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PDB: 99 results

1QZ4
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BU of 1qz4 by Molmil
Structure of YcfC Protein of Unknown Function Escherichia coli
Descriptor: Hypothetical protein ycfC, MERCURY (II) ION, PHOSPHATE ION
Authors:Otwinowski, Z, Midwest Center for Structural Genomics (MCSG)
Deposit date:2003-09-15
Release date:2004-03-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a hypothetical protein ycfC coded by Escherichia coli genome.
To be Published
1TRO
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BU of 1tro by Molmil
CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Descriptor: DNA (5'-D(*TP*GP*TP*AP*CP*TP*AP*GP*TP*TP*AP*AP*CP*TP*AP*GP*T P*AP*C)-3'), PROTEIN (TRP REPRESSOR), TRYPTOPHAN
Authors:Otwinowski, Z, Schevitz, R.W, Zhang, R.-G, Lawson, C.L, Joachimiak, A, Marmorstein, R, Luisi, B.F, Sigler, P.B.
Deposit date:1992-08-30
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of trp repressor/operator complex at atomic resolution.
Nature, 335, 1988
9EWK
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BU of 9ewk by Molmil
Solvent organization in ultrahigh-resolution protein crystal structure at room temperature
Descriptor: Crambin, ETHANOL
Authors:Chen, J.C.-H, Gilski, M, Chang, C, Borek, D, Rosenbaum, G, Lavens, A, Otwinowski, Z, Kubicki, M, Dauter, Z, Jaskolski, M, Joachimiak, A.
Deposit date:2024-04-04
Release date:2024-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.7 Å)
Cite:Solvent organization in the ultrahigh-resolution crystal structure of crambin at room temperature.
Iucrj, 11, 2024
1DW9
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BU of 1dw9 by Molmil
Structure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site
Descriptor: CHLORIDE ION, CYANATE LYASE, SULFATE ION
Authors:Walsh, M.A, Otwinowski, Z, Perrakis, A, Anderson, P.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:1999-12-03
Release date:2000-05-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of Cyanase Reveals that a Novel Dimeric and Decameric Arrangement of Subunits is Required for Formation of the Enzyme Active Site
Structure, 8, 2000
5DLL
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BU of 5dll by Molmil
Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: Aminopeptidase N, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Borek, D, Raczynska, J, Dubrovska, I, Grimshaw, S, Minasov, G, Shuvalova, L, Kwon, K, Anderson, W.F, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-09-07
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
5DO7
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BU of 5do7 by Molmil
Crystal Structure of the Human Sterol Transporter ABCG5/ABCG8
Descriptor: ATP-binding cassette sub-family G member 5, ATP-binding cassette sub-family G member 8
Authors:Lee, J.-Y, Kinch, L.N, Borek, D.M, Urbatsch, I.L, Xie, X.-S, Grishin, N.V, Cohen, J.C, Otwinowski, Z, Hobbs, H.H, Rosenbaum, D.M.
Deposit date:2015-09-10
Release date:2016-05-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.93 Å)
Cite:Crystal structure of the human sterol transporter ABCG5/ABCG8.
Nature, 533, 2016
6ROA
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BU of 6roa by Molmil
Crystal structure of V57G mutant of human cystatin C
Descriptor: Cystatin-C
Authors:Orlikowska, M, Behrendt, I, Borek, D, Otwinowski, Z, Skowron, P, Szymanska, A.
Deposit date:2019-05-10
Release date:2019-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution.
Febs J., 287, 2020
4YPI
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BU of 4ypi by Molmil
Structure of Ebola virus nucleoprotein N-terminal fragment bound to a peptide derived from Ebola VP35
Descriptor: Nucleoprotein, Polymerase cofactor VP35
Authors:Leung, D.W, Borek, D.M, Binning, J.M, Otwinowski, Z, Amarasinghe, G.K, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-03-13
Release date:2015-04-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:An Intrinsically Disordered Peptide from Ebola Virus VP35 Controls Viral RNA Synthesis by Modulating Nucleoprotein-RNA Interactions.
Cell Rep, 11, 2015
4X6Z
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BU of 4x6z by Molmil
Yeast 20S proteasome in complex with PR-VI modulator
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Rostankowski, R, Witkowska, J, Borek, D, Otwinowski, Z, Jankowska, E.
Deposit date:2014-12-09
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures revealed the common place of binding of low-molecular mass activators with the 20S proteasome
To Be Published
5IZM
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BU of 5izm by Molmil
The crystal structure of human eEFSec in complex with GDPNP
Descriptor: MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Selenocysteine-specific elongation factor
Authors:Dobosz-Bartoszek, M, Otwinowski, Z, Simonovic, M.
Deposit date:2016-03-25
Release date:2016-10-12
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation.
Nat Commun, 7, 2016
1POC
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BU of 1poc by Molmil
CRYSTAL STRUCTURE OF BEE-VENOM PHOSPHOLIPASE A2 IN A COMPLEX WITH A TRANSITION-STATE ANALOGUE
Descriptor: 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, CALCIUM ION, PHOSPHOLIPASE A2
Authors:Scott, D.L, Otwinowski, Z, Sigler, P.B.
Deposit date:1992-09-07
Release date:1993-10-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of bee-venom phospholipase A2 in a complex with a transition-state analogue.
Science, 250, 1990
1POA
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BU of 1poa by Molmil
INTERFACIAL CATALYSIS: THE MECHANISM OF PHOSPHOLIPASE A2
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Scott, D.L, Otwinowski, Z, Sigler, P.B.
Deposit date:1992-09-07
Release date:1993-10-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Interfacial catalysis: the mechanism of phospholipase A2.
Science, 250, 1990
1POB
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BU of 1pob by Molmil
CRYSTAL STRUCTURE OF COBRA-VENOM PHOSPHOLIPASE A2 IN A COMPLEX WITH A TRANSITION-STATE ANALOGUE
Descriptor: 1-O-OCTYL-2-HEPTYLPHOSPHONYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, CALCIUM ION, PHOSPHOLIPASE A2
Authors:White, S.P, Scott, D.L, Otwinowski, Z, Sigler, P.B.
Deposit date:1992-09-07
Release date:1993-10-31
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of cobra-venom phospholipase A2 in a complex with a transition-state analogue.
Science, 250, 1990
5T8V
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BU of 5t8v by Molmil
Chaetomium thermophilum cohesin loader SCC2, C-terminal fragment
Descriptor: CITRIC ACID, Putative uncharacterized protein
Authors:Tomchick, D.R, Yu, H, Kikuchi, S, Ouyang, Z, Borek, D, Otwinowski, Z.
Deposit date:2016-09-08
Release date:2016-10-19
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Crystal structure of the cohesin loader Scc2 and insight into cohesinopathy.
Proc.Natl.Acad.Sci.USA, 113, 2016
6VSC
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BU of 6vsc by Molmil
Single particle reconstruction of HemQ from Geobacillus based on data acquired in the presence of substantial aberrations
Descriptor: HemQ
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-11
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
6VRS
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BU of 6vrs by Molmil
Single particle reconstruction of glucose isomerase from Streptomyces rubiginosus based on data acquired in the presence of substantial aberrations
Descriptor: MANGANESE (II) ION, xylose isomerase
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-09
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
6VSA
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BU of 6vsa by Molmil
Single particle reconstruction of HemQ from Geobacillus based on data acquired in the presence of substantial aberrations
Descriptor: HemQ
Authors:Bromberg, R, Guo, Y, Borek, D, Otwinowski, Z.
Deposit date:2020-02-10
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:High-resolution cryo-EM reconstructions in the presence of substantial aberrations
Iucrj, 7, 2020
4OFK
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BU of 4ofk by Molmil
Crystal Structure of SYG-2 D4
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Ozkan, E, Borek, D, Otwinowski, Z, Garcia, K.C.
Deposit date:2014-01-15
Release date:2014-02-19
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Extracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Cell(Cambridge,Mass.), 156, 2014
4GHL
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BU of 4ghl by Molmil
Structural Basis for Marburg virus VP35 mediate immune evasion mechanisms
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Ramanan, P, Borek, D.M, Otwinowski, Z, Leung, D.W, Amarasinghe, G.K.
Deposit date:2012-08-07
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for Marburg virus VP35-mediated immune evasion mechanisms.
Proc.Natl.Acad.Sci.USA, 109, 2012
7U5T
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BU of 7u5t by Molmil
Structure of DHQS/EPSPS dimer from Candida albicans Aro1
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
7U5U
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BU of 7u5u by Molmil
Structure of the SK/DHQase/DHSD dimer from Candida albicans Aro1
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
7U5S
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BU of 7u5s by Molmil
CryoEM structure of the Candida albicans Aro1 dimer
Descriptor: Pentafunctional AROM polypeptide
Authors:Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-03-02
Release date:2022-05-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans.
Life Sci Alliance, 5, 2022
5VR0
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BU of 5vr0 by Molmil
Crystal structure of glucose isomerase from Streptomyces rubiginosus
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Borek, D, Otwinowski, Z.
Deposit date:2017-05-09
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Real-space analysis of radiation-induced specific changes with independent component analysis.
J Synchrotron Radiat, 25, 2018
3L26
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BU of 3l26 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA
Descriptor: CHLORIDE ION, MAGNESIUM ION, Polymerase cofactor VP35, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010
3L27
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BU of 3l27 by Molmil
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain R312A mutant
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Leung, D.W, Prins, K.C, Borek, D.M, Farahbakhsh, M, Tufariello, J.M, Ramanan, P, Nix, J.C, Helgeson, L.A, Otwinowski, Z, Honzatko, R.B, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.
Nat.Struct.Mol.Biol., 17, 2010

 

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