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PDB: 7397 件

5B2T
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BU of 5b2t by Molmil
Crystal structure of the Streptococcus pyogenes Cas9 VRER variant in complex with sgRNA and target DNA (TGCG PAM)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CRISPR-associated endonuclease Cas9, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2016-02-02
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for the Altered PAM Specificities of Engineered CRISPR-Cas9
Mol.Cell, 61, 2016
5B2S
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Crystal structure of the Streptococcus pyogenes Cas9 EQR variant in complex with sgRNA and target DNA (TGAG PAM)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CRISPR-associated endonuclease Cas9, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2016-02-02
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for the Altered PAM Specificities of Engineered CRISPR-Cas9
Mol.Cell, 61, 2016
4HPK
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Crystal structure of Clostridium histolyticum colg collagenase collagen-binding domain 3B at 1.35 Angstrom resolution in presence of calcium nitrate
分子名称: CALCIUM ION, CHLORIDE ION, Collagenase, ...
著者Philominathan, S.T.L, Wilson, J.J, Bauer, R, Matsushita, O, Sakon, J.
登録日2012-10-24
公開日2012-12-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural Comparison of ColH and ColG Collagen-Binding Domains from Clostridium histolyticum.
J.Bacteriol., 195, 2013
4LLR
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BU of 4llr by Molmil
Tryparedoxin peroxidase (TXNPX) from trypanosoma cruzi in the reduced state
分子名称: Tryparedoxin peroxidase
著者Pineyro, M.D, Pizarro, J.C, Lema, F, Pritsch, O, Cayota, A, Bentley, G.A, Robello, C.
登録日2013-07-09
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the TRYPAREDOXIN PEROXIDASE from the human parasite TRYPANOSOMA CRUZI
J.STRUCT.BIOL., 150, 2005
4GAI
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BU of 4gai by Molmil
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra
分子名称: EBI-005
著者Hou, J, Townson, S.A, Kovalchin, J.T, Masci, A, Kiner, O, Shu, Y, King, B, Thomas, C, Garcia, K.C, Furfine, E.S, Barnes, T.M.
登録日2012-07-25
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Design of a superior cytokine antagonist for topical ophthalmic use.
Proc.Natl.Acad.Sci.USA, 110, 2013
4ZXO
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BU of 4zxo by Molmil
The structure of a GH26 beta-mannanase from Bacteroides ovatus, BoMan26A.
分子名称: Glycosyl hydrolase family 26, PHOSPHATE ION, POTASSIUM ION
著者Bagenholm, V, Aurelius, O, Logan, D.T, Bouraoui, H, Stalbrand, H.
登録日2015-05-20
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A beta-MANNANASE.
J. Biol. Chem., 292, 2017
4GGR
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BU of 4ggr by Molmil
The structure of apo bradavidin2 (Form A)
分子名称: Bradavidin 2
著者Livnah, O, Meir, A.
登録日2012-08-07
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The highly dynamic oligomeric structure of bradavidin II is unique among avidin proteins.
Protein Sci., 22, 2013
4GML
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BU of 4gml by Molmil
Crystal structure of human NOT1 MIF4G domain
分子名称: CCR4-NOT transcription complex subunit 1
著者Petit, P, Weichenrieder, O, Wohlbold, L, Izaurralde, E.
登録日2012-08-16
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex
Nucleic Acids Res., 40, 2012
4ISC
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BU of 4isc by Molmil
Crystal structure of a putative Methyltransferase from Pseudomonas syringae
分子名称: BETA-MERCAPTOETHANOL, Methyltransferase
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Shuvalova, L, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2013-01-16
公開日2013-02-20
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of a putative Methyltransferase from Pseudomonas syringae
To be Published
4IU2
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Cohesin-dockerin -X domain complex from Ruminococcus flavefacience
分子名称: CALCIUM ION, CHLORIDE ION, Cell-wall anchoring protein, ...
著者Salama-Alber, O, Bayer, E, Frolow, F.
登録日2013-01-19
公開日2013-04-24
最終更新日2013-07-03
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Atypical Cohesin-Dockerin Complex Responsible for Cell Surface Attachment of Cellulosomal Components: BINDING FIDELITY, PROMISCUITY, AND STRUCTURAL BUTTRESSES.
J.Biol.Chem., 288, 2013
4ZWJ
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BU of 4zwj by Molmil
Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser
分子名称: Chimera protein of human Rhodopsin, mouse S-arrestin, and T4 Endolysin
著者Kang, Y, Zhou, X.E, Gao, X, He, Y, Liu, W, Ishchenko, A, Barty, A, White, T.A, Yefanov, O, Han, G.W, Xu, Q, de Waal, P.W, Ke, J, Tan, M.H.E, Zhang, C, Moeller, A, West, G.M, Pascal, B, Eps, N.V, Caro, L.N, Vishnivetskiy, S.A, Lee, R.J, Suino-Powell, K.M, Gu, X, Pal, K, Ma, J, Zhi, X, Boutet, S, Williams, G.J, Messerschmidt, M, Gati, C, Zatsepin, N.A, Wang, D, James, D, Basu, S, Roy-Chowdhury, S, Conrad, C, Coe, J, Liu, H, Lisova, S, Kupitz, C, Grotjohann, I, Fromme, R, Jiang, Y, Tan, M, Yang, H, Li, J, Wang, M, Zheng, Z, Li, D, Howe, N, Zhao, Y, Standfuss, J, Diederichs, K, Dong, Y, Potter, C.S, Carragher, B, Caffrey, M, Jiang, H, Chapman, H.N, Spence, J.C.H, Fromme, P, Weierstall, U, Ernst, O.P, Katritch, V, Gurevich, V.V, Griffin, P.R, Hubbell, W.L, Stevens, R.C, Cherezov, V, Melcher, K, Xu, H.E, GPCR Network (GPCR)
登録日2015-05-19
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.302 Å)
主引用文献Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser.
Nature, 523, 2015
5A9J
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BU of 5a9j by Molmil
Crystal structure of the Helicase domain of human DNA polymerase theta, apo-form
分子名称: DNA POLYMERASE THETA
著者Newman, J.A, Cooper, C.D.O, Aitkenhead, H, Pinkas, D.M, Kupinska, K, Burgess-Brown, N, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2015-07-21
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Structure of the Helicase Domain of DNA Polymerase Theta Reveals a Possible Role in the Microhomology-Mediated End-Joining Pathway.
Structure, 23, 2015
4GGT
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BU of 4ggt by Molmil
Structure of apo Bradavidin2 (Form B)
分子名称: Bradavidin 2
著者Livnah, O, Meir, A.
登録日2012-08-07
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.693 Å)
主引用文献The highly dynamic oligomeric structure of bradavidin II is unique among avidin proteins.
Protein Sci., 22, 2013
4IUB
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BU of 4iub by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 1
分子名称: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Frielingsdorf, S, Schmidt, A, Fritsch, J, Lenz, O, Scheerer, P.
登録日2013-01-20
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol., 10, 2014
2JZP
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BU of 2jzp by Molmil
NMR solution structure of Kx5Q ProtL mutant
分子名称: Protein L
著者Lopez-Mendez, N, Tadeo, X, Castano, D, Pons, M, Millet Aguilar-Galindo, O.
登録日2008-01-11
公開日2009-01-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Protein stabilization and the hofmeister effect: the role of hydrophobic solvation
Biophys.J., 97, 2009
4XW4
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BU of 4xw4 by Molmil
X-ray structure of PKAc with AMPPNP, SP20, calcium ions
分子名称: CALCIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
登録日2015-01-28
公開日2015-05-06
最終更新日2015-07-01
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
4H4A
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BU of 4h4a by Molmil
Crystal structure of the C-terminal domain of Drosophila melanogaster Zucchini
分子名称: Mitochondrial cardiolipin hydrolase
著者Voigt, F, Schulz, E.C, Barabas, O.
登録日2012-09-17
公開日2012-11-07
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the primary piRNA biogenesis factor Zucchini reveals similarity to the bacterial PLD endonuclease Nuc.
Rna, 18, 2012
4LV0
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BU of 4lv0 by Molmil
AmpC beta-lactamase in complex with m-aminophenyl boronic acid
分子名称: Beta-lactamase, M-AMINOPHENYLBORONIC ACID, PHOSPHATE ION
著者London, N, Eidam, O, Shoichet, B.K.
登録日2013-07-25
公開日2014-07-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
4H7U
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Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, ...
著者Tan, T.C, Spadiut, O, Divne, C.
登録日2012-09-20
公開日2013-08-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The 1.6 A crystal structure of pyranose dehydrogenase from Agaricus meleagris rationalizes substrate specificity and reveals a flavin intermediate.
Plos One, 8, 2013
4M3F
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Rapid and efficient design of new inhibitors of Mycobacterium tuberculosis transcriptional repressor EthR using fragment growing, merging and linking approaches
分子名称: HTH-type transcriptional regulator EthR, N-(3-methylbutyl)-4-(2-methyl-1,3-thiazol-4-yl)benzenesulfonamide
著者Villemagne, B, Flipo, M, Blondiaux, N, Crauste, C, Malaquin, S, Leroux, F, Piveteau, C, Villeret, V, Brodin, P, Villoutreix, B, Sperandio, O, Wohlkonig, A, Wintjens, R, Deprez, B, Baulard, A, Willand, N.
登録日2013-08-06
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ligand Efficiency Driven Design of New Inhibitors of Mycobacterium tuberculosis Transcriptional Repressor EthR Using Fragment Growing, Merging, and Linking Approaches.
J.Med.Chem., 57, 2014
4HJF
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EAL domain of phosphodiesterase PdeA in complex with c-di-GMP and Ca++
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, GGDEF family protein
著者Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Massa, C, Schirmer, T, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2012-10-12
公開日2012-10-31
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of EAL domain from Caulobacter crescentus in complex with c-di-GMP and Ca
TO BE PUBLISHED
5AOD
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BU of 5aod by Molmil
Crystal structure of wild type pneumolysin.
分子名称: PNEUMOLYSIN
著者van Pee, K, Yildiz, O.
登録日2015-09-10
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Wild Type Pneumolysin
To be Published
5AR1
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BU of 5ar1 by Molmil
Crystal structure of Cdc11 from Saccharomyces cerevisiae
分子名称: CELL DIVISION CONTROL PROTEIN 11
著者Brausemann, A, Gerhardt, S, Schott, A.K, Einsle, O, Grosse-Berkenbusch, A, Johnsson, N, Gronemeyer, T.
登録日2015-09-23
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal Structure of Cdc11, a Septin Subunit from Saccharomyces Cerevisiae.
J.Struct.Biol., 193, 2016
5AYN
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BU of 5ayn by Molmil
Crystal structure of a bacterial homologue of iron transporter ferroportin in outward-facing state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, Solute carrier family 39 (Iron-regulated transporter)
著者Taniguchi, R, Kato, H.E, Font, J, Deshpande, C.N, Ishitani, R, Jormakka, M, Nureki, O.
登録日2015-08-25
公開日2015-11-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Outward- and inward-facing structures of a putative bacterial transition-metal transporter with homology to ferroportin
Nat Commun, 6, 2015
5B2R
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BU of 5b2r by Molmil
Crystal structure of the Streptococcus pyogenes Cas9 VQR variant in complex with sgRNA and target DNA (TGA PAM)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CRISPR-associated endonuclease Cas9, ...
著者Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2016-02-02
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Altered PAM Specificities of Engineered CRISPR-Cas9
Mol.Cell, 61, 2016

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件を2024-08-07に公開中

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