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PDB: 45697 件

7ZYY
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Cryo-EM structure of Lactococcus lactis pyruvate carboxylase with acetyl-CoA
分子名称: ACETYL COENZYME *A, ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, ...
著者Lopez-Alonso, J.P, Lazaro, M, Gil, D, Choi, P.H, Tong, L, Valle, M.
登録日2022-05-25
公開日2022-10-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.12 Å)
主引用文献CryoEM structural exploration of catalytically active enzyme pyruvate carboxylase.
Nat Commun, 13, 2022
6P3J
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Crystal structure of LigU
分子名称: (4E)-oxalomesaconate Delta-isomerase, CALCIUM ION, CHLORIDE ION, ...
著者Cory, S.A, Hogancamp, T.N, Raushel, F.M, Barondeau, D.P.
登録日2019-05-23
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structure and Chemical Reaction Mechanism of LigU, an Enzyme That Catalyzes an Allylic Isomerization in the Bacterial Degradation of Lignin.
Biochemistry, 58, 2019
5FTQ
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Crystal structure of the ALK kinase domain in complex with Cmpd 17
分子名称: ALK TYROSINE KINASE RECEPTOR, GLYCEROL, N-[5-(3,5-DIFLUOROBENZYL)-1H-INDAZOL-3-YL]-2-[(4-HYDROXYCYCLOHEXYL)AMINO]-4-(4-METHYLPIPERAZIN-1-YL) BENZAMIDE
著者Bossi, R, Canevari, G, Fasolini, M, Menichincheri, M, Ardini, E, Magnaghi, P, Avanzi, N, Banfi, P, Buffa, L, Ceriani, L, Colombo, M, Corti, L, Donati, D, Felder, E, Fiorelli, C, Fiorentini, F, Galvani, A, Isacchi, A, Lombardi Borgia, A, Marchionni, C, Nesi, M, Orrenius, C, Panzeri, A, Perrone, E, Pesenti, E, Rusconi, L, Saccardo, M.B, Vanotti, E, Orsini, P.
登録日2016-01-14
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of Entrectinib: A New 3-Aminoindazole as a Potent Anaplastic Lymphoma Kinase (Alk), C-Ros Oncogene 1 Kinase (Ros1), and Pan-Tropomyosin Receptor Kinases (Pan-Trks) Inhibitor.
J.Med.Chem., 59, 2016
7SO0
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Crystal Structure of the Engineered Tick Evasin EVA-P974(F31A) Complexed to Human Chemokine CCL2
分子名称: C-C motif chemokine 2, Evasin P974
著者Bhusal, R.P, Devkota, S.R, Aryal, P, Wilce, M.C.J, Stone, M.J.
登録日2021-10-28
公開日2022-03-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structure-guided engineering of tick evasins for targeting chemokines in inflammatory diseases.
Proc.Natl.Acad.Sci.USA, 119, 2022
8PRK
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THE R78K AND D117E ACTIVE SITE VARIANTS OF SACCHAROMYCES CEREVISIAE SOLUBLE INORGANIC PYROPHOSPHATASE: STRUCTURAL STUDIES AND MECHANISTIC IMPLICATIONS
分子名称: MANGANESE (II) ION, PHOSPHATE ION, PROTEIN (INORGANIC PYROPHOSPHATASE)
著者Tuominen, V, Heikinheimo, P, Kajander, T, Torkkel, T, Hyytia, T, Kapyla, J, Lahti, R, Cooperman, B.S, Goldman, A.
登録日1998-09-16
公開日1998-12-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The R78K and D117E active-site variants of Saccharomyces cerevisiae soluble inorganic pyrophosphatase: structural studies and mechanistic implications.
J.Mol.Biol., 284, 1998
7SPA
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Chlorella virus Hyaluronan Synthase in the GlcNAc-primed, channel-open state
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, ...
著者Maloney, F.P, Kuklewicz, J, Zimmer, J.
登録日2021-11-02
公開日2022-04-06
最終更新日2022-04-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure, substrate recognition and initiation of hyaluronan synthase.
Nature, 604, 2022
5J5V
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CdiA-CT from uropathogenic Escherichia coli in complex with cognate immunity protein and CysK
分子名称: Cysteine synthase A, Immunity protein CdiI, tRNA nuclease CdiA
著者Goulding, C.W, Johnson, P.M, Morse, R.P.
登録日2016-04-04
公開日2016-07-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Unraveling the essential role of CysK in CDI toxin activation.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
7SP6
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Chlorella virus hyaluronan synthase
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL HEMISUCCINATE, Hyaluronan synthase, ...
著者Maloney, F.P, Kuklewicz, J, Zimmer, J.
登録日2021-11-02
公開日2022-04-06
最終更新日2022-04-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure, substrate recognition and initiation of hyaluronan synthase.
Nature, 604, 2022
7ATG
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Crystal structure of Z-DNA in complex with putrescinium and potassium cations at ultrahigh-resolution
分子名称: 4-azaniumylbutylazanium, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), POTASSIUM ION
著者Drozdzal, P, Gilski, M, Jaskolski, M.
登録日2020-10-30
公開日2021-08-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.6 Å)
主引用文献Crystal structure of Z-DNA in complex with the polyamine putrescine and potassium cations at ultra-high resolution.
Acta Crystallogr.,Sect.B, 77, 2021
7SP8
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Chlorella virus Hyaluronan Synthase bound to UDP-GlcNAc
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL HEMISUCCINATE, Hyaluronan synthase, ...
著者Maloney, F.P, Kuklewicz, J, Zimmer, J.
登録日2021-11-02
公開日2022-04-06
最終更新日2022-04-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure, substrate recognition and initiation of hyaluronan synthase.
Nature, 604, 2022
7ZUR
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Four carbons pendant pyridine derivative of the natural alkaloid Berberine as Human Telomeric G-quadruplex Binder
分子名称: 16,17-dimethoxy-21-(4-pyridin-4-ylbutyl)-5,7-dioxa-13$l^{4}-azapentacyclo[11.8.0.0^{2,10}.0^{4,8}.0^{15,20}]henicosa-1(21),2(10),3,8,13,15,17,19-octaene, DNA TAGGGTTAGGGT, POTASSIUM ION
著者Bazzicalupi, C, Ferraroni, M, Gratteri, P, Papi, F.
登録日2022-05-13
公開日2022-12-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Probing the Efficiency of 13-Pyridylalkyl Berberine Derivatives to Human Telomeric G-Quadruplexes Binding: Spectroscopic, Solid State and In Silico Analysis.
Int J Mol Sci, 23, 2022
6V43
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Crystal structure of the flavin oxygenase with cofactor and substrate bound involved in folate catabolism
分子名称: FAD/FMN-containing dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, pteridine-2,4(1H,3H)-dione
著者Begley, T.P, Adak, S, Zhao, B, Li, P.
登録日2019-11-27
公開日2020-12-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献A novel flavoenzyme catalyzed Baeyer-Villiger type rearrangement in bacterial folic acid catabolic pathway
To Be Published
7SP7
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Chlorella virus hyaluronan synthase inhibited by UDP
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL HEMISUCCINATE, Hyaluronan synthase, ...
著者Maloney, F.P, Kuklewicz, J, Zimmer, J.
登録日2021-11-02
公開日2022-04-06
最終更新日2022-04-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure, substrate recognition and initiation of hyaluronan synthase.
Nature, 604, 2022
8TX5
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BU of 8tx5 by Molmil
Crystal structure of an engineered variant of galactose oxidase, GOaseRd4BB, from Fusarium graminearum
分子名称: COPPER (II) ION, GLYCEROL, Galactose oxidase
著者Selvaraj, B, Orth, P.
登録日2023-08-22
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Development of a Biocatalytic Aerobic Oxidation for the Manufacturing Route to Islatravir
Chemrxiv, 2023
6X8P
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Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein NPND peptide
分子名称: 1,2-ETHANEDIOL, 3D11 Fab heavy chain, 3D11 Fab light chain, ...
著者Thai, E, Julien, J.P.
登録日2020-06-01
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structural ordering of the Plasmodium berghei circumsporozoite protein repeats by inhibitory antibody 3D11.
Elife, 9, 2020
5F96
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Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibody CH235.12 in complex with HIV-1 clade A/E 93TH057 gp120
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEAVY CHAIN OF ANTIBODY CH235.12, ...
著者Zhou, T, Kwong, P.D.
登録日2015-12-09
公開日2016-03-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2407 Å)
主引用文献Maturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody.
Cell, 165, 2016
6XMR
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X-ray crystallographic structure model of Lactococcus lactis prolidase mutant H38S
分子名称: Aminopeptidase P family protein, MANGANESE (II) ION
著者Xu, S, Grochulski, P, Tanaka, T.
登録日2020-06-30
公開日2020-07-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
5FBX
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BU of 5fbx by Molmil
Crystal structure of the first bromodomain of human BRD4 in complex with PNZ5 isoxazole inhibitor
分子名称: (3~{S})-5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-methyl-3-phenyl-3~{H}-isoindol-1-one, Bromodomain-containing protein 4
著者Tallant, C, Clark, P.G.K, Siejka, P, Fedorov, O, Nowak, R, Srikannathasan, V, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Muller, S, Brennan, P.E, Dixon, D, Knapp, S.
登録日2015-12-14
公開日2015-12-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of the first bromodomain of human BRD4 in complex with PNZ5 isoxazole inhibitor
To Be Published
7AGJ
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Ribonucleotide Reductase R1 protein from Aquifex aeolicus
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Rehling, D, Scaletti, E.R, Stenmark, P.
登録日2020-09-22
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and Biochemical Investigation of Class I Ribonucleotide Reductase from the Hyperthermophile Aquifex aeolicus.
Biochemistry, 61, 2022
8Q0P
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Crystal Structure of an N-terminal Domain of Variant Surface Glycoprotein 21 (VSG21) of Trypanosome brucei brucei Lister 427
分子名称: Variant surface glycoprotein MITat 1.21
著者Zeelen, J.P, Stebbins, C.E.
登録日2023-07-28
公開日2023-09-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献A structural classification of the variant surface glycoproteins of the African trypanosomey.
Plos Negl Trop Dis, 17, 2023
7ZLJ
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Cryo-EM structure of C-mannosyltransferase CeDPY19, in ternary complex with Dol25-P-C-Man and acceptor peptide, bound to CMT2-Fab and anti-Fab nanobody
分子名称: Anti-Fab nanobody, C-mannosyltransferase dpy-19, CMT2-Fab heavy chain, ...
著者Bloch, J.S, Mao, R, Mukherjee, S, Boilevin, J, Irobalieva, R, Darbre, T, Reymond, J.L, Kossiakoff, A.A, Goddard-Borger, E.D, Locher, K.P.
登録日2022-04-15
公開日2023-01-11
最終更新日2023-05-10
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Structure, sequon recognition and mechanism of tryptophan C-mannosyltransferase.
Nat.Chem.Biol., 19, 2023
3IT8
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Crystal structure of TNF alpha complexed with a poxvirus MHC-related TNF binding protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2L protein, Tumor necrosis factor
著者Yang, Z, West Jr, A.P, Bjorkman, P.J.
登録日2009-08-27
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of TNFalpha complexed with a poxvirus MHC-related TNF binding protein
Nat.Struct.Mol.Biol., 16, 2009
6XIF
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PCSK9(deltaCRD) in complex with cyclic peptide 83
分子名称: GLYCEROL, Peptide 83, Proprotein convertase subtilisin/kexin type 9
著者Orth, P.
登録日2020-06-19
公開日2020-11-18
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.774 Å)
主引用文献Series of Novel and Highly Potent Cyclic Peptide PCSK9 Inhibitors Derived from an mRNA Display Screen and Optimized via Structure-Based Design.
J.Med.Chem., 63, 2020
6P2L
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Crystal structure of Niastella koreensis GH74 (NkGH74) enzyme
分子名称: CHLORIDE ION, Glycosyl hydrolase BNR repeat-containing protein, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
著者Stogios, P.J, Skarina, T, Arnal, G, Brumer, H, Savchenko, A.
登録日2019-05-21
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74.
J.Biol.Chem., 294, 2019
3ISS
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BU of 3iss by Molmil
Crystal structure of enolpyruvyl-UDP-GlcNAc synthase (MurA):UDP-N-acetylmuramic acid:phosphite from Escherichia coli
分子名称: PHOSPHITE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
著者Jackson, S.G, Zhang, F, Chindemi, P, Junop, M.S, Berti, P.J.
登録日2009-08-27
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Evidence of Kinetic Control of Ligand Binding and Staged Product Release in MurA (Enolpyruvyl UDP-GlcNAc Synthase)-Catalyzed Reactions .
Biochemistry, 48, 2009

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