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PDB: 17170 results

9GLE
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BU of 9gle by Molmil
Jumonji domain-containing protein 2A with crystallization epitope mutations A91T:T93S
Descriptor: 1,2-ETHANEDIOL, Lysine-specific demethylase 4A, NICKEL (II) ION, ...
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-27
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To be published
9BBL
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BU of 9bbl by Molmil
THF filament generated from 4E-Tau(297-407) under neutral Mg2+ condition
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Duan, P, El Mammeri, N.
Deposit date:2024-04-06
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Milligram-scale assembly and NMR fingerprint of tau fibrils adopting the Alzheimer's disease fold.
J.Biol.Chem., 300, 2024
9CLY
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BU of 9cly by Molmil
Crystal structure of the 3-ketoacyl-(acyl-carrier-protein) reductase, CylG, from Streptococcus agalactiae 2603V/R
Descriptor: CylG protein, IMIDAZOLE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-07-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of the 3-ketoacyl-(acyl-carrier-protein) reductase, CylG, from Streptococcus agalactiae 2603V/R
To be published
9B3S
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BU of 9b3s by Molmil
Crystal structure of casein kinase 1 delta 1 with tethered phosphorylated tail
Descriptor: Casein kinase I isoform delta
Authors:Harold, R.L, Yaitanes, N, Tripathi, S.T, Partch, C.L.
Deposit date:2024-03-20
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Isoform-specific C-terminal phosphorylation drives autoinhibition of Casein kinase 1.
Proc.Natl.Acad.Sci.USA, 121, 2024
9AU1
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BU of 9au1 by Molmil
SARS-CoV-2 XBB.1.5 RBD bound to the VIR-7229 and the S309 Fab fragments
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Rietz, T, Park, Y.J, Errico, J, Czudnochowski, N, Nix, J.C, Corti, D, Snell, G, Marco, A.D, Pinto, D, Cameroni, E, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D, Structural Genomics Consortium (SGC)
Deposit date:2024-02-27
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:A potent pan-sarbecovirus neutralizing antibody resilient to epitope diversification.
Cell, 2024
9FOY
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BU of 9foy by Molmil
Ternary complex of a Mycobacterium tuberculosis DNA gyrase core fusion with DNA and the inhibitor AMK32b
Descriptor: (1~{R})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol, (1~{S})-2-[4-[[4-bromanyl-3,5-bis(fluoranyl)phenyl]methylamino]cyclohexyl]-1-(6-methoxy-1,5-naphthyridin-4-yl)ethanol, DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*G)-3'), ...
Authors:Kokot, M, Hrast, M, Feng, L, Mitchenall, L.A, Lawson, D.M, Maxwell, A, Minovski, N, Anderluh, M.
Deposit date:2024-06-12
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Unraveling the Mycobacterium tuberculosis DNA gyrase-DNA-NBTI complex
To be published
9F7X
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BU of 9f7x by Molmil
Human PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol B (BPB)
Descriptor: Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, bisphenol-B
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
9GMO
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BU of 9gmo by Molmil
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Descriptor: 28S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5.8S rRNA, ...
Authors:Bothe, A, Ban, N, Kostova, K.
Deposit date:2024-08-29
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:ZNF574 is a Quality Control Factor For Defective Ribosome Biogenesis Intermediates.
Biorxiv, 2024
9BZR
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BU of 9bzr by Molmil
Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with clavulonate
Descriptor: CHLORIDE ION, MALONIC ACID, N-(2-HYDROXY-4-OXO-BUTYL)-N-(3-OXO-TRANSPROPENYL)AMINE, ...
Authors:Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-05-24
Release date:2024-06-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Class A Beta-lactamase from Bordetella bronchiseptica RB50 in a complex with clavulonate
To Be Published
9FJL
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BU of 9fjl by Molmil
Sulfolobus acidocaldarius NusA2 structure
Descriptor: Transcription elongation factor NusA, ZINC ION
Authors:Pilotto, S, Phung, D.K, Pinotsis, N.
Deposit date:2024-05-31
Release date:2024-09-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure, function and evolution of crenarchaeal NusA2
To Be Published
8YXI
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BU of 8yxi by Molmil
Crystal structure of SFTSV Gn in complex with a neutralizing antibody 40C10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yang, P, Guo, Y, Zhang, N.
Deposit date:2024-04-02
Release date:2024-09-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular mechanism and structure-guided humanization of a broadly neutralizing antibody against SFTSV.
Plos Pathog., 20, 2024
9F7W
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BU of 9f7w by Molmil
Humman PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol A (BPA)
Descriptor: 4,4'-PROPANE-2,2-DIYLDIPHENOL, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
9FYD
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BU of 9fyd by Molmil
tubulin - cryptophycin-uD[Dab] complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Dessin, C, Schachtsiek, T, Voss, J, Abel, A.-C, Neumann, B, Stammler, H.-G, Prota, A.E, Sewald, N.
Deposit date:2024-07-03
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Highly Cytotoxic Cryptophycin Derivatives with Modification in Unit D for Conjugation.
Angew.Chem.Int.Ed.Engl., 2024
8ZYN
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BU of 8zyn by Molmil
Cryo-EM Structure of inhibitor-free hERG Channel
Descriptor: Potassium voltage-gated channel subfamily H member 2
Authors:Miyashita, Y, Moriya, T, Kato, T, Kawasaki, M, Yasuda, Y, Adachi, N, Suzuki, K, Ogasawara, S, Saito, T, Senda, T, Murata, T.
Deposit date:2024-06-18
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Improved higher resolution cryo-EM structures reveal the binding modes of hERG channel inhibitors.
Structure, 2024
9EU5
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BU of 9eu5 by Molmil
SSX structure of Autotaxin at room temperature
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7alpha-hydroxycholesterol, CALCIUM ION, ...
Authors:Eymery, M.C, McCarthy, A.A, Foos, N, Basu, S.
Deposit date:2024-03-27
Release date:2024-07-31
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:In situ serial crystallography facilitates 96-well plate structural analysis at low symmetry.
Iucrj, 11, 2024
8ZYP
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BU of 8zyp by Molmil
Cryo-EM Structure of E-4031-bound hERG Channel
Descriptor: Potassium voltage-gated channel subfamily H member 2, ~{N}-[4-[1-[2-(6-methylpyridin-2-yl)ethyl]piperidin-4-yl]carbonylphenyl]methanesulfonamide
Authors:Miyashita, Y, Moriya, T, Kato, T, Kawasaki, M, Yasuda, Y, Adachi, N, Suzuki, K, Ogasawara, S, Saito, T, Senda, T, Murata, T.
Deposit date:2024-06-18
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Improved higher resolution cryo-EM structures reveal the binding modes of hERG channel inhibitors.
Structure, 2024
9GP4
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BU of 9gp4 by Molmil
Jumonji domain-containing protein 2A with crystallization epitope mutations Q953E:A958D
Descriptor: 1,2-ETHANEDIOL, Lysine-specific demethylase 4A, SULFATE ION
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-09-06
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To be published
9FBF
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BU of 9fbf by Molmil
VDR complex with UG-481
Descriptor: (1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(1~{S})-5-methyl-1-[(1~{R},2~{R})-2-(3-methyl-3-oxidanyl-butyl)cyclopropyl]-5-oxidanyl-hexyl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
Authors:Rochel, N.
Deposit date:2024-05-13
Release date:2024-06-19
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Design, Synthesis, and Biological Evaluation of New Type of Gemini Analogues with a Cyclopropane Moiety in Their Side Chain.
J.Med.Chem., 67, 2024
9D6K
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BU of 9d6k by Molmil
Nitrile hydratase BR157A mutant
Descriptor: Cobalt-containing nitrile hydratase subunit alpha, Cobalt-containing nitrile hydratase subunit beta, OXYGEN ATOM
Authors:Miller, C.G, Holz, R.C, Liu, D, Kaley, N.
Deposit date:2024-08-15
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Role of second-sphere arginine residues in metal binding and metallocentre assembly in nitrile hydratases.
J Inorg Biochem, 256, 2024
9GH3
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BU of 9gh3 by Molmil
pleckstrin homology domain interacting protein with crystallization epitope mutations L1408N:R1409E
Descriptor: 1,2-ETHANEDIOL, PH-interacting protein
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-14
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To Be Published
9CC2
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BU of 9cc2 by Molmil
Cryo-EM structure of mouse PI(4,5)P2-bound TRPML1 channel at 2.46 Angstrom resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Mucolipin-1, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate, ...
Authors:Gan, N, Jiang, Y.
Deposit date:2024-06-20
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.46 Å)
Cite:TRPML1 gating modulation by allosteric mutations and lipids.
Biorxiv, 2024
2KDU
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BU of 2kdu by Molmil
Structural basis of the Munc13-1/Ca2+-Calmodulin interaction: A novel 1-26 calmodulin binding motif with a bipartite binding mode
Descriptor: CALCIUM ION, Calmodulin, Protein unc-13 homolog A
Authors:Rodriguez-Castaneda, F.A, Maestre-Martinez, M, Coudevylle, N, Dimova, K, Jahn, O, Junge, H, Becker, S, Brose, N, Carlomagno, T, Griesinger, C.
Deposit date:2009-01-19
Release date:2009-12-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Modular architecture of Munc13/calmodulin complexes: dual regulation by Ca2+ and possible function in short-term synaptic plasticity.
Embo J., 29, 2010
9DCG
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BU of 9dcg by Molmil
Crystal Structure of the Thiol:Disulfide Interchange Protein DsbC from Vibrio cholerae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Kim, Y, Maltseva, N, Shatsman, S, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-08-26
Release date:2024-09-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure of the Thiol:Disulfide Interchange Protein DsbC from Vibrio cholerae
To Be Published
9GII
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BU of 9gii by Molmil
Jumonji domain-containing protein 2A with crystallization epitope mutation R913A
Descriptor: GLYCEROL, Lysine-specific demethylase 4A, SULFATE ION
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-19
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To be published
5CBT
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BU of 5cbt by Molmil
Human Cyclophilin D Complexed with Inhibitor
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, POTASSIUM ION, ...
Authors:Gibson, R.P, Shore, E, Kershaw, N, Awais, M, Javed, A, Latawiec, D, Pandalaneni, S, Wen, L, Berry, N, O'Neill, P, Sutton, R, Lian, L.Y.
Deposit date:2015-07-01
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Human Cyclophilin D Complexed with Inhibitor
To Be Published

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PDB entries from 2024-10-30

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