Potent Benzoylurea Inhibitors of BCL-X L and BCL-2.
J.Med.Chem., 64, 2021
2JNZ
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BU of 2jnz by Molmil
Solution structure of phl p 3, a major allergen from timothy grass pollen
分子名称: Phl p 3 allergen
著者Schweimer, K, Matecko, I, Roesch, P.
登録日2007-02-15
公開日2008-03-04
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution structure of Phl p 3, a major allergen from timothy grass pollen
Biol.Chem., 389, 2008
5J1W
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Crystal structure of human CLK1 in complex with pyrido[3,4-g]quinazoline derivative ZW31 (compound 14)
分子名称: Dual specificity protein kinase CLK1, GLYCEROL, PHOSPHATE ION, ...
著者Chaikuad, A, Esvan, Y.J, Zeinyeh, W, Boibessot, T, Nauton, L, Thery, V, Loaec, N, Meijer, L, Giraud, F, Moreau, P, Anizon, F, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Knapp, S, Structural Genomics Consortium (SGC)
登録日2016-03-29
公開日2016-05-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Discovery of pyrido[3,4-g]quinazoline derivatives as CMGC family protein kinase inhibitors: Design, synthesis, inhibitory potency and X-ray co-crystal structure.
Eur.J.Med.Chem., 118, 2016
1WAP
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BU of 1wap by Molmil
TRP RNA-BINDING ATTENUATION PROTEIN IN COMPLEX WITH L-TRYPTOPHAN
分子名称: TRP RNA-BINDING ATTENUATION PROTEIN, TRYPTOPHAN
著者Antson, A.A, Dodson, E.J, Gollnick, P.
登録日1995-02-03
公開日1995-06-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of trp RNA-binding attenuation protein.
Nature, 374, 1995
5MH5
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BU of 5mh5 by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-keto-hexanoic acid and NADP+ (1.4 A resolution)
分子名称: 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, MAGNESIUM ION, ...
著者Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
登録日2016-11-23
公開日2018-05-02
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
3IXN
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BU of 3ixn by Molmil
Crystal structure of d(CCGGTACCGG) as B-DNA duplex
分子名称: COBALT (II) ION, DNA (5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3')
著者Venkadesh, S, Mandal, P.K, Gautham, N.
登録日2009-09-04
公開日2010-09-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Crystal Structure of inverted repeat sequence d(CCGGTACCGG)as B-DNA duplex
To be Published
3IYP
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BU of 3iyp by Molmil
The Interaction of Decay-accelerating Factor with Echovirus 7
分子名称: Capsid protein, Complement decay-accelerating factor, LAURIC ACID, ...
著者Plevka, P, Hafenstein, S, Zhang, Y, Harris, K.G, Cifuente, J.O, Bowman, V.D, Chipman, P.R, Lin, F, Medof, D.E, Bator, C.M, Rossmann, M.G.
登録日2010-04-07
公開日2010-11-24
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (7.2 Å)
主引用文献Interaction of decay-accelerating factor with echovirus 7.
J.Virol., 84, 2010
6GRK
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BU of 6grk by Molmil
Structure of the soluble AhlB of the tripartite alpha-pore forming toxin, AHL, from Aeromonas hydrophila.
分子名称: AhlB
著者Churchill-Angus, A.M, Wilson, J.S, Baker, P.J.
登録日2018-06-11
公開日2019-07-03
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Identification and structural analysis of the tripartite alpha-pore forming toxin of Aeromonas hydrophila.
Nat Commun, 10, 2019
4XNL
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X-ray structure of AlgE2
分子名称: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
著者Ma, P, Huang, C.Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M.
登録日2015-01-15
公開日2015-06-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献In meso in situ serial X-ray crystallography of soluble and membrane proteins.
Acta Crystallogr.,Sect.D, 71, 2015
6GN3
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BU of 6gn3 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group P21/n
分子名称: CHLORIDE ION, COBALT (II) ION, DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), ...
著者Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
登録日2018-05-29
公開日2019-09-11
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
6PPW
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BU of 6ppw by Molmil
Crystal structure of NeuB, an N-acetylneuraminate synthase from Neisseria meningitidis, in complex with magnesium and malate
分子名称: D-MALATE, MAGNESIUM ION, N-acetylneuraminate synthase
著者Rosanally, A.Z, Junop, M.S, Berti, P.J.
登録日2019-07-08
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献NeuNAc Oxime: A Slow-Binding and Effectively Irreversible Inhibitor of the Sialic Acid Synthase NeuB.
Biochemistry, 58, 2019
7ZJY
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BU of 7zjy by Molmil
The NMR structure of the MAX67 effector from Magnaporthe Oryzae
分子名称: MAX effector protein
著者Lahfa, M, Padilla, A, de Guillen, K, Pissarra, J, Raji, M, Cesari, S, Kroj, T, Gladieux, P, Roumestand, C, Barthe, P.
登録日2022-04-12
公開日2023-04-26
最終更新日2023-11-08
実験手法SOLUTION NMR
主引用文献1 H, 13 C, 15 N backbone and side-chain NMR assignments for three MAX effectors from Magnaporthe oryzae.
Biomol.Nmr Assign., 16, 2022
7ZK0
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BU of 7zk0 by Molmil
The NMR structure of the MAX60 effector from Magnaporthe Oryzae
分子名称: MAX effector protein
著者Lahfa, M, Padilla, A, de Guillen, K, Pissarra, J, Raji, M, Cesari, S, Kroj, T, Gladieux, P, Roumestand, C, Barthe, P.
登録日2022-04-12
公開日2023-04-26
最終更新日2023-11-08
実験手法SOLUTION NMR
主引用文献1 H, 13 C, 15 N backbone and side-chain NMR assignments for three MAX effectors from Magnaporthe oryzae.
Biomol.Nmr Assign., 16, 2022
4XOA
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Crystal structure of a FimH*DsG complex from E.coli K12 in space group P1
分子名称: FimG, Protein FimH
著者Jakob, R.P, Eras, J, Glockshuber, R, Maier, T.
登録日2015-01-16
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.541 Å)
主引用文献Catch-bond mechanism of the bacterial adhesin FimH.
Nat Commun, 7, 2016
6GUY
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BU of 6guy by Molmil
Room temperature structure of Archaerhodopsin-3 via LCP extruder using synchrotron radiation
分子名称: Archaerhodopsin-3, CALCIUM ION, CHLORIDE ION, ...
著者Moraes, I, Judge, P.J, Axford, D, Bada Juarez, J.F, Vinals, J, Watts, A.
登録日2018-06-19
公開日2019-10-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Room temperature structure of Archaerhodopsin-3 via LCP extruder using synchrotron radiation
To Be Published
8WCC
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BU of 8wcc by Molmil
Cryo-EM structure of the CHA-bound mTAAR1 complex
分子名称: CYCLOHEXYLAMMONIUM ION, Trace amine-associated receptor 1
著者Rong, N.K, Guo, L.L, Zhang, M.H, Li, Q, Yang, F, Sun, J.P.
登録日2023-09-11
公開日2023-12-27
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural and signaling mechanisms of TAAR1 enabled preferential agonist design.
Cell, 186, 2023
5LYC
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Cytochrome c in complex with phosphonato-calix[6]arene
分子名称: Cytochrome c iso-1, HEME C, SULFATE ION, ...
著者Rennie, M.L, Crowley, P.B.
登録日2016-09-27
公開日2017-05-10
最終更新日2019-09-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Protein Dimerization on a Phosphonated Calix[6]arene Disc.
Angew. Chem. Int. Ed. Engl., 56, 2017
6VP1
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Artificial Metalloproteins with Dinuclear Iron Centers
分子名称: ACETATE ION, Streptavidin, {N-(4-{bis[(pyridin-2-yl-kappaN)methyl]amino-kappaN}butyl)-5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide}iron(3+)
著者Miller, K.R, Follmer, A.H, Jasniewski, A.J, Sabuncu, S, Biswas, S, Albert, T, Hendrich, M.P, Moenne-Loccoz, P, Borovik, A.S.
登録日2020-02-01
公開日2021-02-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.
J.Am.Chem.Soc., 143, 2021
3J1A
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HK97-like fold fitted into 3D reconstruction of bacteriophage CW02
分子名称: capsid protein
著者Shen, P.S, Domek, M.J, Sanz-Garcia, E, Makaju, A, Taylor, R, Culumber, M, Breakwell, D.P, Prince, J.T, Belnap, D.M.
登録日2012-01-31
公開日2012-05-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup.
J.Virol., 86, 2012
7B3H
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Notum complex with ARUK3003909
分子名称: 1,2-ETHANEDIOL, 6-((3-(trifluoromethoxy)phenyl)thio)-[1,2,4]triazolo[4,3-b]pyridazin-3(2H)-one, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y, Fish, P.
登録日2020-11-30
公開日2021-12-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Virtual Screening Directly Identifies New Fragment-Sized Inhibitors of Carboxylesterase Notum with Nanomolar Activity.
J.Med.Chem., 65, 2022

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