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PDB: 90 results

3Q1R
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BU of 3q1r by Molmil
Crystal structure of a bacterial RNase P holoenzyme in complex with TRNA and in the presence of 5' leader
Descriptor: MAGNESIUM ION, RNase P RNA, Ribonuclease P protein component, ...
Authors:Reiter, N.J, Ostermanm, A, Torres-Larios, A, Swinger, K.K, Pan, T, Mondragon, A.
Deposit date:2010-12-17
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4.21 Å)
Cite:Structure of a Bacterial Ribonuclease P Holoenzyme in Complex with tRNA.
Nature, 468, 2010
2O19
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BU of 2o19 by Molmil
Structure of E. coli topoisomersae III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 5.5
Descriptor: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', ACETIC ACID, CHLORIDE ION, ...
Authors:Changela, A, DiGate, R, Mondragon, A.
Deposit date:2006-11-28
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Studies of E. coli Topoisomerase III-DNA Complexes Reveal a Novel Type IA Topoisomerase-DNA Conformational Intermediate.
J.Mol.Biol., 368, 2007
2O59
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BU of 2o59 by Molmil
Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol pH 8.0
Descriptor: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', ACETIC ACID, CHLORIDE ION, ...
Authors:Changela, A, DiGate, R.J, Mondragon, A.
Deposit date:2006-12-05
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of E. coli Topoisomerase III-DNA Complexes Reveal a Novel Type IA Topoisomerase-DNA Conformational Intermediate.
J.Mol.Biol., 368, 2007
2O54
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BU of 2o54 by Molmil
Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glycerol at pH 7.0
Descriptor: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', ACETIC ACID, CHLORIDE ION, ...
Authors:Changela, A, Digate, R.J, Mondragon, A.
Deposit date:2006-12-05
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of E. coli Topoisomerase III-DNA Complexes Reveal a Novel Type IA Topoisomerase-DNA Conformational Intermediate.
J.Mol.Biol., 368, 2007
2O5E
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BU of 2o5e by Molmil
Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 7.0
Descriptor: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', CHLORIDE ION, DNA topoisomerase 3, ...
Authors:Changela, A, DiGate, R.J, Mondragon, A.
Deposit date:2006-12-05
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of E. coli Topoisomerase III-DNA Complexes Reveal a Novel Type IA Topoisomerase-DNA Conformational Intermediate.
J.Mol.Biol., 368, 2007
2O5C
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BU of 2o5c by Molmil
Structure of E. coli topoisomerase III in complex with an 8-base single stranded oligonucleotide. Frozen in glucose pH 5.5
Descriptor: 5'-D(*CP*GP*CP*AP*AP*CP*TP*T)-3', CHLORIDE ION, DNA topoisomerase 3, ...
Authors:Changela, A, DiGate, R.J, Mondragon, A.
Deposit date:2006-12-05
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Studies of E. coli Topoisomerase III-DNA Complexes Reveal a Novel Type IA Topoisomerase-DNA Conformational Intermediate.
J.Mol.Biol., 368, 2007
3UD2
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BU of 3ud2 by Molmil
Crystal structure of Selenomethionine ZU5A-ZU5B protein domains of human erythrocyte ankyrin
Descriptor: Ankyrin-1, CHLORIDE ION, ETHANOL, ...
Authors:Yasunaga, M, Ipsaro, J.J, Mondragon, A.
Deposit date:2011-10-27
Release date:2012-02-22
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structurally Similar but Functionally Diverse ZU5 Domains in Human Erythrocyte Ankyrin.
J.Mol.Biol., 417, 2012
1CY7
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BU of 1cy7 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'-THYMIDINE MONOPHOSPHATE
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
3M4A
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BU of 3m4a by Molmil
Crystal structure of a bacterial topoisomerase IB in complex with DNA reveals a secondary DNA binding site
Descriptor: ACETIC ACID, DNA (5'-D(*GP*AP*AP*TP*AP*AP*GP*GP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*CP*CP*TP*TP*AP*TP*TP*C)-3'), ...
Authors:Patel, A, Yakovleva, L, Shuman, S, Mondragon, A.
Deposit date:2010-03-10
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a bacterial topoisomerase IB in complex with DNA reveals a secondary DNA binding site.
Structure, 18, 2010
1CY6
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BU of 1cy6 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 3' THYMIDINE MONOPHOSPHATE
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3'-PHOSPHATE
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
1CY1
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BU of 1cy1 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'PTPTPT
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3',5'-DIPHOSPHATE, ...
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
1CY4
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BU of 1cy4 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'pTpTpTp3'
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-5'-PHOSPHATE
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
1ECL
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BU of 1ecl by Molmil
AMINO TERMINAL 67KDA DOMAIN OF ESCHERICHIA COLI DNA TOPOISOMERASE I (RESIDUES 2-590 OF MATURE PROTEIN) CLONING ARTIFACT ADDS TWO RESIDUES TO THE AMINO-TERMINUS WHICH WERE NOT OBSERVED IN THE EXPERIMENTAL ELECTRON DENSITY (GLY-2, SER-1).
Descriptor: ESCHERICHIA COLI TOPOISOMERASE I
Authors:Lima, C.D, Wang, J.C, Mondragon, A.
Deposit date:1995-05-05
Release date:1995-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three-dimensional structure of the 67K N-terminal fragment of E. coli DNA topoisomerase I.
Nature, 367, 1994
3K7R
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BU of 3k7r by Molmil
Crystal structure of [TM][CuAtx1]3
Descriptor: COPPER (II) ION, D-MALATE, Metal homeostasis factor ATX1, ...
Authors:Xue, Y, Alvarez, H.M, Robinson, C.D, Mondragon, A, O'Halloran, T.V.
Deposit date:2009-10-13
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Tetrathiomolybdate inhibits copper trafficking proteins through metal cluster formation.
Science, 327, 2010
3KBT
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BU of 3kbt by Molmil
Crystal structure of the ankyrin binding domain of human erythroid beta spectrin (repeats 13-15) in complex with the spectrin binding domain of human erythroid ankyrin (ZU5-ANK)
Descriptor: Ankyrin-1, Spectrin beta chain, erythrocyte
Authors:Ipsaro, J.J, Mondragon, A.
Deposit date:2009-10-20
Release date:2010-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for spectrin recognition by ankyrin.
Blood, 115, 2010
3KBU
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BU of 3kbu by Molmil
Crystal structure of the ankyrin binding domain of human erythroid beta spectrin (repeats 13-15) in complex with the spectrin binding domain of human erythroid ankyrin (ZU5-ANK), EMTS derivative
Descriptor: Ankyrin-1, MERCURY (II) ION, Spectrin beta chain, ...
Authors:Ipsaro, J.J, Mondragon, A.
Deposit date:2009-10-20
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for spectrin recognition by ankyrin.
Blood, 115, 2010
1MW8
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BU of 1mw8 by Molmil
Crystal Structure of a Complex between H365R mutant of 67 kDA N-terminal fragment of E. coli DNA Topoisomerase I and 5'-ACTTCGGGATG-3'
Descriptor: 5'-D(*AP*CP*TP*TP*CP*GP*GP*GP*AP*TP*G)-3', DNA Topoisomerase I, SULFATE ION, ...
Authors:Perry, K, Mondragon, A.
Deposit date:2002-09-27
Release date:2003-10-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Complex between E. coli DNA Topoisomerase I and Single-Stranded DNA.
Structure, 11, 2003
1MW9
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BU of 1mw9 by Molmil
Crystal Structure of H365R mutant of 67 kDA N-terminal fragment of E. coli DNA Topoisomerase I
Descriptor: DNA Topoisomerase I, SULFATE ION
Authors:Perry, K, Mondragon, A.
Deposit date:2002-09-27
Release date:2003-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of a Complex between E. coli DNA Topoisomerase I and Single-Stranded DNA.
Structure, 11, 2003
1VCC
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BU of 1vcc by Molmil
AMINO TERMINAL 9KDA DOMAIN OF VACCINIA VIRUS DNA TOPOISOMERASE I RESIDUES 1-77, EXPERIMENTAL ELECTRON DENSITY FOR RESIDUES 1-77
Descriptor: DNA TOPOISOMERASE I
Authors:Sharma, A, Hanai, R, Mondragon, A.
Deposit date:1995-10-02
Release date:1996-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the amino-terminal fragment of vaccinia virus DNA topoisomerase I at 1.6 A resolution.
Structure, 2, 1994
1OIS
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BU of 1ois by Molmil
YEAST DNA TOPOISOMERASE I, N-TERMINAL FRAGMENT
Descriptor: DNA TOPOISOMERASE I
Authors:Lue, N, Sharma, A, Mondragon, A, Wang, J.C.
Deposit date:1996-09-14
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A 26 kDa yeast DNA topoisomerase I fragment: crystallographic structure and mechanistic implications.
Structure, 3, 1995
1CY9
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BU of 1cy9 by Molmil
CRYSTAL STRUCTURE OF THE 30 KDA FRAGMENT OF E. COLI DNA TOPOISOMERASE I. MONOCLINIC FORM
Descriptor: DNA TOPOISOMERASE I
Authors:Feinberg, H, Lima, C, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational changes in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
1Q09
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BU of 1q09 by Molmil
Crystal structure of the Zn(II) form of E. coli ZntR, a zinc-sensing transcriptional regulator (space group I4122)
Descriptor: SULFATE ION, ZINC ION, Zn(II)-responsive regulator of zntA
Authors:Changela, A, Chen, K, Xue, Y, Holschen, J, Outten, C.E, O'Halloran, T.V, Mondragon, A.
Deposit date:2003-07-15
Release date:2003-09-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
Science, 301, 2003
1Q0A
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BU of 1q0a by Molmil
Crystal structure of the Zn(II) form of E. coli ZntR, a zinc-sensing transcriptional regulator (space group C222)
Descriptor: SULFATE ION, ZINC ION, Zn(II)-responsive regulator of zntA
Authors:Changela, A, Chen, K, Xue, Y, Holschen, J, Outten, C.E, O'Halloran, T.V, Mondragon, A.
Deposit date:2003-07-15
Release date:2003-09-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
Science, 301, 2003
1Q06
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BU of 1q06 by Molmil
Crystal structure of the Ag(I) form of E. coli CueR, a copper efflux regulator
Descriptor: SILVER ION, Transcriptional regulator cueR
Authors:Changela, A, Chen, K, Xue, Y, Holschen, J, Outten, C.E, O'Halloran, T.V, Mondragon, A.
Deposit date:2003-07-15
Release date:2003-09-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
Science, 301, 2003
1Q08
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BU of 1q08 by Molmil
Crystal structure of the Zn(II) form of E. coli ZntR, a zinc-sensing transcriptional regulator, at 1.9 A resolution (space group P212121)
Descriptor: MAGNESIUM ION, PHOSPHATE ION, ZINC ION, ...
Authors:Changela, A, Chen, K, Xue, Y, Holschen, J, Outten, C.E, O'Halloran, T.V, Mondragon, A.
Deposit date:2003-07-15
Release date:2003-09-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
Science, 301, 2003

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