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PDB: 218 results

6TWZ
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BU of 6twz by Molmil
14-3-3 sigma complexed with a phosphorylated 16E6 peptide
Descriptor: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D(-)-TARTARIC ACID, ...
Authors:Gogl, G, Cousido-Siah, A, Sluchanko, N.N, Trave, G.
Deposit date:2020-01-13
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Dual Specificity PDZ- and 14-3-3-Binding Motifs: A Structural and Interactomics Study.
Structure, 28, 2020
3UK7
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BU of 3uk7 by Molmil
Crystal Structure of Arabidopsis thaliana DJ-1D
Descriptor: Class I glutamine amidotransferase-like domain-containing protein
Authors:Seo, K.H, Zhuang, N.N, Son, D.Y, Lee, K.H.
Deposit date:2011-11-09
Release date:2011-11-23
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Arabidopsis DJ-1D
To be Published
2QC7
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BU of 2qc7 by Molmil
Crystal structure of the protein-disulfide isomerase related chaperone ERp29
Descriptor: Endoplasmic reticulum protein ERp29
Authors:Barak, N.N, Sevvana, M, Neumann, P, Malesevic, M, Naumann, K, Fischer, G, Sheldrick, G.M, Stubbs, M.T, Ferrari, D.M.
Deposit date:2007-06-19
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and functional analysis of the protein disulfide isomerase-related protein ERp29.
J.Mol.Biol., 385, 2009
3L31
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BU of 3l31 by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with the inhibitor, AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-16
Release date:2010-04-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
6K5U
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BU of 6k5u by Molmil
Crystal structure of the myb domain of S. pombe Tbf1
Descriptor: Telomeric DNA-binding factor trf1
Authors:Zhou, Y.Z, Wang, N.N, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-05-31
Release date:2020-06-03
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:Crystal structure of the myb domain of S. pombe Tbf1
To Be Published
3D7P
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BU of 3d7p by Molmil
Crystal structure of human Transthyretin (TTR) at pH 4.0
Descriptor: Transthyretin
Authors:Palaninathan, S.K, Mohamedmohaideen, N.N, Snee, W.C, Kelly, J.W, Sacchettini, J.C.
Deposit date:2008-05-21
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural insight into pH-induced conformational changes within the native human transthyretin tetramer.
J.Mol.Biol., 382, 2008
2LPU
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BU of 2lpu by Molmil
Solution structures of KmAtg10
Descriptor: KmAtg10
Authors:Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
Deposit date:2012-02-19
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
7YO8
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BU of 7yo8 by Molmil
Crystal structure of fission yeast Hfl1 LIR fused to human GABARAPL2
Descriptor: Transmembrane protein 184 homolog C30D11.06c,Gamma-aminobutyric acid receptor-associated protein-like 2
Authors:Yamasaki, A, Noda, N.N.
Deposit date:2022-08-01
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Development of new tools to study membrane-anchored mammalian Atg8 proteins.
Autophagy, 19, 2023
7D0I
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BU of 7d0i by Molmil
Cryo-EM structure of Schizosaccharomyces pombe Atg9
Descriptor: Autophagy-related protein 9, Lauryl Maltose Neopentyl Glycol
Authors:Matoba, K, Tsutsumi, A, Kikkawa, M, Noda, N.N.
Deposit date:2020-09-10
Release date:2020-10-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion.
Nat.Struct.Mol.Biol., 27, 2020
7OAR
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BU of 7oar by Molmil
Crystal structure of helicase Pif1 from Thermus oshimai in complex with parallel G-quadruplex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (28-MER), MAGNESIUM ION, ...
Authors:Dai, Y.X, Liu, N.N, Guo, H.L, Chen, W.F, Rety, S, Xi, X.G.
Deposit date:2021-04-20
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural mechanism underpinning Thermus oshimai Pif1-mediated G-quadruplex unfolding.
Embo Rep., 23, 2022
1E52
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BU of 1e52 by Molmil
Solution structure of Escherichia coli UvrB C-terminal domain
Descriptor: EXCINUCLEASE ABC SUBUNIT
Authors:Alexandrovich, A.A, Kelly, G.G, Frenkiel, T.A, Moolenaar, G.F, Goosen, N.N, Sanderson, M.R, Lane, A.N.
Deposit date:2000-07-14
Release date:2001-07-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure, Hydrodynamics and Thermodynamics of the Uvrb C-Terminal Domain.
J.Biomol.Struct.Dyn., 19, 2001
1HQ5
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BU of 1hq5 by Molmil
CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH S-(2-BORONOETHYL)-L-CYSTEINE, AN L-ARGININE ANALOGUE
Descriptor: ARGINASE 1, MANGANESE (II) ION, S-2-(BORONOETHYL)-L-CYSTEINE
Authors:Kim, N.N, Cox, J.D, Baggio, R.F, Emig, F.A, Mistry, S.K, Harper, S.L, Speicher, D.W, Morris Jr, S.M, Ash, D.E, Traish, A, Christianson, D.W.
Deposit date:2000-12-14
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Probing erectile function: S-(2-boronoethyl)-L-cysteine binds to arginase as a transition state analogue and enhances smooth muscle relaxation in human penile corpus cavernosum.
Biochemistry, 40, 2001
8C18
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BU of 8c18 by Molmil
Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
Descriptor: ASTAXANTHIN, Astaxanthin binding fasciclin family protein
Authors:Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S.
Deposit date:2022-12-20
Release date:2023-04-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP.
Commun Biol, 6, 2023
4KML
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BU of 4kml by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody
Descriptor: Major prion protein, Nanobody
Authors:Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
Deposit date:2013-05-08
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014
113D
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BU of 113d by Molmil
THE STRUCTURE OF GUANOSINE-THYMIDINE MISMATCHES IN B-DNA AT 2.5 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*TP*GP*CP*G)-3')
Authors:Hunter, W.N, Brown, T, Kneale, G, Anand, N.N, Rabinovich, D, Kennard, O.
Deposit date:1993-01-04
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of guanosine-thymidine mismatches in B-DNA at 2.5-A resolution.
J.Biol.Chem., 262, 1987
4DMM
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BU of 4dmm by Molmil
3-oxoacyl-[acyl-carrier-protein] reductase from Synechococcus elongatus PCC 7942 in complex with NADP
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Chen, C, Zhuang, N.N, Lee, K.H.
Deposit date:2012-02-08
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:3-oxoacyl-[acyl-carrier-protein] reductase from Synechococcus elongatus PCC 7942 in complex with NADP
to be published
7EU4
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BU of 7eu4 by Molmil
Crystal structure of plant ATG12 complexed with the AIM12 of ATG3
Descriptor: AIM12 from Autophagy-related protein 3, Ubiquitin-like protein ATG12B
Authors:Matoba, K, Noda, N.N.
Deposit date:2021-05-16
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Atg12-Interacting Motif Is Crucial for E2-E3 Interaction in Plant Atg8 System.
Biol.Pharm.Bull., 44, 2021
3MMP
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BU of 3mmp by Molmil
Structure of the Qb replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Elongation factor Tu 2, Elongation factor Ts, ...
Authors:Kidmose, R.T, Vasiliev, N.N, Chetverin, A.B, Knudsen, C.R, Andersen, G.R.
Deposit date:2010-04-20
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Qbeta replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins.
Proc.Natl.Acad.Sci.USA, 107, 2010
7F2X
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BU of 7f2x by Molmil
Crystal structure of MEK1 C121S mutant
Descriptor: MEK1 F11, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Fujioka, Y, Noda, N.N.
Deposit date:2021-06-15
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Qualitative differences in disease-associated MEK mutants reveal molecular signatures and aberrant signaling-crosstalk in cancer.
Nat Commun, 13, 2022
4YJK
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BU of 4yjk by Molmil
Crystal structure of C212S mutant of Shewanella oneidensis MR-1 uridine phosphorylase
Descriptor: SULFATE ION, URACIL, Uridine phosphorylase
Authors:Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Dorovatovsky, P.V, Veiko, V.P, Popov, V.O, Polyakov, K.M.
Deposit date:2015-03-03
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Concerted action of two subunits of the functional dimer of Shewanella oneidensis MR-1 uridine phosphorylase derived from a comparison of the C212S mutant and the wild-type enzyme.
Acta Crystallogr D Struct Biol, 72, 2016
4YK8
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BU of 4yk8 by Molmil
Crystal structure of the Atg101-Atg13 complex from fission yeast
Descriptor: Autophagy protein 13, Meiotically up-regulated gene 66 protein
Authors:Suzuki, H, Noda, N.N.
Deposit date:2015-03-04
Release date:2015-06-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Atg101-Atg13 complex reveals essential roles of Atg101 in autophagy initiation.
Nat.Struct.Mol.Biol., 22, 2015
1D3V
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BU of 1d3v by Molmil
CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH 2(S)-AMINO-6-BORONOHEXANOIC ACID, AN L-ARGININE ANALOG
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, MANGANESE (II) ION, PROTEIN (ARGINASE)
Authors:Cox, J.D, Kim, N.N, Traish, A.M, Christianson, D.W.
Deposit date:1999-10-01
Release date:1999-11-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Arginase-boronic acid complex highlights a physiological role in erectile function.
Nat.Struct.Biol., 6, 1999
4DML
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BU of 4dml by Molmil
3-oxoacyl-[acyl-carrier-protein] reductase from Synechococcus elongatus PCC 7942
Descriptor: 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Chen, C, Zhuang, N.N, Lee, K.H.
Deposit date:2012-02-08
Release date:2012-02-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3-oxoacyl-[acyl-carrier-protein] reductase from Synechococcus elongatus PCC 7942
to be published
2JK0
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BU of 2jk0 by Molmil
Structural and functional insights into Erwinia carotovora L- asparaginase
Descriptor: ASPARTIC ACID, L-ASPARAGINASE
Authors:Papageorgiou, A.C, Posypanova, G.A, Andersson, C.S, Sokolov, N.N, Krasotkina, J.
Deposit date:2008-05-23
Release date:2008-08-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Functional Insights Into Erwinia Carotovora L-Asparaginase.
FEBS J., 275, 2008
4N9O
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BU of 4n9o by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the human prion protein bound to a Nanobody
Descriptor: Major prion protein, Nanobody Nb484
Authors:Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
Deposit date:2013-10-21
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014

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