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PDB: 66 results

8BVR
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BU of 8bvr by Molmil
Cryo-EM structure of rat SLC22A6 in the apo state
Descriptor: PHOSPHATE ION, Solute carrier family 22 member 6, Synthetic nanobody (Sybody)
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-05
Release date:2023-07-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8BW7
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BU of 8bw7 by Molmil
Cryo-EM structure of rat SLC22A6 bound to alpha-ketoglutaric acid
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, Solute carrier family 22 member 6, ...
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-06
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
8BVT
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BU of 8bvt by Molmil
Cryo-EM structure of rat SLC22A6 bound to probenecid
Descriptor: 4-(dipropylsulfamoyl)benzoic acid, Solute carrier family 22 member 6, Synthetic nanobody (Sybody)
Authors:Parker, J.L, Kato, T, Newstead, S.
Deposit date:2022-12-06
Release date:2023-07-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.94 Å)
Cite:Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1.
Nat.Struct.Mol.Biol., 30, 2023
9BIT
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BU of 9bit by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 1
Descriptor: CLOXACILLIN, Solute carrier family 15 member 2, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2024-04-24
Release date:2024-07-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for antibiotic transport and inhibition in PepT2.
Nat Commun, 15, 2024
9BIU
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BU of 9biu by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 2
Descriptor: CLOXACILLIN, Solute carrier family 15 member 2, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2024-04-24
Release date:2024-07-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for antibiotic transport and inhibition in PepT2.
Nat Commun, 15, 2024
9BIS
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BU of 9bis by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to amoxicillin
Descriptor: 2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID, Solute carrier family 15 member 2, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2024-04-24
Release date:2024-07-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for antibiotic transport and inhibition in PepT2.
Nat Commun, 15, 2024
9BIR
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BU of 9bir by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cefadroxil
Descriptor: Cefadroxil, Solute carrier family 15 member 2, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2024-04-24
Release date:2024-07-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for antibiotic transport and inhibition in PepT2.
Nat Commun, 15, 2024
8APY
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BU of 8apy by Molmil
Crystal structure of the H12A variant of the KDEL receptor bound to sybody
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, Synthetic nanobody
Authors:Parker, J.L, Smith, K, Newstead, S.
Deposit date:2022-08-10
Release date:2023-08-23
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Molecular basis for pH sensing in the KDEL trafficking receptor.
Structure, 32, 2024
7NVH
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BU of 7nvh by Molmil
Cryo-EM structure of the mycolic acid transporter MmpL3 from M. tuberculosis
Descriptor: Lauryl Maltose Neopentyl Glycol, Trehalose monomycolate exporter MmpL3
Authors:Adams, O, Deme, J.C, Parker, J.L, Lea, S.M, Newstead, S.
Deposit date:2021-03-15
Release date:2021-06-16
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure and resistance landscape of M. tuberculosis MmpL3: An emergent therapeutic target.
Structure, 29, 2021
7NQK
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BU of 7nqk by Molmil
Cryo-EM structure of the mammalian peptide transporter PepT2
Descriptor: Solute carrier family 15 member 2, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2021-03-01
Release date:2021-07-07
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of PepT2 reveals structural basis for proton-coupled peptide and prodrug transport in mammals.
Sci Adv, 7, 2021
7ZK1
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BU of 7zk1 by Molmil
Crystal structure of cystinosin from Arabidopsis thaliana bound to sybody and nanobody
Descriptor: Cystinosin homolog, Llama derived nanobody, Synthetic nanobody (Sybody)
Authors:Loebel, M, Newstead, S, Omari, K.E.
Deposit date:2022-04-12
Release date:2022-08-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis for proton coupled cystine transport by cystinosin.
Nat Commun, 13, 2022
7ZKZ
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BU of 7zkz by Molmil
Crystal structure of cystinosin from Arabidopsis thaliana bound to two nanobodies
Descriptor: Cystinosin homolog, Llama nanobody, nanobody
Authors:Loebel, M, Newstead, S.
Deposit date:2022-04-13
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.329 Å)
Cite:Structural basis for proton coupled cystine transport by cystinosin.
Nat Commun, 13, 2022
7ZKW
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BU of 7zkw by Molmil
Crystal structure of cystinosin from Arabidopsis thaliana in complex with Cystine and sybody
Descriptor: Cystinosin homolog, L-cystine, sybody
Authors:Parker, J.L, Loebel, M, Newstead, S.
Deposit date:2022-04-13
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.372 Å)
Cite:Structural basis for proton coupled cystine transport by cystinosin.
Nat Commun, 13, 2022
6F34
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BU of 6f34 by Molmil
Crystal structure of a bacterial cationic amino acid transporter (CAT) homologue bound to Arginine.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ARGININE, Amino acid transporter, ...
Authors:Jungnickel, K.E.J, Newstead, S.
Deposit date:2017-11-27
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.13 Å)
Cite:Structural basis for amino acid transport by the CAT family of SLC7 transporters.
Nat Commun, 9, 2018
5L7I
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BU of 5l7i by Molmil
Structure of human Smoothened in complex with Vismodegib
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, SODIUM ION, ...
Authors:Byrne, E.X.B, Sircar, R, Miller, P.S, Hedger, G, Luchetti, G, Nachtergaele, S, Tully, M.D, Mydock-McGrane, L, Covey, D.F, Rambo, R.F, Sansom, M.S.P, Newstead, S, Rohatgi, R, Siebold, C.
Deposit date:2016-06-03
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of Smoothened regulation by its extracellular domains.
Nature, 535, 2016
5L7D
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BU of 5l7d by Molmil
Structure of human Smoothened in complex with cholesterol
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, SODIUM ION, ...
Authors:Byrne, E.F.X, Sircar, R, Miller, P.S, Hedger, G, Luchetti, G, Nachtergaele, S, Tully, M.D, Mydock-McGrane, L, Covey, D.F, Rambo, R.P, Sansom, M.S.P, Newstead, S, Rohatgi, R, Siebold, C.
Deposit date:2016-06-03
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of Smoothened regulation by its extracellular domains.
Nature, 535, 2016
7BC6
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BU of 7bc6 by Molmil
Cryo-EM structure of the outward open proton coupled folate transporter at pH 7.5
Descriptor: Proton-coupled folate transporter, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2020-12-18
Release date:2021-05-12
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of antifolate recognition and transport by PCFT.
Nature, 595, 2021
7BC7
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BU of 7bc7 by Molmil
Cryo-EM structure of the proton coupled folate transporter at pH 6.0 bound to pemetrexed
Descriptor: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, Proton-coupled folate transporter, nanobody
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2020-12-18
Release date:2021-05-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of antifolate recognition and transport by PCFT.
Nature, 595, 2021
7P9V
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BU of 7p9v by Molmil
Cryo EM structure of System XC-
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, Cystine/glutamate transporter
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2021-07-28
Release date:2021-11-17
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis for redox control by the human cystine/glutamate antiporter system xc .
Nat Commun, 12, 2021
7P9U
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BU of 7p9u by Molmil
Cryo EM structure of System XC- in complex with glutamate
Descriptor: 4F2 cell-surface antigen heavy chain, Cystine/glutamate transporter, GLUTAMIC ACID
Authors:Parker, J.L, Deme, J.C, Lea, S.M, Newstead, S.
Deposit date:2021-07-28
Release date:2021-11-17
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular basis for redox control by the human cystine/glutamate antiporter system xc .
Nat Commun, 12, 2021
6I6B
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BU of 6i6b by Molmil
Crystal structure of the KDEL receptor in the peptide free state.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2
Authors:Braeuer, P, Newstead, S.
Deposit date:2018-11-15
Release date:2019-02-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor.
Science, 363, 2019
6I6J
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BU of 6i6j by Molmil
Crystal structure of the KDEL receptor bound to synthetic nanobody.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, Sybody
Authors:Braeuer, P, Newstead, S.
Deposit date:2018-11-15
Release date:2019-02-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor.
Science, 363, 2019
5NKQ
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BU of 5nkq by Molmil
Crystal structure of a dual topology fluoride ion channel.
Descriptor: FLUORIDE ION, Monobody, Putative fluoride ion transporter CrcB, ...
Authors:Stockbridge, R, Miller, C, Newstead, S.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structures of a double-barrelled fluoride ion channel.
Nature, 525, 2015
6I6H
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BU of 6i6h by Molmil
Crystal structure of the KDEL receptor in the peptide bound state
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, AEKDEL peptide, ER lumen protein-retaining receptor 2
Authors:Braeuer, P, Newstead, S.
Deposit date:2018-11-15
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for pH-dependent retrieval of ER proteins from the Golgi by the KDEL receptor.
Science, 363, 2019
6H7U
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BU of 6h7u by Molmil
Crystal structure of a POT family transporter in complex with 5-aminolevulinic acid
Descriptor: 5-azanyl-4-oxidanylidene-pentanoic acid, Peptide ABC transporter permease
Authors:Minhas, G.S, Newstead, S.
Deposit date:2018-07-31
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for prodrug recognition by the SLC15 family of proton-coupled peptide transporters.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019

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PDB entries from 2024-10-30

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