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PDB: 1205 件

1XOK
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crystal structure of alfalfa mosaic virus RNA 3'UTR in complex with coat protein N terminal peptide
分子名称: BROMIDE ION, Coat protein, alfalfa mosaic virus RNA 3' UTR
著者Guogas, L.M, Filman, D.J, Hogle, J.M, Gehrke, L.
登録日2004-10-06
公開日2005-01-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Cofolding organizes alfalfa mosaic virus RNA and coat protein for replication.
Science, 306, 2004
4RGF
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Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+
分子名称: MAGNESIUM ION, MANGANESE (II) ION, POTASSIUM ION, ...
著者Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
登録日2014-09-30
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2008 Å)
主引用文献In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
4RGE
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Crystal structure of the in-line aligned env22 twister ribozyme
分子名称: MAGNESIUM ION, env22 twister ribozyme
著者Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D.
登録日2014-09-30
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
6XHA
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Crystal Structure of KRAS-G12V (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF
分子名称: CHLORIDE ION, GLYCEROL, Isoform 2B of GTPase KRas, ...
著者Tran, T.H, Chan, A.H, Dharmaiah, S, Simanshu, D.K.
登録日2020-06-18
公開日2021-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.
Nat Commun, 12, 2021
3NF5
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Crystal structure of the C-terminal domain of nuclear pore complex component NUP116 from Candida glabrata
分子名称: GLYCEROL, Nucleoporin NUP116
著者Sampathkumar, P, Manglicmot, D, Bain, K, Gilmore, J, Gheyi, T, Rout, M, Sali, A, Atwell, S, Thompson, D.A, Emtage, J.S, Wasserman, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-06-09
公開日2010-08-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Atomic structure of the nuclear pore complex targeting domain of a Nup116 homologue from the yeast, Candida glabrata.
Proteins, 80, 2012
1YTR
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NMR structure of plantaricin a in dpc micelles, 20 structures
分子名称: Bacteriocin plantaricin A
著者Kristiansen, P.E, Fimland, G, Mantzilas, D, Nissen-Meyer, J.
登録日2005-02-11
公開日2005-05-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure and mode of action of the membrane-permeabilizing antimicrobial peptide pheromone plantaricin A
J.Biol.Chem., 280, 2005
3MML
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BU of 3mml by Molmil
Allophanate Hydrolase Complex from Mycobacterium smegmatis, Msmeg0435-Msmeg0436
分子名称: Allophanate hydrolase subunit 1, Allophanate hydrolase subunit 2, CHLORIDE ION
著者Kaufmann, M, Chernishof, I, Shin, A, Germano, D, Sawaya, M.R, Waldo, G.S, Arbing, M.A, Perry, J, Eisenberg, D, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
登録日2010-04-20
公開日2010-04-28
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of Allphanate Hydrolase Complex from M. smegmatis, Msmeg0435-Msmeg0436
To be Published
1CC8
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CRYSTAL STRUCTURE OF THE ATX1 METALLOCHAPERONE PROTEIN
分子名称: BENZAMIDINE, MERCURY (II) ION, PROTEIN (METALLOCHAPERONE ATX1)
著者Rosenzweig, A.C, Huffman, D.L, Pufahl, M.Y.R.A, Hou, T.V.O, Wernimont, A.K.
登録日1999-03-04
公開日1999-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Crystal structure of the Atx1 metallochaperone protein at 1.02 A resolution.
Structure Fold.Des., 7, 1999
1XV8
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Crystal Structure of Human Salivary Alpha-Amylase Dimer
分子名称: Alpha-amylase, CALCIUM ION, CHLORIDE ION
著者Fisher, S.Z, Govindasamy, L, Tu, C.K, Silverman, D.N, Rajaniemi, H, McKenna, R.
登録日2004-10-27
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of Human Salivary Alpha-Amylase Dimer
To be Published
4S14
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Crystal structure of the orphan nuclear receptor RORgamma ligand-binding domain in complex with 4alpha-caboxyl, 4beta-methyl-zymosterol (4ACD8)
分子名称: (3beta,4alpha,5beta,14beta)-3-hydroxy-4-methylcholesta-8,24-diene-4-carboxylic acid, Nuclear receptor ROR-gamma, Nuclear receptor-interacting protein 1
著者Huang, P, Santori, F.R, Littman, D.R, Rastinejad, F.
登録日2015-01-07
公開日2015-02-11
最終更新日2015-02-25
実験手法X-RAY DIFFRACTION (3.542 Å)
主引用文献Identification of Natural ROR gamma Ligands that Regulate the Development of Lymphoid Cells.
Cell Metab, 21, 2015
4RWH
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BU of 4rwh by Molmil
Crystal structure of T cell costimulatory ligand B7-1 (CD80)
分子名称: T-lymphocyte activation antigen CD80
著者Fedorov, A.A, Fedorov, E.V, Samanta, D, Hillerich, B, Seidel, R.D, Almo, S.C.
登録日2014-12-04
公開日2014-12-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of T cell costimulatory ligand B7-1 (CD80)
To be Published
6RV3
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BU of 6rv3 by Molmil
Crystal structure of the human two pore domain potassium ion channel TASK-1 (K2P3.1) in a closed conformation with a bound inhibitor BAY 1000493
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLESTEROL HEMISUCCINATE, DECYL-BETA-D-MALTOPYRANOSIDE, ...
著者Rodstrom, K.E.J, Pike, A.C.W, Zhang, W, Quigley, A, Speedman, D, Mukhopadhyay, S.M.M, Shrestha, L, Chalk, R, Venkaya, S, Bushell, S.R, Tessitore, A, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
登録日2019-05-30
公開日2019-08-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A lower X-gate in TASK channels traps inhibitors within the vestibule.
Nature, 582, 2020
3C3T
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BU of 3c3t by Molmil
Role of a Glutamate Bridge Spanning the Dimeric Interface of Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, SULFATE ION, Superoxide dismutase [Mn]
著者Quint, P.S, Domsic, J.F, Cabelli, D.E, McKenna, R, Silverman, D.N.
登録日2008-01-28
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Role of a glutamate bridge spanning the dimeric interface of human manganese superoxide dismutase.
Biochemistry, 47, 2008
3BJ8
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Spermine/spermidine N1-acetyltransferase from mouse: Crystal structure of a ternary complex reveals solvent-mediated spermine binding
分子名称: COENZYME A, Diamine acetyltransferase 1, SPERMINE
著者Montemayor, E.J, Hoffman, D.W.
登録日2007-12-03
公開日2008-09-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of spermidine/spermine N1-acetyltransferase in complex with spermine provides insights into substrate binding and catalysis.
Biochemistry, 47, 2008
1A56
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PRIMARY SEQUENCE AND SOLUTION CONFORMATION OF FERRICYTOCHROME C-552 FROM NITROSOMONAS EUROPAEA, NMR, MEAN STRUCTURE REFINED WITH EXPLICIT HYDROGEN BOND CONSTRAINTS
分子名称: FERRICYTOCHROME C-552, HEME C
著者Timkovich, R, Bergmann, D, Arciero, D.M, Hooper, A.B.
登録日1998-02-20
公開日1998-10-21
最終更新日2020-12-16
実験手法SOLUTION NMR
主引用文献Primary sequence and solution conformation of ferrocytochrome c-552 from Nitrosomonas europaea.
Biophys.J., 75, 1998
1PLG
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EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID
分子名称: IGG2A=KAPPA=
著者Evans, S.V, Sigurskjold, B.W, Jennings, H.J, Brisson, J.-R, Tse, W.C, To, R, Altman, E, Frosch, M, Weisgerber, C, Kratzin, H, Klebert, S, Vaesen, M, Bitter-Suermann, D, Rose, D.R, Young, N.M, Bundle, D.R.
登録日1995-04-24
公開日1996-04-03
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Evidence for the extended helical nature of polysaccharide epitopes. The 2.8 A resolution structure and thermodynamics of ligand binding of an antigen binding fragment specific for alpha-(2-->8)-polysialic acid.
Biochemistry, 34, 1995
5A3G
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Structure of herpesvirus nuclear egress complex subunit M50
分子名称: M50
著者Leigh, K.E, Boeszoermenyi, A, Mansueto, M.S, Sharma, M, Filman, D.J, Coen, D.M, Wagner, G, Hogle, J.M, Arthanari, H.
登録日2015-06-01
公開日2015-07-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure of a Herpesvirus Nuclear Egress Complex Subunit Reveals an Interaction Groove that is Essential for Viral Replication
Proc.Natl.Acad.Sci.USA, 112, 2015
3OT9
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Phosphopentomutase from Bacillus cereus bound to glucose-1,6-bisphosphate
分子名称: 1,6-di-O-phosphono-alpha-D-glucopyranose, GLYCEROL, MANGANESE (II) ION, ...
著者Panosian, T.D, Nannemann, D.P, Watkins, G, Phalen, V, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
登録日2010-09-10
公開日2010-12-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
3C3S
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Role of a Glutamate Bridge Spanning the Dimeric Interface of Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, SULFATE ION, Superoxide dismutase [Mn]
著者Quint, P.S, Domsic, J.F, Cabelli, D.E, McKenna, R, Silverman, D.N.
登録日2008-01-28
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Role of a glutamate bridge spanning the dimeric interface of human manganese superoxide dismutase.
Biochemistry, 47, 2008
2ADP
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Nitrated Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, POTASSIUM ION, Superoxide dismutase [Mn]
著者Quint, P, Reutzel, R, Mikulski, R, McKenna, R, Silverman, D.N.
登録日2005-07-20
公開日2006-07-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of nitrated human manganese superoxide dismutase: mechanism of inactivation.
FREE RADIC.BIOL.MED., 40, 2006
2ADQ
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Human Manganese Superoxide Dismutase
分子名称: MANGANESE (II) ION, POTASSIUM ION, Superoxide dismutase [Mn]
著者Quint, P, Reutzel, R, Mikulski, R, McKenna, R, Silverman, D.N.
登録日2005-07-20
公開日2006-07-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of nitrated human manganese superoxide dismutase: mechanism of inactivation.
FREE RADIC.BIOL.MED., 40, 2006
5HAF
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Structure of Salmonella enterica effector protein SseL
分子名称: Deubiquitinase SseL, POTASSIUM ION
著者Pruneda, J.N, Komander, D.
登録日2015-12-30
公開日2016-07-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases.
Mol.Cell, 63, 2016
2Y8I
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Structural basis for the allosteric interference of myosin function by mutants G680A and G680V of Dictyostelium myosin-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN-2 HEAVY CHAIN
著者Preller, M, Bauer, S, Adamek, N, Fujita-Becker, S, Fedorov, R, Geeves, M.A, Manstein, D.J.
登録日2011-02-07
公開日2011-07-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.132 Å)
主引用文献Structural Basis for the Allosteric Interference of Myosin Function by Reactive Thiol Region Mutations G680A and G680V.
J.Biol.Chem., 286, 2011
4OUD
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Engineered tyrosyl-tRNA synthetase with the nonstandard amino acid L-4,4-biphenylalanine
分子名称: TYROSINE, Tyrosyl-tRNA synthetase
著者Takeuchi, R, Mandell, D.J, Lajoie, M.J, Church, G.M, Stoddard, B.L.
登録日2014-02-16
公開日2015-01-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Biocontainment of genetically modified organisms by synthetic protein design.
Nature, 518, 2015
4OYK
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Structure of HOIP PUB domain bound to OTULIN PIM
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase RNF31, Ubiquitin thioesterase otulin
著者Elliott, P.R, Komander, D.
登録日2014-02-12
公開日2014-05-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.0001 Å)
主引用文献Molecular Basis and Regulation of OTULIN-LUBAC Interaction.
Mol.Cell, 54, 2014

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