Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 45955 results

6FJO
DownloadVisualize
BU of 6fjo by Molmil
Adenovirus species 26 knob protein, very high resolution
Descriptor: Fiber, GLUTAMIC ACID, GLYCEROL, ...
Authors:Rizkallah, P.J, Parker, A.L, Baker, A.T.
Deposit date:2018-01-22
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Human adenovirus type 26 uses sialic acid-bearing glycans as a primary cell entry receptor.
Sci Adv, 5, 2019
4QII
DownloadVisualize
BU of 4qii by Molmil
Crystal Structure of type II MenB from Mycobacteria tuberculosis
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, Salicylyl CoA, TRIETHYLENE GLYCOL
Authors:Song, H.G, Tse, Y.S, Sung, H.P, Guo, Z.H.
Deposit date:2014-05-31
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Ligand-dependent active-site closure revealed in the crystal structure of Mycobacterium tuberculosis MenB complexed with product analogues
Acta Crystallogr.,Sect.D, 70, 2014
6HGS
DownloadVisualize
BU of 6hgs by Molmil
Crystal Structure of Human APRT wild type in complex with GMP
Descriptor: Adenine phosphoribosyltransferase, GUANOSINE-5'-MONOPHOSPHATE
Authors:Nioche, P, Huyet, J, Ozeir, M.
Deposit date:2018-08-23
Release date:2019-07-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for substrate selectivity and nucleophilic substitution mechanisms in human adenine phosphoribosyltransferase catalyzed reaction.
J.Biol.Chem., 294, 2019
1D27
DownloadVisualize
BU of 1d27 by Molmil
HIGH-RESOLUTION STRUCTURE OF A MUTAGENIC LESION IN DNA
Descriptor: DNA (5'-D(*CP*GP*CP*(6OG)P*AP*AP*TP*TP*TP*GP*CP*G)-3')
Authors:Leonard, G.A, Thomson, J, Watson, W.P, Brown, T.
Deposit date:1991-04-22
Release date:1992-04-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structure of a mutagenic lesion in DNA.
Proc.Natl.Acad.Sci.USA, 87, 1990
6MEH
DownloadVisualize
BU of 6meh by Molmil
Crystal structure of broadly neutralizing antibody HEPC74 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E2 glycoprotein, ...
Authors:Flyak, A.I, Bjorkman, P.J.
Deposit date:2018-09-06
Release date:2018-11-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:HCV Broadly Neutralizing Antibodies Use a CDRH3 Disulfide Motif to Recognize an E2 Glycoprotein Site that Can Be Targeted for Vaccine Design.
Cell Host Microbe, 24, 2018
5NOD
DownloadVisualize
BU of 5nod by Molmil
PASTA subunit 4 of Streptococcus pneumoniae STKP crystallized with PEG and succinate
Descriptor: Serine/threonine-protein kinase StkP
Authors:Galisson, F, Gueguen-Chaignon, V, Gouet, P, Grangeasse, C, Zucchini, L.
Deposit date:2017-04-12
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:PASTA repeats of the protein kinase StkP interconnect cell constriction and separation of Streptococcus pneumoniae.
Nat Microbiol, 3, 2018
8U3H
DownloadVisualize
BU of 8u3h by Molmil
Structure of Fmoc-Leu-OH bound Sialin
Descriptor: Fluorenylmethyloxycarbonyl chloride, LEUCINE, Sialin
Authors:Schmiege, P, Li, X.
Deposit date:2023-09-07
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structure of Fmoc-Leu-OH bound Sialin
To Be Published
8U3F
DownloadVisualize
BU of 8u3f by Molmil
Structure of Apo Sialin R168K mutant
Descriptor: Sialin
Authors:Schmiege, P, Li, X.
Deposit date:2023-09-07
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Structure of Apo Sialin R168K mutant
To Be Published
6W5H
DownloadVisualize
BU of 6w5h by Molmil
1.85 A resolution structure of Norovirus 3CL protease in complex with inhibitor 5d
Descriptor: 2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate, 3C-LIKE PROTEASE
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2020-03-13
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
1D6S
DownloadVisualize
BU of 1d6s by Molmil
CRYSTAL STRUCTURE OF THE K41A MUTANT OF O-ACETYLSERINE SULFHYDRYLASE COMPLEXED IN EXTERNAL ALDIMINE LINKAGE WITH METHIONINE
Descriptor: METHIONINE, O-ACETYLSERINE SULFHYDRYLASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Burkhard, P, Tai, C.H, Ristroph, C.M, Cook, P.F, Jansonius, J.N.
Deposit date:1999-10-15
Release date:2000-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand binding induces a large conformational change in O-acetylserine sulfhydrylase from Salmonella typhimurium.
J.Mol.Biol., 291, 1999
6HWM
DownloadVisualize
BU of 6hwm by Molmil
Structure of Thermus thermophilus ClpP in complex with bortezomib
Descriptor: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE
Authors:Felix, J, Schanda, P, Fraga, H, Morlot, C.
Deposit date:2018-10-12
Release date:2019-09-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
3OS8
DownloadVisualize
BU of 3os8 by Molmil
Estrogen Receptor
Descriptor: 4-[1-benzyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
Authors:Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2010-09-08
Release date:2010-11-10
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (2.031 Å)
Cite:Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
6M65
DownloadVisualize
BU of 6m65 by Molmil
Crystal structure of Mycobacterium smegmatis MutT1 in complex with GMPPNP (GDP)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Raj, P, Karthik, S, Arif, S.M, Varshney, U, Vijayan, M.
Deposit date:2020-03-13
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Plasticity, ligand conformation and enzyme action of Mycobacterium smegmatis MutT1.
Acta Crystallogr D Struct Biol, 76, 2020
1TFD
DownloadVisualize
BU of 1tfd by Molmil
HIGH-RESOLUTION X-RAY STUDIES ON RABBIT SERUM TRANSFERRIN: PRELIMINARY STRUCTURE ANALYSIS OF THE N-TERMINAL HALF-MOLECULE AT 2.3 ANGSTROMS RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, TRANSFERRIN
Authors:Sarra, R, Lindley, P.F.
Deposit date:1990-08-16
Release date:1993-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-Resolution X-Ray Studies on Rabbit Serum Transferrin: Preliminary Structure Analysis of the N-Terminal Half-Molecule at 2.3 Angstroms Resolution
Acta Crystallogr.,Sect.B, 46, 1990
6W8T
DownloadVisualize
BU of 6w8t by Molmil
Crystal structure of metacaspase 4 from Arabidopsis (microcrystals treated with calcium)
Descriptor: Metacaspase-4, SULFATE ION
Authors:Zhu, P, Yu, X.H, Wang, C, Zhang, Q, Liu, W, McSweeney, S, Shanklin, J, Lam, E, Liu, Q.
Deposit date:2020-03-21
Release date:2020-05-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for Ca2+-dependent activation of a plant metacaspase.
Nat Commun, 11, 2020
1D9H
DownloadVisualize
BU of 1d9h by Molmil
Structural origins of the exonuclease resistance of a zwitterionic RNA
Descriptor: DNA/RNA (5'-D(*GP*CP*GP*TP*AP)-R(*(U31)P)-D(*AP*CP*GP*C)-3')
Authors:Teplova, M, Wallace, S.T, Tereshko, V, Minasov, G, Simons, A.M, Cook, P.D, Manoharan, M, Egli, M.
Deposit date:1999-10-27
Release date:1999-12-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural origins of the exonuclease resistance of a zwitterionic RNA
Proc.Natl.Acad.Sci.USA, 96, 1999
4QNN
DownloadVisualize
BU of 4qnn by Molmil
Crystal Structure of phospholipase A 1 from hornet(Vespa basalis) venom
Descriptor: CHLORIDE ION, MERCURY (II) ION, Phospholipase A 1 from hornet(Vespa basalis) venom
Authors:Chuang, C.Y, Ko, T.P, Wang, A.H.J, Hou, M.H.
Deposit date:2014-06-18
Release date:2015-06-24
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of phospholipase A 1 from hornet(Vespa basalis) venom
To be Published
4MDO
DownloadVisualize
BU of 4mdo by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, DI(HYDROXYETHYL)ETHER, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4CPG
DownloadVisualize
BU of 4cpg by Molmil
Solution structure of the SGTA N-terminal domain
Descriptor: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA
Authors:Darby, J.F, Krysztofinska, E.M, Simpson, P.J, Isaacson, R.L.
Deposit date:2014-02-06
Release date:2014-12-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Sgta Dimerisation Domain and Investigation of its Interactions with the Ubiquitin-Like Domains of Bag6 and Ubl4A.
Plos One, 9, 2014
8DGJ
DownloadVisualize
BU of 8dgj by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ib
Descriptor: Endoribonuclease Dcr-1, Loquacious, isoform B
Authors:Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
Deposit date:2022-06-23
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
3K8D
DownloadVisualize
BU of 3k8d by Molmil
Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase in complex with CTP and 2-deoxy-Kdo
Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, 3-deoxy-manno-octulosonate cytidylyltransferase, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Heyes, D.J, Levy, C.W, Lafite, P, Scrutton, N.S, Leys, D.
Deposit date:2009-10-14
Release date:2009-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based mechanism of CMP-2-keto-3-deoxymanno-octulonic acid synthetase: convergent evolution of a sugar-activating enzyme with DNA/RNA polymerases
J.Biol.Chem., 284, 2009
8DGI
DownloadVisualize
BU of 8dgi by Molmil
Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ia
Descriptor: Endoribonuclease Dcr-1, Loquacious, isoform B
Authors:Jouravleva, K, Golovenko, D, Demo, G, Dutcher, R.C, Tanaka Hall, T.M, Zamore, P.D, Korostelev, A.A.
Deposit date:2022-06-23
Release date:2022-11-16
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Structural basis of microRNA biogenesis by Dicer-1 and its partner protein Loqs-PB.
Mol.Cell, 82, 2022
6VLE
DownloadVisualize
BU of 6vle by Molmil
Crystal structure of human alpha 1,6-fucosyltransferase, FUT8 in its Apo-form
Descriptor: Alpha-(1,6)-fucosyltransferase, SULFATE ION
Authors:Jarva, M.A, Dramicanin, M, Lingford, J.P, Mao, R, John, A, Goddard-Borger, E.D.
Deposit date:2020-01-23
Release date:2020-02-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural basis of substrate recognition and catalysis by fucosyltransferase 8.
J.Biol.Chem., 295, 2020
8D64
DownloadVisualize
BU of 8d64 by Molmil
ELIC with cysteamine in POPC nanodisc
Descriptor: 2-AMINO-ETHANETHIOL, Erwinia ligand-gated ion channel
Authors:Petroff II, J.T, Deng, Z, Rau, M.J, Fitzpatrick, J.A.J, Yuan, P, Cheng, W.W.L.
Deposit date:2022-06-06
Release date:2022-11-23
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Open-channel structure of a pentameric ligand-gated ion channel reveals a mechanism of leaflet-specific phospholipid modulation.
Nat Commun, 13, 2022
3DV2
DownloadVisualize
BU of 3dv2 by Molmil
Crystal Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis
Descriptor: Nicotinate (Nicotinamide) nucleotide adenylyltransferase, SULFATE ION
Authors:Lu, S, Smith, C.D, Yang, Z, Pruett, P.S, Nagy, L, McCombs, D.P, DeLucas, L.J, Brouillette, W.J, Brouillette, C.G.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis.
ACTA CRYSTALLOGR.,SECT.F, 64, 2008

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon