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PDB: 1191 results

2L9E
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Solution Structure of the human Anti-codon Stem and loop(hASL) of transfer RNA Lysine 3 (tRNALys3)
Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*(70U)P*UP*UP*(12A)P*AP*UP*CP*UP*GP*C)-3')
Authors:Vendeix, F.A.P, Murphy IV, F.V, Cantara, W, Leszczynska, G, Gustilo, E.M, Sproat, B, Malkiewicz, A.A.P, Agris, P.F.
Deposit date:2011-02-08
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the human Anti-codon Stem and loop(hASL) of transfer RNA Lysine 3 (tRNALys3)
To be Published
5IRR
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Crystal structure of Septin GTPase domain from Chlamydomonas reinhardtii
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Septin-like protein
Authors:Pinto, A.P.A, Pereira, H.M, Navarro, M.V.A.S, Brandao-Neto, J, Garratt, R.C, Araujo, A.P.U.
Deposit date:2016-03-14
Release date:2017-04-26
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Filaments and fingers: Novel structural aspects of the single septin from Chlamydomonas reinhardtii.
J. Biol. Chem., 292, 2017
3T1Y
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Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Vendeix, F.A.P, Cantara, W, Leszczynska, G, Gustilo, E.M, Sproat, B, Malkiewicz, A.A.P, Agris, P.F.
Deposit date:2011-07-22
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Human tRNA(Lys3)(UUU) Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto-Enol Tautomerism.
J.Mol.Biol., 416, 2012
3T1H
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Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin
Descriptor: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Vendeix, F.A.P, Cantara, W, Leszczynska, G, Gustilo, E.M, Sproat, B, Malkiewicz, A.A.P, Agris, P.F.
Deposit date:2011-07-21
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Human tRNA(Lys3)(UUU) Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto-Enol Tautomerism.
J.Mol.Biol., 416, 2012
4WCT
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The crystal structure of Fructosyl amine: oxygen oxidoreductase (Amadoriase I) from Aspergillus fumigatus
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fructosyl amine:oxygen oxidoreductase
Authors:Rigoldi, F, Gautieri, A, Dalle Vedove, A, Lucarelli, A.P, Vesentini, S, Parisini, E.
Deposit date:2014-09-05
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal structure of the deglycating enzyme Amadoriase I in its free form and substrate-bound complex.
Proteins, 84, 2016
6D6Y
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AprA Methyltransferase 2 - GNAT didomain in complex with SAH
Descriptor: AprA Methyltransferase 2, S-ADENOSYL-L-HOMOCYSTEINE, trimethylamine oxide
Authors:Sikkema, A.P, Smith, J.L.
Deposit date:2018-04-23
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Biosynthesis of t-Butyl in Apratoxin A: Functional Analysis and Architecture of a PKS Loading Module.
ACS Chem. Biol., 13, 2018
4FA3
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Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with (R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid (86)
Descriptor: (3R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Turnbull, A.P, Jamieson, S.M.F, Brooke, D.G, Heinrich, D, Atwell, G.J, Silva, S, Hamilton, E.J, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Flanagan, J.U, Denny, W.A.
Deposit date:2012-05-21
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:3-(3,4-Dihydroisoquinolin-2(1H)-ylsulfonyl)benzoic acids; a New Class of Highly Potent and Selective Inhibitors of the Type 5 17-beta-hydroxysteroid Dehydrogenase AKR1C3
J.Med.Chem., 55, 2012
6ECA
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Lactobacillus rhamnosus Beta-glucuronidase
Descriptor: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Biernat, K.A, Pellock, S.J, Bhatt, A.P, Bivins, M.M, Walton, W.G, Tran, B.N.T, Wei, L, Snider, M.C, Cesmat, A.P, Tripathy, A, Erie, D.A, Redinbo, M.R.R.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.853 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
8PAZ
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OXIDIZED NATIVE PSEUDOAZURIN FROM A. FAECALIS
Descriptor: COPPER (II) ION, PSEUDOAZURIN
Authors:Adman, E.T, Libeu, C.A.P.
Deposit date:1997-02-24
Release date:1997-08-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Site-directed mutants of pseudoazurin: explanation of increased redox potentials from X-ray structures and from calculation of redox potential differences.
Biochemistry, 36, 1997
6FAD
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BU of 6fad by Molmil
SR protein kinase 1 (SRPK1) in complex with the RGG-box of HSV1 ICP27
Descriptor: PHOSPHATE ION, SRSF protein kinase 1, mRNA export factor
Authors:Tunnicliffe, R.B, Levy, C, Mould, A.P, Mckenzie, E.A, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2017-12-15
Release date:2019-09-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Molecular Mechanism of SR Protein Kinase 1 Inhibition by the Herpes Virus Protein ICP27.
Mbio, 10, 2019
1G0X
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BU of 1g0x by Molmil
CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAIN OF LIR-1 (ILT2)
Descriptor: LEUCOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR-1
Authors:Chapman, T.L, Heikema, A.P, West Jr, A.P, Bjorkman, P.J.
Deposit date:2000-10-09
Release date:2001-01-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and ligand binding properties of the D1D2 region of the inhibitory receptor LIR-1 (ILT2).
Immunity, 13, 2000
4OY9
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Crystal structure of human P-Cadherin EC1-EC2 in closed conformation
Descriptor: CALCIUM ION, Cadherin-3
Authors:Dalle Vedove, A, Lucarelli, A.P, Nardone, V, Matino, A, Parisini, E.
Deposit date:2014-02-11
Release date:2015-04-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The X-ray structure of human P-cadherin EC1-EC2 in a closed conformation provides insight into the type I cadherin dimerization pathway.
Acta Crystallogr.,Sect.F, 71, 2015
1VM1
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STRUCTURE OF SHV-1 BETA-LACTAMASE INHIBITED BY TAZOBACTAM
Descriptor: ACRYLIC ACID, BETA-LACTAMASE SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE, ...
Authors:Kuzin, A.P, Nukaga, M, Nukaga, Y, Hujer, A, Bonomo, R.A, Knox, J.R.
Deposit date:2004-08-27
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Inhibition of the SHV-1 beta-lactamase by sulfones: crystallographic observation of two reaction intermediates with tazobactam.
Biochemistry, 40, 2001
4OPH
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BU of 4oph by Molmil
X-ray structure of full-length H6N6 NS1
Descriptor: Nonstructural protein 1
Authors:Carrillo, B, Choi, J.M, Bornholdt, Z.A, Sankaran, S, Rice, A.P, Prasad, B.V.V.
Deposit date:2014-02-05
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.158 Å)
Cite:The Influenza A Virus Protein NS1 Displays Structural Polymorphism.
J.Virol., 88, 2014
1W2Z
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BU of 1w2z by Molmil
PSAO and Xenon
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AMINE OXIDASE, COPPER CONTAINING, ...
Authors:Duff, A.P, Trambaiolo, D.M, Cohen, A.E, Ellis, P.J, Juda, G.A, Shepard, E.M, Langley, D.B, Dooley, D.M, Freeman, H.C, Guss, J.M.
Deposit date:2004-07-11
Release date:2004-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Using Xenon as a Probe for Dioxygen-Binding Sites in Copper Amine Oxidases.
J.Mol.Biol., 344, 2004
3KVP
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BU of 3kvp by Molmil
Crystal Structure of Uncharacterized protein ymzC Precursor from Bacillus subtilis, Northeast Structural Genomics Consortium Target SR378A
Descriptor: ACETIC ACID, Uncharacterized protein ymzC
Authors:Kuzin, A.P, Chen, Y, Seetharaman, J, Afonine, P, Fang, F, Xiao, R, Cunningham, K, Ma, L, Chen, C.X, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-11-30
Release date:2010-02-02
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.404 Å)
Cite:Northeast Structural Genomics Consortium Target SR378A
To be Published
7NEE
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BU of 7nee by Molmil
Inhibitor Complex with Thrombin Activatable Fibrinolysis inhibitor (TAFIa)
Descriptor: (1R,3S)-3-(4-ammoniobutyl)-1-benzyl-1,4-azaphosphinan-1-ium-3-carboxylate 4,4-dioxide, Carboxypeptidase B2, ZINC ION
Authors:Brown, D.G, Schaffner, A.P, Gloanec, P, Raimbaud, E, Vuillard, L.M.
Deposit date:2021-02-03
Release date:2021-04-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Phosphinanes and Azaphosphinanes as Potent and Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor (TAFIa).
J.Med.Chem., 64, 2021
7NEU
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BU of 7neu by Molmil
Inhibitor Complex with Thrombin Activatable Fibrinolysis Inhibitor (TAFIa)
Descriptor: (1R,3S)-3-(4-ammoniobutyl)-1-(4-fluoro-2-(1-methyl-1H-imidazol-5-yl)benzyl)-1,4-azaphosphinan-1-ium-3-carboxylate 4,4-dioxide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brown, D.G, Schaffner, A.P, Vuillard, L.M, Gloanec, P, Raimbauld, E.
Deposit date:2021-02-04
Release date:2021-04-07
Last modified:2021-04-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Phosphinanes and Azaphosphinanes as Potent and Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor (TAFIa).
J.Med.Chem., 64, 2021
3L6I
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BU of 3l6i by Molmil
Crystal structure of the uncharacterized lipoprotein yceb from e. coli at the resolution 2.0a. northeast structural genomics consortium target er542
Descriptor: SODIUM ION, Uncharacterized lipoprotein yceB
Authors:Kuzin, A.P, Neely, H, Seetharaman, J, Chen, C.X, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-12-23
Release date:2010-01-26
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Crystal structure of the uncharacterized lipoprotein yceb from e. coli at the resolution 2.0a. northeast structural genomics consortium target er542
To be Published
8G4K
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BU of 8g4k by Molmil
Complex of TbRII mini protein binder bound to the TbRII ECD
Descriptor: 5HCS_TGFBR2_1, SULFATE ION, TGF-beta receptor type-2
Authors:Schwartze, T.S, Hinck, A.P.
Deposit date:2023-02-09
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Computational Design of High Affinity Binders to Convex Protein Target Sites
To be Published
8OH4
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BU of 8oh4 by Molmil
Subtomogram averaging structure of cofilactin filament inside microtubule lumen of Drosophila S2 cell protrusion.
Descriptor: Actin-5C, Cofilin/actin-depolymerizing factor homolog
Authors:Ventura Santos, C, Carter, A.P.
Deposit date:2023-03-20
Release date:2023-05-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (16.5 Å)
Cite:CryoET shows cofilactin filaments inside the microtubule lumen.
Biorxiv, 2023
1URK
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BU of 1urk by Molmil
SOLUTION STRUCTURE OF THE AMINO TERMINAL FRAGMENT OF UROKINASE-TYPE PLASMINOGEN ACTIVATOR
Descriptor: PLASMINOGEN ACTIVATOR, alpha-L-fucopyranose
Authors:Hansen, A.P, Petros, A.M, Meadows, R.P, Nettesheim, D.G, Mazar, A.P, Olejniczak, E.T, Xu, R.X, Pederson, T.M, Henkin, J, Fesik, S.W.
Deposit date:1994-01-10
Release date:1995-05-08
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:Solution structure of the amino-terminal fragment of urokinase-type plasminogen activator.
Biochemistry, 33, 1994
7R7G
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BU of 7r7g by Molmil
Synechococcus Olefin Synthase FAAL domain A229I/R336A in complex with palmitoyl adenylate and pyrophosphate
Descriptor: ACETATE ION, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published
7R7F
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Synechococcus Olefin Synthase FAAL domain R336A in complex with stearoyl adenylate and pyrophosphate
Descriptor: ACETATE ION, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published
7R7E
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Synechococcus Olefin Synthase FAAL domain in complex with AMP and pyrophosphate
Descriptor: ACETATE ION, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Sikkema, A.P, Strugis, R.M, Smith, J.L.
Deposit date:2021-06-24
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:An electrostatic fatty acid selection mechanism by the Olefin Synthase FAAL domain from Synechococcus sp. PCC7002
To Be Published

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