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PDB: 140 results

1K9P
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BU of 1k9p by Molmil
CRYSTAL STRUCTURE OF CALCIUM FREE (OR APO) HUMAN S100A6
Descriptor: BETA-MERCAPTOETHANOL, S100A6
Authors:Otterbein, L.R, Dominguez, R.
Deposit date:2001-10-29
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of S100A6 in the Ca(2+)-free and Ca(2+)-bound states: the calcium sensor mechanism of S100 proteins revealed at atomic resolution.
Structure, 10, 2002
1NWK
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BU of 1nwk by Molmil
CRYSTAL STRUCTURE OF MONOMERIC ACTIN IN THE ATP STATE
Descriptor: Actin, alpha skeletal muscle, CALCIUM ION, ...
Authors:Graceffa, P, Dominguez, R.
Deposit date:2003-02-06
Release date:2003-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of monomeric actin in the ATP state. Structural basis of nucleotide-dependent actin dynamics.
J.Biol.Chem., 278, 2003
4PKI
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Complex of ATP-actin With the C-terminal Actin-Binding Domain of Tropomodulin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rao, J.N, Dominguez, R.
Deposit date:2014-05-14
Release date:2014-07-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Actin cytoskeleton. Mechanism of actin filament pointed-end capping by tropomodulin.
Science, 345, 2014
4PKG
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BU of 4pkg by Molmil
Complex of ATP-actin With the N-terminal Actin-Binding Domain of Tropomodulin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rao, J.N, Dominguez, R.
Deposit date:2014-05-14
Release date:2014-07-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Actin cytoskeleton. Mechanism of actin filament pointed-end capping by tropomodulin.
Science, 345, 2014
4PKH
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BU of 4pkh by Molmil
Complex of ADP-actin With the N-terminal Actin-Binding Domain of Tropomodulin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rao, J.N, Dominguez, R.
Deposit date:2014-05-14
Release date:2014-07-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Actin cytoskeleton. Mechanism of actin filament pointed-end capping by tropomodulin.
Science, 345, 2014
3M3N
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BU of 3m3n by Molmil
Structure of a Longitudinal Actin Dimer Assembled by Tandem W Domains
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rebowski, G, Namgoong, S, Dominguez, R.
Deposit date:2010-03-09
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (7 Å)
Cite:Structure of a longitudinal actin dimer assembled by tandem w domains: implications for actin filament nucleation.
J.Mol.Biol., 403, 2010
3M1F
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BU of 3m1f by Molmil
Crosslinked complex of actin with first W domain of Vibrio parahaemolyticus VopL
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Namgoong, S, Dominguez, R.
Deposit date:2010-03-04
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of a longitudinal actin dimer assembled by tandem w domains: implications for actin filament nucleation.
J.Mol.Biol., 403, 2010
3CI5
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BU of 3ci5 by Molmil
Complex of Phosphorylated Dictyostelium Discoideum Actin with Gelsolin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, GLYCEROL, ...
Authors:Baek, K, Dominguez, R.
Deposit date:2008-03-10
Release date:2008-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Modulation of actin structure and function by phosphorylation of Tyr-53 and profilin binding.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4EDQ
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BU of 4edq by Molmil
MBP-fusion protein of myosin-binding protein c residues 149-269
Descriptor: Maltose-binding periplasmic protein,Myosin-binding protein C, cardiac-type chimeric protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Rebowski, G, Boczkowska, M, Dominguez, R.
Deposit date:2012-03-27
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:MBP-fusion protein of myosin-binding protein c residues 149-269
To be Published
8F8Q
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BU of 8f8q by Molmil
Cryo-EM structure of the CapZ-capped barbed end of F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Carman, P.J, Barrie, K.R, Dominguez, R.
Deposit date:2022-11-22
Release date:2023-06-07
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Structures of the free and capped ends of the actin filament.
Science, 380, 2023
8F8P
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BU of 8f8p by Molmil
Cryo-EM structure of F-actin in the ADP state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Carman, P.J, Barrie, K.R, Dominguez, R.
Deposit date:2022-11-22
Release date:2023-06-07
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (2.26 Å)
Cite:Structures of the free and capped ends of the actin filament.
Science, 380, 2023
8F8R
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BU of 8f8r by Molmil
Cryo-EM structure of the free barbed end of F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Carman, P.J, Barrie, K.R, Dominguez, R.
Deposit date:2022-11-22
Release date:2023-06-07
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of the free and capped ends of the actin filament.
Science, 380, 2023
8F8S
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BU of 8f8s by Molmil
Cryo-EM structure of the free pointed end of F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Carman, P.J, Barrie, K.R, Dominguez, R.
Deposit date:2022-11-22
Release date:2023-06-07
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structures of the free and capped ends of the actin filament.
Science, 380, 2023
8F8T
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BU of 8f8t by Molmil
Cryo-EM structure of the Tropomodulin-capped pointed end of F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Carman, P.J, Barrie, K.R, Dominguez, R.
Deposit date:2022-11-22
Release date:2023-06-07
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structures of the free and capped ends of the actin filament.
Science, 380, 2023
3CHW
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BU of 3chw by Molmil
Complex of Dictyostelium discoideum Actin with Profilin and the Last Poly-Pro of Human VASP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Major actin, ...
Authors:Baek, K, Dominguez, R.
Deposit date:2008-03-10
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modulation of actin structure and function by phosphorylation of Tyr-53 and profilin binding.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CIP
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BU of 3cip by Molmil
Complex of Dictyostelium Discoideum Actin with Gelsolin
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, GLYCEROL, ...
Authors:Baek, K, Dominguez, R.
Deposit date:2008-03-11
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Modulation of actin structure and function by phosphorylation of Tyr-53 and profilin binding.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3HIE
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BU of 3hie by Molmil
Structure of the membrane-binding domain of the Sec3 subunit of the Exocyst complex
Descriptor: Exocyst complex component SEC3, PHOSPHATE ION
Authors:Baek, K, Dominguez, R.
Deposit date:2009-05-19
Release date:2010-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function study of the N-terminal domain of exocyst subunit Sec3.
J.Biol.Chem., 285, 2010
3P53
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BU of 3p53 by Molmil
Structure of fascin
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, DODECAETHYLENE GLYCOL, Fascin, ...
Authors:Jansen, S, Dominguez, R.
Deposit date:2010-10-07
Release date:2011-06-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of actin filament bundling by fascin.
J.Biol.Chem., 286, 2011
5WFN
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BU of 5wfn by Molmil
Revised model of leiomodin 2-mediated actin regulation (alternate refinement of PDB 4RWT)
Descriptor: Actin-5C, Leiomodin-2, MAGNESIUM ION, ...
Authors:Yurtsever, Z, Eck, M.J, Dominguez, R.
Deposit date:2017-07-12
Release date:2017-08-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of leiomodin 2 in complex with actin: a structural and functional reexamination
Biophys.J., 113, 2017
5X1F
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BU of 5x1f by Molmil
CO bound cytochrome c oxidase without pump laser irradiation at 278K
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, A, Kubo, M, Baba, S, Yamashita, K, Hirata, K, Ueno, G, Nomura, T, Kimura, T, Shinzawa-Itoh, K, Baba, J, Hatano, K, Eto, Y, Miyamoto, A, Murakami, H, Kumasaka, T, Owada, S, Tono, K, Yabashi, M, Yamaguchi, Y, Yanagisawa, S, Sakaguchi, M, Ogura, T, Komiya, R, Yan, J, Yamashita, E, Yamamoto, M, Ago, H, Yoshikawa, S, Tsukihara, T.
Deposit date:2017-01-25
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase.
Sci Adv, 3, 2017
5X1B
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BU of 5x1b by Molmil
CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, A, Kubo, M, Baba, S, Yamashita, K, Hirata, K, Ueno, G, Nomura, T, Kimura, T, Shinzawa-Itoh, K, Baba, J, Hatano, K, Eto, Y, Miyamoto, A, Murakami, H, Kumasaka, T, Owada, S, Tono, K, Yabashi, M, Yamaguchi, Y, Yanagisawa, S, Sakaguchi, M, Ogura, T, Komiya, R, Yan, J, Yamashita, E, Yamamoto, M, Ago, H, Yoshikawa, S, Tsukihara, T.
Deposit date:2017-01-25
Release date:2017-08-09
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase.
Sci Adv, 3, 2017
5X19
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BU of 5x19 by Molmil
CO bound cytochrome c oxidase at 100 micro sec after pump laser irradiation to release CO from O2 reduction center
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Shimada, A, Kubo, M, Baba, S, Yamashita, K, Hirata, K, Ueno, G, Nomura, T, Kimura, T, Shinzawa-Itoh, K, Baba, J, Hatano, K, Eto, Y, Miyamoto, A, Murakami, H, Kumasaka, T, Owada, S, Tono, K, Yabashi, M, Yamaguchi, Y, Yanagisawa, S, Sakaguchi, M, Ogura, T, Komiya, R, Yan, J, Yamashita, E, Yamamoto, M, Ago, H, Yoshikawa, S, Tsukihara, T.
Deposit date:2017-01-25
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A nanosecond time-resolved XFEL analysis of structural changes associated with CO release from cytochrome c oxidase.
Sci Adv, 3, 2017
1S70
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BU of 1s70 by Molmil
Complex between protein ser/thr phosphatase-1 (delta) and the myosin phosphatase targeting subunit 1 (MYPT1)
Descriptor: 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), MANGANESE (II) ION, Serine/threonine protein phosphatase PP1-beta (or delta) catalytic subunit, ...
Authors:Kerff, F, Terrak, M, Dominguez, R.
Deposit date:2004-01-28
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of protein phosphatase 1 regulation
Nature, 429, 2004
3OK8
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BU of 3ok8 by Molmil
I-BAR OF PinkBAR
Descriptor: Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2, GLYCEROL
Authors:Boczkowska, M, Rebowski, G, Saarikangas, J, Lappalainen, P, Dominguez, R.
Deposit date:2010-08-24
Release date:2011-07-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Pinkbar is an epithelial-specific BAR domain protein that generates planar membrane structures.
Nat.Struct.Mol.Biol., 18, 2011
6BD2
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BU of 6bd2 by Molmil
Complex of 14-3-3 theta with an IRSp53 peptide doubly-phosphorylated at T340 and S366
Descriptor: 1,2-ETHANEDIOL, 14-3-3 protein theta, DI(HYDROXYETHYL)ETHER, ...
Authors:Kast, D.J, Dominguez, R.
Deposit date:2017-10-20
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of IRSp53 inhibition by 14-3-3.
Nat Commun, 10, 2019

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