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PDB: 1323 results

6FYH
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BU of 6fyh by Molmil
Disulfide between ubiquitin G76C and the E3 HECT ligase Huwe1
Descriptor: E3 ubiquitin-protein ligase HUWE1, Polyubiquitin-B, SULFATE ION, ...
Authors:Jaeckl, M, Hartmann, M.D, Wiesner, S.
Deposit date:2018-03-12
Release date:2018-07-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:beta-Sheet Augmentation Is a Conserved Mechanism of Priming HECT E3 Ligases for Ubiquitin Ligation.
J. Mol. Biol., 430, 2018
4EEH
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BU of 4eeh by Molmil
Hsp90 Alpha N-terminal Domain in Complex with an Inhibitor 3-(4-Hydroxy-phenyl)-1H-indazol-6-ol
Descriptor: 3-(4-hydroxyphenyl)-1H-indazol-6-ol, Heat shock protein HSP 90-alpha, SULFATE ION
Authors:Musil, D, Lehmann, M, Graedler, U, Buchstaller, H.-P.
Deposit date:2012-03-28
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fragment-based discovery of hydroxy-indazole-carboxamides as novel small molecule inhibitors of Hsp90
Bioorg.Med.Chem.Lett., 22, 2012
5NEI
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BU of 5nei by Molmil
The structure of the polo-box domain (PBD) of polo-like kinase 1 (Plk1) in complex with JES107
Descriptor: 2-[[3-[[5-(3-iodanylphenyl)carbonylthiophen-2-yl]carbonylamino]phenyl]methyl]propanedioic acid, Serine/threonine-protein kinase PLK1
Authors:Kunciw, D.L, Rossmann, M, Stokes, J.E, De Fusco, C, Spring, D.R, Hyvonen, M.
Deposit date:2017-03-10
Release date:2018-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:A fragment-based approach to developing inhibitors of the cryptic pocket of the Polo-Like Kinase 1 Polo-Box Domain.
To Be Published
4EFT
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BU of 4eft by Molmil
Hsp90 Alpha N-terminal Domain in Complex with an Inhibitor 3-Cyclohexyl-2-(6-hydroxy-1H-indazol-3-yl)-propionitrile
Descriptor: (2R)-3-cyclohexyl-2-(6-hydroxy-1H-indazol-3-yl)propanenitrile, Heat shock protein HSP 90-alpha
Authors:Musil, D, Lehmann, M, Graedler, U, Buchstaller, H.-P.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Fragment-based discovery of hydroxy-indazole-carboxamides as novel small molecule inhibitors of Hsp90
Bioorg.Med.Chem.Lett., 22, 2012
8AZD
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BU of 8azd by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with ADPR
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Papain-like protease nsp3
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-05
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in the apo form
To Be Published
8AZL
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BU of 8azl by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-2'-fluoro-ADPR
Descriptor: 2'-deoxyadenosine 5'-fluoro-diphosphoribose, Papain-like protease nsp3
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-2'-fluoro-ADPR
To Be Published
8AZN
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BU of 8azn by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with alpha-1-O-Me-ADPR
Descriptor: Adenosine 5'-diphosphoric acid beta-[(3beta,4beta-dihydroxy-5beta-methoxytetrahydrofuran-2alpha-yl)methyl] estere, Papain-like protease nsp3
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in complex with alpha-1-O-Me-ADPR
To Be Published
8AZI
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BU of 8azi by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-ADPR
Descriptor: 2'-deoxyadenosine 5'-diphosphoribose, Papain-like protease nsp3
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in the apo form
To Be Published
8AZM
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BU of 8azm by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 8Br-ADPR
Descriptor: 8-bromoadenosine 5'-diphosphoribose, Papain-like protease nsp3
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in complex with 8Br-ADPR
To Be Published
8AZP
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BU of 8azp by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-methyl-ADP
Descriptor: Papain-like protease nsp3, beta-methyl-adenosine diphosphate
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-methyl-ADP
To Be Published
8AZO
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BU of 8azo by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-ethyl-ADP
Descriptor: Papain-like protease nsp3, beta-ethyl-adenosine diphosphate
Authors:Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
Deposit date:2022-09-06
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-ethyl-ADP
To Be Published
6WDT
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BU of 6wdt by Molmil
Enterovirus D68 in complex with human monoclonal antibody EV68-228
Descriptor: EV68-228 heavy chain, EV68-228 light chain, viral protein 1, ...
Authors:Fu, J, Vogt, M.R, Klose, T, Crowe, J.E, Rossmann, M.G, Kuhn, R.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-01
Release date:2020-07-15
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Human antibodies neutralize enterovirus D68 and protect against infection and paralytic disease.
Sci Immunol, 5, 2020
6CV5
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BU of 6cv5 by Molmil
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
Descriptor: viral protein 1, viral protein 2, viral protein 3, ...
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
8BC7
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BU of 8bc7 by Molmil
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aminoglutarimide degron peptide
Descriptor: Cereblon isoform 4, PHE-PHE-GLU-GLN-MET-GLN-QCI, S-Thalidomide, ...
Authors:Heim, C, Albrecht, R, Spring, A.K, Hartmann, M.D.
Deposit date:2022-10-15
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon.
Biochem.Biophys.Res.Commun., 637, 2022
6FWN
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BU of 6fwn by Molmil
Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor
Descriptor: von Willebrand factor
Authors:Xu, E.-R, von Buelow, S, Chen, P.-C, Lenting, P.J, Kolsek, K, Aponte-Santamaria, C, Simon, B, Foot, J, Obser, T, Graeter, F, Schneppenheim, R, Denis, C.V, Wilmanns, M, Hennig, J.
Deposit date:2018-03-06
Release date:2018-10-24
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor.
Blood, 133, 2019
6CV4
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BU of 6cv4 by Molmil
CryoEM structure of human enterovirus D68 emptied particle (after incubation with low molecular weight heparin)
Descriptor: viral protein 1, viral protein 2, viral protein 3
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
6CV2
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BU of 6cv2 by Molmil
CryoEM structure of human enterovirus D68 full virion
Descriptor: viral protein 1, viral protein 2, viral protein 3, ...
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
4BTI
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BU of 4bti by Molmil
factor Xa in complex with the dual thrombin-FXa inhibitor 58.
Descriptor: 5-Chloro-thiophene-2-carboxylic acid [(S)-2-[2-difluoromethoxy-3-(2-oxo-piperidin-1-yl)-benzenesulfonylamino]-3-((S)-3-dimethylamino-pyrrolidin-1-yl)-3-oxo-propyl]-amide, CALCIUM ION, COAGULATION FACTOR X HEAVY CHAIN, ...
Authors:Meneyrol, J, Follmann, M, Lassalle, G, Wehner, V, Barre, G, Rousseaux, T, Altenburger, J.M, Petit, F, Bocskei, Z, Stehlin-Gaon, C, Schreuder, H, Alet, N, Herault, J.-P, Millet, L, Dol, F, Hasbrand, C, Schaeffer, P, Sadoun, F, Klieber, S, Briot, C, Bono, F, Herbert, J.-M.
Deposit date:2013-06-18
Release date:2013-12-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:5-Chlorothiophene-2-Carboxylic Acid [(S)-2-[2-Methyl-3-(2-Oxopyrrolidin-1-Yl)Benzenesulfonylamino]-3-(4-Methylpiperazin-1-Yl)-3-Oxopropyl]Amide (Sar107375), a Selective and Potent Orally Active Dual Thrombin and Factor Xa Inhibitor.
J.Med.Chem., 56, 2013
4BTT
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BU of 4btt by Molmil
factor Xa in complex with the dual thrombin-FXa inhibitor 31.
Descriptor: CALCIUM ION, COAGULATION FACTOR X, COAGULATION FACTOR X LIGHT CHAIN, ...
Authors:Meneyrol, J, Follmann, M, Lassalle, G, Wehner, V, Barre, G, Rousseaux, T, Altenburger, J.M, Petit, F, Bocskei, Z, Stehlin-Gaon, C, Schreuder, H, Alet, N, Herault, J.-P, Millet, L, Dol, F, Hasbrand, C, Schaeffer, P, Sadoun, F, Klieber, S, Briot, C, Bono, F, Herbert, J.-M.
Deposit date:2013-06-19
Release date:2013-12-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:5-Chlorothiophene-2-Carboxylic Acid [(S)-2-[2-Methyl-3-(2-Oxopyrrolidin-1-Yl)Benzenesulfonylamino]-3-(4-Methylpiperazin-1-Yl)-3-Oxopropyl]Amide (Sar107375), a Selective and Potent Orally Active Dual Thrombin and Factor Xa Inhibitor.
J.Med.Chem., 56, 2013
4C47
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BU of 4c47 by Molmil
Salmonella enterica trimeric lipoprotein SadB
Descriptor: INNER MEMBRANE LIPOPROTEIN
Authors:Grin, I, Linke, D, Hartmann, M.D.
Deposit date:2013-09-02
Release date:2014-01-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.448 Å)
Cite:A Trimeric Lipoprotein Assists in Trimeric Autotransporter Biogenesis in Enterobacteria.
J.Biol.Chem., 289, 2014
6CV3
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BU of 6cv3 by Molmil
CryoEM structure of human enterovirus D68 emptied particle
Descriptor: viral protein 1, viral protein 2, viral protein 3
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
6CV1
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BU of 6cv1 by Molmil
CryoEM structure of human enterovirus D68 full particle (after incubation with heparin-derived hexasaccharide)
Descriptor: viral protein 1, viral protein 2, viral protein 3, ...
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
6CVB
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BU of 6cvb by Molmil
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Descriptor: N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, viral protein 1, viral protein 2, ...
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
4CTI
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BU of 4cti by Molmil
Escherichia coli EnvZ histidine kinase catalytic part fused to Archaeoglobus fulgidus Af1503 HAMP domain
Descriptor: OSMOLARITY SENSOR PROTEIN ENVZ, AF1503
Authors:Ferris, H.U, Coles, M, Lupas, A.N, Hartmann, M.D.
Deposit date:2014-03-13
Release date:2014-04-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.847 Å)
Cite:Crystallographic Snapshot of the Escherichia Coli Envz Histidine Kinase in an Active Conformation.
J.Struct.Biol., 186, 2014
4EFU
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BU of 4efu by Molmil
Hsp90 Alpha N-terminal Domain in Complex with an Inhibitor 6-Hydroxy-3-(3-methyl-benzyl)-1H-indazole-5-carboxylic acid benzyl-methyl-amide
Descriptor: Heat shock protein HSP 90-alpha, N-benzyl-6-hydroxy-N-methyl-3-(3-methylbenzyl)-1H-indazole-5-carboxamide, SULFATE ION
Authors:Musil, D, Lehmann, M, Graedler, U, Buchstaller, H.-P.
Deposit date:2012-03-30
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-based discovery of hydroxy-indazole-carboxamides as novel small molecule inhibitors of Hsp90
Bioorg.Med.Chem.Lett., 22, 2012

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