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PDB: 7397 results

1SL4
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Crystal Structure of DC-SIGN carbohydrate recognition domain complexed with Man4
Descriptor: CALCIUM ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, mDC-SIGN1B type I isoform
Authors:Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1SM7
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Solution structure of the recombinant pronapin precursor, BnIb.
Descriptor: recombinant Ib pronapin
Authors:Pantoja-Uceda, D, Palomares, O, Bruix, M, Villalba, M, Rodriguez, R, Rico, M, Santoro, J.
Deposit date:2004-03-08
Release date:2005-02-01
Last modified:2013-05-01
Method:SOLUTION NMR
Cite:Solution structure and stability against digestion of rproBnIb, a recombinant 2S albumin from rapeseed: relationship to its allergenic properties.
Biochemistry, 43, 2004
7PV0
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Crystal structure of a Mic60-Mic19 fusion protein
Descriptor: MICOS complex subunit MIC60,MICOS complex subunit MIC60-MIC19,Mic60-Mic19, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)
Authors:Funck, K, Bock-Bierbaum, T, Daumke, O.
Deposit date:2021-10-01
Release date:2022-09-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural insights into crista junction formation by the Mic60-Mic19 complex.
Sci Adv, 8, 2022
4R81
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BU of 4r81 by Molmil
NAD(P)H:quinone oxidoreductase from Methanothermobacter marburgensis
Descriptor: FLAVIN MONONUCLEOTIDE, NADH dehydrogenase
Authors:Ullmann, E, Tan, T.C, Herwig, C, Divne, C, Spadiut, O.
Deposit date:2014-08-29
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A novel cytosolic NADH:quinone oxidoreductase from Methanothermobacter marburgensis.
Biosci.Rep., 34, 2014
1S2V
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BU of 1s2v by Molmil
Crystal structure of phosphoenolpyruvate mutase complexed with Mg(II)
Descriptor: MAGNESIUM ION, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
7PSP
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Crystal structure of S100A4 labeled with NU000846b.
Descriptor: (2R,4R)-1-(2-chloranylethanoyl)-N-(3-chlorophenyl)-4-phenyl-pyrrolidine-2-carboxamide, CALCIUM ION, Protein S100-A4
Authors:Giroud, C, Szommer, T, Coxon, C, Monteiro, O, Christott, T, Bennett, J, Aitmakhanova, K, Raux, B, Newman, J, Elkins, J, Arruda Bezerra, G, Krojer, T, Koekemoer, L, Von Delft, F, Bountr, C, Brennan, P, Fedorov, O.
Deposit date:2021-09-23
Release date:2022-10-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of S100A4 labeled with NU000846b.
To Be Published
4R1Y
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BU of 4r1y by Molmil
Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitor
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3-(diethylamino)propyl (3-{[5-(3,4-dimethoxyphenyl)-2-oxo-2H-1,3,4-thiadiazin-3(6H)-yl]methyl}phenyl)carbamate, Hepatocyte growth factor receptor
Authors:Blaukat, A, Bladt, F, Friese-Hamim, M, Knuehl, C, Fittschen, C, Graedler, U, Meyring, M, Dorsch, D, Stieber, F, Schadt, O.
Deposit date:2014-08-08
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
1SEH
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BU of 1seh by Molmil
Crystal structure of E. coli dUTPase complexed with the product dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase
Authors:Barabas, O, Kovari, J, Pongracz, V, Wilmanns, M, Vertessy, B.G.
Deposit date:2004-02-17
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural Insights into the Catalytic Mechanism of Phosphate Ester Hydrolysis by dUTPase
J.Biol.Chem., 279, 2004
1SC8
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BU of 1sc8 by Molmil
Urokinase Plasminogen Activator B-Chain-J435 Complex
Descriptor: N-(BENZYLSULFONYL)SERYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}GLYCINAMIDE, SULFATE ION, plasminogen activator, ...
Authors:Schweinitz, A, Steinmetzer, T, Banke, I.J, Arlt, M.J.E, Stuerzebecher, A, Schuster, O, Geissler, A, Giersiefen, H, Zeslawska, E, Jacob, U, Kruger, A, Stuerzebecher, J.
Deposit date:2004-02-12
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Design of novel and selective inhibitors of urokinase-type plasminogen activator with improved pharmacokinetic properties for use as antimetastatic agents
J.Biol.Chem., 279, 2004
4RA7
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Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin
Descriptor: (2R,4S)-2-[(1R)-2-hydroxy-1-{[(2-hydroxynaphthalen-1-yl)carbonyl]amino}ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-09
Release date:2014-09-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with nafcillin
To be Published
4RFA
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BU of 4rfa by Molmil
Crystal structure of cyclic nucleotide-binding domain containing protein from Listeria monocytogenes EGD-e
Descriptor: Lmo0740 protein
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Jedrzejczak, R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-09-25
Release date:2014-10-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of cyclic nucleotide-binding domain containing protein from Listeria monocytogenes EGD-e
To be Published
4QXU
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BU of 4qxu by Molmil
Novel Inhibition Mechanism of Membrane Metalloprotease by an Exosite-Swiveling Conformational antibody
Descriptor: Matrix metalloproteinase-14, SULFATE ION, anti_MT1-MMP Heavy chain, ...
Authors:Udi, Y, Grossman, M, Solomonov, I, Dym, O, Rozenberg, H, Moreno, v, Cuiniasse, P, Dive, V, Arroyo, A.G, Sagi, I, Israel Structural Proteomics Center (ISPC)
Deposit date:2014-07-22
Release date:2014-12-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition mechanism of membrane metalloprotease by an exosite-swiveling conformational antibody.
Structure, 23, 2015
7Q3I
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Human Transthyretin expressed in Vibrio natriegens
Descriptor: Transthyretin
Authors:Hild Walett, O, Hammarstrom, P.
Deposit date:2021-10-27
Release date:2022-11-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Human Transthyretin expressed in Vibrio natriegens
To Be Published
1SL6
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BU of 1sl6 by Molmil
Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
Descriptor: C-type lectin DC-SIGNR, CALCIUM ION, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Guo, Y, Feinberg, H, Conroy, E, Mitchell, D.A, Alvarez, R, Blixt, O, Taylor, M.E, Weis, W.I, Drickamer, K.
Deposit date:2004-03-05
Release date:2004-06-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR
Nat.Struct.Mol.Biol., 11, 2004
1SCF
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BU of 1scf by Molmil
HUMAN RECOMBINANT STEM CELL FACTOR
Descriptor: CALCIUM ION, PENTAETHYLENE GLYCOL, STEM CELL FACTOR
Authors:Jiang, X, Gurel, O, Langley, K.E, Hendrickson, W.A.
Deposit date:1998-06-04
Release date:2000-07-07
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the active core of human stem cell factor and analysis of binding to its receptor kit.
EMBO J., 19, 2000
7QCQ
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BU of 7qcq by Molmil
VHH Z70 in interaction with PHF6 Tau peptide
Descriptor: GLYCEROL, Tau 301-312, VHH Z70
Authors:Danis, C, Dupre, E, Zejneli, O, Caillierez, R, Arrial, A, Begard, S, Loyens, A, Mortelecque, J, Cantrelle, F.-X, Hanoulle, X, Rain, J.-C, Colin, M, Buee, L, Landrieu, I.
Deposit date:2021-11-25
Release date:2021-12-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of Tau seeding by targeting Tau nucleation core within neurons with a single domain antibody fragment.
Mol.Ther., 30, 2022
1SLT
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BU of 1slt by Molmil
STRUCTURE OF S-LECTIN, A DEVELOPMENTALLY REGULATED VERTEBRATE BETA-GALACTOSIDE BINDING PROTEIN
Descriptor: BOVINE GALECTIN-1, CHLORIDE ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Liao, D.-I, Herzberg, O.
Deposit date:1993-10-20
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of S-lectin, a developmentally regulated vertebrate beta-galactoside-binding protein.
Proc.Natl.Acad.Sci.USA, 91, 1994
1SQE
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BU of 1sqe by Molmil
1.5A Crystal Structure Of the protein PG130 from Staphylococcus aureus, Structural genomics
Descriptor: hypothetical protein PG130
Authors:Zhang, R, Wu, R, Joachimiak, G, Schneewind, O, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-03-18
Release date:2004-08-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Staphylococcus aureus IsdG and IsdI, heme-degrading enzymes with structural similarity to monooxygenases
J.Biol.Chem., 280, 2005
7QBU
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B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CO-METHYLCOBALAMIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
7QBT
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BU of 7qbt by Molmil
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CO-METHYLCOBALAMIN, FE (III) ION, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
7QBS
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B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, S-adenosyl-L-methionine, and peptide bound.
Descriptor: CO-METHYLCOBALAMIN, FE (III) ION, IRON/SULFUR CLUSTER, ...
Authors:Bernardo-Garcia, N, Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.327 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
7QBV
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B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-adenosyl-L-homocysteine bound.
Descriptor: CO-METHYLCOBALAMIN, FE (III) ION, IRON/SULFUR CLUSTER, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
1SUV
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BU of 1suv by Molmil
Structure of Human Transferrin Receptor-Transferrin Complex
Descriptor: CARBONATE ION, FE (III) ION, Serotransferrin, ...
Authors:Cheng, Y, Zak, O, Aisen, P, Harrison, S.C, Walz, T.
Deposit date:2004-03-26
Release date:2004-04-13
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure of the Human Transferrin Receptor-Transferrin Complex
Cell(Cambridge,Mass.), 116, 2004
4RFV
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BU of 4rfv by Molmil
Structure of the Mycobacterium tuberculosis APS kinase CysC Cys556Ala mutant
Descriptor: Bifunctional enzyme CysN/CysC, PHOSPHATE ION
Authors:Poyraz, O, Brunner, K, Schnell, R, Schneider, G.
Deposit date:2014-09-28
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal Structures of the Kinase Domain of the Sulfate-Activating Complex in Mycobacterium tuberculosis.
Plos One, 10, 2015
7QH4
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Structure of the B. subtilis disome - collided 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R.
Deposit date:2021-12-10
Release date:2022-03-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (5.45 Å)
Cite:Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.
Nature, 603, 2022

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