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PDB: 50 results

7X4O
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BU of 7x4o by Molmil
Crystal structure of Vps17p PX from S. cerevisiae (Space)
Descriptor: SULFATE ION, Vacuolar protein sorting-associated protein 17
Authors:Maita, N, Kohda, D, Obita, T.
Deposit date:2022-03-03
Release date:2022-05-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of the PX domain of Vps17p from Saccharomyces cerevisiae.
Acta Crystallogr.,Sect.F, 78, 2022
1UEX
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BU of 1uex by Molmil
Crystal structure of von Willebrand Factor A1 domain complexed with snake venom bitiscetin
Descriptor: bitiscetin alpha chain, bitiscetin beta chain, von Willebrand Factor
Authors:Maita, N, Nishio, K, Nishimoto, E, Matsui, T, Shikamoto, Y, Morita, T, Sadler, J.E, Mizuno, H.
Deposit date:2003-05-22
Release date:2003-09-30
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of von Willebrand factor A1 domain complexed with snake venom, bitiscetin. Insight into glycoprotein Ibalpha binding mechanism induced by snake venom proteins.
J.Biol.Chem., 278, 2003
1IS8
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BU of 1is8 by Molmil
Crystal structure of rat GTPCHI/GFRP stimulatory complex plus Zn
Descriptor: GTP Cyclohydrolase I, GTP Cyclohydrolase I Feedback Regulatory Protein, PHENYLALANINE, ...
Authors:Maita, N, Okada, K, Hatakeyama, K, Hakoshima, T.
Deposit date:2001-11-18
Release date:2002-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the stimulatory complex of GTP cyclohydrolase I and its feedback regulatory protein GFRP.
Proc.Natl.Acad.Sci.USA, 99, 2002
1IS7
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BU of 1is7 by Molmil
Crystal structure of rat GTPCHI/GFRP stimulatory complex
Descriptor: GTP Cyclohydrolase I, GTP Cyclohydrolase I Feedback Regulatory Protein, PHENYLALANINE, ...
Authors:Maita, N, Okada, K, Hatakeyama, K, Hakoshima, T.
Deposit date:2001-11-18
Release date:2002-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the stimulatory complex of GTP cyclohydrolase I and its feedback regulatory protein GFRP.
Proc.Natl.Acad.Sci.USA, 99, 2002
2EI9
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BU of 2ei9 by Molmil
Crystal structure of R1Bm endonuclease domain
Descriptor: ACETIC ACID, Non-LTR retrotransposon R1Bmks ORF2 protein
Authors:Maita, N, Aoyagi, H, Osanai, M, Shirakawa, M, Fujiwara, H.
Deposit date:2007-03-12
Release date:2007-07-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of the sequence specificity of the R1Bm endonuclease domain by structural and biochemical studies.
Nucleic Acids Res., 35, 2007
1WDU
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BU of 1wdu by Molmil
Endonuclease domain of TRAS1, a telomere-specific non-LTR retrotransposon
Descriptor: CHLORIDE ION, PHOSPHATE ION, TRAS1 ORF2p
Authors:Maita, N, Anzai, T, Aoyagi, H, Mizuno, H, Fujiwara, H.
Deposit date:2004-05-17
Release date:2004-08-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the endonuclease domain encoded by the telomere-specific long interspersed nuclear element, TRAS1
J.Biol.Chem., 279, 2004
1WPL
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BU of 1wpl by Molmil
Crystal structure of the inhibitory form of rat GTP cyclohydrolase I/GFRP complex
Descriptor: 7,8-DIHYDROBIOPTERIN, GTP cyclohydrolase I, GTP cyclohydrolase I feedback regulatory protein, ...
Authors:Maita, N, Hatakeyama, K, Okada, K, Hakoshima, T.
Deposit date:2004-09-08
Release date:2004-09-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of biopterin-induced inhibition of GTP cyclohydrolase I by GFRP, its feedback regulatory protein
J.Biol.Chem., 279, 2004
6A43
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R1EN(5-225)-ubiquitin fusion
Descriptor: ACETIC ACID, RNA-directed DNA polymerase homolog (R1),Polyubiquitin-C
Authors:Maita, N.
Deposit date:2018-06-19
Release date:2018-10-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Determination of Ubiquitin by Fusion to a Protein That Forms a Highly Porous Crystal Lattice
J. Am. Chem. Soc., 140, 2018
6A44
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R1EN(5-227)-ubiquitin fusion
Descriptor: ACETIC ACID, RNA-directed DNA polymerase homolog (R1),Polyubiquitin-C
Authors:Maita, N.
Deposit date:2018-06-19
Release date:2018-10-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure Determination of Ubiquitin by Fusion to a Protein That Forms a Highly Porous Crystal Lattice
J. Am. Chem. Soc., 140, 2018
6A42
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R1EN(5-223)-ubiquitin fusion
Descriptor: ACETIC ACID, RNA-directed DNA polymerase homolog (R1),Polyubiquitin-C
Authors:Maita, N.
Deposit date:2018-06-19
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure Determination of Ubiquitin by Fusion to a Protein That Forms a Highly Porous Crystal Lattice
J. Am. Chem. Soc., 140, 2018
4Z2G
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BU of 4z2g by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 26
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {4-[N'-(methylcarbamoyl)carbamimidamido]butyl}carbamate, Chitinase B
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
4Z2L
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Serratia marcescens Chitinase B complexed with macrolide inhibitor 33
Descriptor: (3R,4S,5S,6R,7R,9R,10S,11S,12R,13S,14R)-14-ethyl-7,10,12,13-tetrahydroxy-3,5,7,9,11,13-hexamethyl-2-oxo-6-(prop-2-yn-1-yloxy)oxacyclotetradecan-4-yl {3-[N'-(methylcarbamoyl)carbamimidamido]propyl}carbamate, CHLORIDE ION, Chitinase B, ...
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
4Z2J
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BU of 4z2j by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 31
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {5-[N'-(methylcarbamoyl)carbamimidamido]pentyl}carbamate, Chitinase B, GLYCEROL, ...
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
4Z2I
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BU of 4z2i by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 30
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {3-[N'-(methylcarbamoyl)carbamimidamido]propyl}carbamate, Chitinase B, GLYCEROL, ...
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
4Z2K
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BU of 4z2k by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 32
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {7-[N'-(methylcarbamoyl)carbamimidamido]heptyl}carbamate, Chitinase B, GLYCEROL
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
4Z2H
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BU of 4z2h by Molmil
Serratia marcescens Chitinase B complexed with macrolide inhibitor 29
Descriptor: (1R,2R,3R,6R,7S,8S,9R,10R,12R,13S,17S)-3-ethyl-2,10-dihydroxy-2,6,8,10,12,15,15,17-octamethyl-5-oxo-9-(prop-2-yn-1-yloxy)-4,14,16-trioxabicyclo[11.3.1]heptadec-7-yl {2-[N'-(methylcarbamoyl)carbamimidamido]ethyl}carbamate, CHLORIDE ION, Chitinase B, ...
Authors:Maita, N, Sugawara, A, Sunazuka, T.
Deposit date:2015-03-30
Release date:2015-07-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Creation of Customized Bioactivity within a 14-Membered Macrolide Scaffold: Design, Synthesis, and Biological Evaluation Using a Family-18 Chitinase
J.Med.Chem., 58, 2015
3W82
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BU of 3w82 by Molmil
Human alpha-L-iduronidase in complex with iduronic acid
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
Authors:Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
Deposit date:2013-03-11
Release date:2013-08-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
3W81
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BU of 3w81 by Molmil
Human alpha-l-iduronidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
Authors:Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
Deposit date:2013-03-11
Release date:2013-08-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
2ZAI
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BU of 2zai by Molmil
Crystal structure of the soluble domain of STT3 from P. furiosus
Descriptor: CALCIUM ION, CHLORIDE ION, Oligosaccharyl transferase stt3 subunit related protein
Authors:Maita, N.
Deposit date:2007-10-05
Release date:2007-12-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-guided identification of a new catalytic motif of oligosaccharyltransferase
Embo J., 27, 2008
3AAG
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BU of 3aag by Molmil
Crystal structure of C. jejuni pglb C-terminal domain
Descriptor: CALCIUM ION, General glycosylation pathway protein
Authors:Maita, N, Kohda, D.
Deposit date:2009-11-16
Release date:2009-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Comparative structural biology of Eubacterial and Archaeal oligosaccharyltransferases.
J.Biol.Chem., 285, 2010
2ZAG
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BU of 2zag by Molmil
Crystal structure of the SeMet-substituted soluble domain of STT3 from P. furiosus
Descriptor: CALCIUM ION, CHLORIDE ION, Oligosaccharyl transferase stt3 subunit related protein
Authors:Maita, N.
Deposit date:2007-10-05
Release date:2007-12-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-guided identification of a new catalytic motif of oligosaccharyltransferase
Embo J., 27, 2008
8YBF
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BU of 8ybf by Molmil
Crystal structure of canine distemper virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin glycoprotein
Authors:Fukuhara, H, Yumoto, K, Sako, M, Kajikawa, M, Ose, T, Hashiguchi, T, Kamishikiryo, J, Maita, N, Kuroki, K, Maenaka, K.
Deposit date:2024-02-13
Release date:2024-07-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Glycan-shielded homodimer structure and dynamical features of the canine distemper virus hemagglutinin relevant for viral entry and efficient vaccination.
Elife, 12, 2024
7DMM
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BU of 7dmm by Molmil
Structure of a glucose isomerase crystal grown in an aqueous glycerol solution without any precipitants
Descriptor: CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Suzuki, Y, Maita, N.
Deposit date:2020-12-04
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Extraordinarily fast growth of high-quality glucose isomerase crystals simply by concentration in a precipitant-free solution with a cryoprotectant
To be published
6KBP
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BU of 6kbp by Molmil
Crystal structure of human D-amino acid oxidase mutant (P219L) complexed with benzoate
Descriptor: ACETATE ION, BENZOIC ACID, D-amino-acid oxidase, ...
Authors:Rachadech, W, Kato, Y, Maita, N, Fukui, K.
Deposit date:2019-06-26
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of human D-amino acid oxidase mutant (P219L) complexed with benzoate
To Be Published
6KD5
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BU of 6kd5 by Molmil
Crystal structure of the extracellular domain of MSPL/TMPRSS13 in complex with dec-RVKR-cmk inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, DECANOYL-ARG-VAL-LYS-ARG-CHLOROMETHYLKETONE INHIBITOR, ...
Authors:Ohno, A, Maita, N, Okumura, Y, Nikawa, T.
Deposit date:2019-06-30
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of inhibitor-bound human MSPL that can activate high pathogenic avian influenza.
Life Sci Alliance, 4, 2021

 

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