Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 7397 results

2Q3G
DownloadVisualize
BU of 2q3g by Molmil
Structure of the PDZ domain of human PDLIM7 bound to a C-terminal extension from human beta-tropomyosin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PDZ and LIM domain protein 7
Authors:Gileadi, C, Papagrigoriou, E, Elkins, J, Burgess-Brown, N, Salah, E, Gileadi, O, Umeano, C, Bunkoczi, G, von Delft, F, Uppenberg, J, Pike, A.C.W, Arrowsmith, C.H, Edwards, A, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2007-05-30
Release date:2007-06-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms
Protein Sci., 19, 2010
2MG0
DownloadVisualize
BU of 2mg0 by Molmil
PAP262-270 in SDS micelles
Descriptor: Peptide from Prostatic acid phosphatase
Authors:Blokhin, D, Vklochkov, V, Filippov, A, Antzutkin, O.
Deposit date:2013-10-24
Release date:2014-10-29
Method:SOLUTION NMR
Cite:PAP262-270 in SDS micelles
To be Published
2PFS
DownloadVisualize
BU of 2pfs by Molmil
Crystal structure of universal stress protein from Nitrosomonas europaea
Descriptor: CHLORIDE ION, Universal stress protein
Authors:Chruszcz, M, Evdokimova, E, Cymborowski, M, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-04-05
Release date:2007-05-08
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
2PNT
DownloadVisualize
BU of 2pnt by Molmil
Crystal structure of the PDZ domain of human GRASP (GRP1) in complex with the C-terminal peptide of the metabotropic glutamate receptor type 1
Descriptor: CHLORIDE ION, General receptor for phosphoinositides 1-associated scaffold protein
Authors:Elkins, J, Papagrigoriou, E, Cooper, C, Gileadi, C, Uppenberg, J, Bray, J, von Delft, F, Pike, A.C.W, Ugochukwu, E, Umeano, C, Gileadi, O, Edwards, A, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2007-04-25
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms
Protein Sci., 19, 2010
6GDK
DownloadVisualize
BU of 6gdk by Molmil
Calcium bound form of human calmodulin mutant F141L
Descriptor: CALCIUM ION, Calmodulin-1
Authors:Grachov, O, Holt, C, Overgaard, M.T, Wimmer, R.
Deposit date:2018-04-23
Release date:2018-10-17
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Arrhythmia mutations in calmodulin cause conformational changes that affect interactions with the cardiac voltage-gated calcium channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3TWH
DownloadVisualize
BU of 3twh by Molmil
Selenium Derivatized RNA/DNA Hybrid in complex with RNase H Catalytic Domain D132N Mutant
Descriptor: DNA (5'-D(*AP*TP*(SDG)P*TP*CP*(SDG))-3'), MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Rob, A, Gerlits, O, Jiang, J.S, Gan, J.H, Huang, Z.
Deposit date:2011-09-21
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Novel complex MAD phasing and RNase H structural insights using selenium oligonucleotides.
Acta Crystallogr.,Sect.D, 70, 2014
3SOG
DownloadVisualize
BU of 3sog by Molmil
Crystal structure of the BAR domain of human Amphiphysin, isoform 1
Descriptor: 1,2-ETHANEDIOL, Amphiphysin, POTASSIUM ION
Authors:Allerston, C.K, Krojer, T, Chaikuad, A, Cooper, C.D.O, Berridge, G, Savitsky, P, Vollmar, M, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2011-06-30
Release date:2011-07-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:

3VDH
DownloadVisualize
BU of 3vdh by Molmil
Crystal structure of PbGH5A, a glycoside hydrolase family 5 enzyme from Prevotella bryantii B14
Descriptor: B-1,4-endoglucanase, CHLORIDE ION
Authors:Stogios, P.J, Evdokimova, E, Egorova, O, Yim, V, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-05
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B14.
J.Biol.Chem., 291, 2016
3ULU
DownloadVisualize
BU of 3ulu by Molmil
Structure of quaternary complex of human TLR3ecd with three Fabs (Form1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab1068 heavy chain, ...
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
3UV5
DownloadVisualize
BU of 3uv5 by Molmil
Crystal Structure of the tandem bromodomains of human Transcription initiation factor TFIID subunit 1 (TAF1)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Transcription initiation factor TFIID subunit 1
Authors:Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-11-29
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3UVY
DownloadVisualize
BU of 3uvy by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H4K16acK20ac)
Descriptor: Bromodomain-containing protein 4, Histone H4
Authors:Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-11-30
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3ULV
DownloadVisualize
BU of 3ulv by Molmil
Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab1068 heavy chain, ...
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.522 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
3UVD
DownloadVisualize
BU of 3uvd by Molmil
Crystal Structure of the bromodomain of human Transcription activator BRG1 (SMARCA4) in complex with N-Methyl-2-pyrrolidone
Descriptor: 1-methylpyrrolidin-2-one, Transcription activator BRG1
Authors:Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-11-29
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3UVW
DownloadVisualize
BU of 3uvw by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H4K5acK8ac)
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, Histone H4
Authors:Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-11-30
Release date:2012-01-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3UW9
DownloadVisualize
BU of 3uw9 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H4K8acK12ac)
Descriptor: Bromodomain-containing protein 4, histone 4 peptide (H4K8acK12ac)
Authors:Filippakopoulos, P, Felletar, I, Picaud, S, Keates, T, Muniz, J, Gileadi, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-12-01
Release date:2012-03-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3ULS
DownloadVisualize
BU of 3uls by Molmil
Crystal structure of Fab12
Descriptor: Fab12 heavy chain, Fab12 light chain
Authors:Luo, J, Gilliland, G.L, Obmolova, O, Malia, T, Teplyakov, A.
Deposit date:2011-11-11
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Lateral Clustering of TLR3:dsRNA Signaling Units Revealed by TLR3ecd:3Fabs Quaternary Structure.
J.Mol.Biol., 421, 2012
3TNJ
DownloadVisualize
BU of 3tnj by Molmil
Crystal structure of universal stress protein from Nitrosomonas europaea with AMP bound
Descriptor: ADENOSINE MONOPHOSPHATE, Universal stress protein (Usp)
Authors:Tkaczuk, K.L, Chruszcz, M, Shumilin, I.A, Evdokimova, E, Kagan, O, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-09-01
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insight into the universal stress protein family.
Evol Appl, 6, 2013
2FEM
DownloadVisualize
BU of 2fem by Molmil
Mutant R188M of the Cytidine Monophosphate Kinase From E. Coli
Descriptor: Cytidylate kinase
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
6Y5T
DownloadVisualize
BU of 6y5t by Molmil
Crystal structure of savinase at room temperature
Descriptor: CALCIUM ION, SODIUM ION, Subtilisin Savinase
Authors:Wu, S, Moroz, O, Turkenburg, J, Nielsen, J.E, Wilson, K.S, Teilum, K.
Deposit date:2020-02-25
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Conformational heterogeneity of Savinase from NMR, HDX-MS and X-ray diffraction analysis.
Peerj, 8, 2020
2I3Y
DownloadVisualize
BU of 2i3y by Molmil
Crystal structure of human glutathione peroxidase 5
Descriptor: 1,2-ETHANEDIOL, Epididymal secretory glutathione peroxidase
Authors:Kavanagh, K.L, Johansson, C, Rojkova, A, Umeano, C, Bunkoczi, G, Gileadi, O, von Delft, F, Weigelt, J, Arrowsmith, C, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-08-21
Release date:2006-09-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human glutathione peroxidase 5
To be published
2FEO
DownloadVisualize
BU of 2feo by Molmil
Mutant R188M of The Cytidine Monophosphate Kinase from E. coli complexed with dCMP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Cytidylate kinase, SULFATE ION
Authors:Ofiteru, A, Bucurenci, N, Alexov, E, Bertrand, T, Briozzo, P, Munier-Lehmann, H, Tourneux, L, Barzu, O, Gilles, A.M.
Deposit date:2005-12-16
Release date:2006-01-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase.
Febs J., 274, 2007
2F6P
DownloadVisualize
BU of 2f6p by Molmil
BenM effector binding domain- SeMet derivative
Descriptor: ACETATE ION, HTH-type transcriptional regulator benM, SODIUM ION, ...
Authors:Clark, T, Haddad, S, Ezezika, O, Neidle, E, Momany, C.
Deposit date:2005-11-29
Release date:2006-10-31
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Distinct Effector-binding Sites Enable Synergistic Transcriptional Activation by BenM, a LysR-type Regulator.
J.Mol.Biol., 367, 2007
2I1N
DownloadVisualize
BU of 2i1n by Molmil
Crystal structure of the 1st PDZ domain of Human DLG3
Descriptor: Discs, large homolog 3, SODIUM ION
Authors:Turnbull, A.P, Phillips, C, Bunkoczi, G, Debreczeni, J, Ugochukwu, E, Pike, A.C.W, Gorrec, F, Umeano, C, Elkins, J, Berridge, G, Savitsky, P, Gileadi, O, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C, Sundstrom, M, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-08-14
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of PICK1 and other PDZ domains obtained with the help of self-binding C-terminal extensions.
Protein Sci., 16, 2007
2I59
DownloadVisualize
BU of 2i59 by Molmil
Solution structure of RGS10
Descriptor: Regulator of G-protein signaling 10
Authors:Fedorov, O, Higman, V.A, Diehl, A, Leidert, M, Lemak, A, Schmieder, P, Oschkinat, H, Elkins, J, Soundarajan, M, Doyle, D.A, Arrowsmith, C, Sundstrom, M, Weigelt, J, Edwards, A, Ball, L.J, Structural Genomics Consortium (SGC)
Deposit date:2006-08-24
Release date:2006-10-31
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6ZVI
DownloadVisualize
BU of 6zvi by Molmil
Mbf1-ribosome complex
Descriptor: 18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ...
Authors:Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
Deposit date:2020-07-24
Release date:2020-09-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon