Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 286 results

8IFF
DownloadVisualize
BU of 8iff by Molmil
Cryo-EM structure of Arabidopsis phytochrome A.
Descriptor: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, Phytochrome A
Authors:Ma, L, Zhou, C, Wang, J, Guan, Z, Yin, P.
Deposit date:2023-02-17
Release date:2023-08-02
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Plant phytochrome A in the Pr state assembles as an asymmetric dimer.
Cell Res., 33, 2023
6M79
DownloadVisualize
BU of 6m79 by Molmil
Cryo-EM structure of Arabidopsis CRY under blue light-mediated activation
Descriptor: ADENOSINE MONOPHOSPHATE, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Ma, L, Guan, Z.Y, Yin, P.
Deposit date:2020-03-18
Release date:2020-10-14
Last modified:2021-08-04
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the photoactivation of Arabidopsis CRY2.
Nat.Plants, 6, 2020
1HQA
DownloadVisualize
BU of 1hqa by Molmil
ALKALINE PHOSPHATASE (H412Q)
Descriptor: ALKALINE PHOSPHATASE, ZINC ION
Authors:Ma, L, Kantrowitz, E.R.
Deposit date:1995-11-30
Release date:1996-03-08
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Kinetic and X-ray structural studies of a mutant Escherichia coli alkaline phosphatase (His-412-->Gln) at one of the zinc binding sites.
Biochemistry, 35, 1996
1FA4
DownloadVisualize
BU of 1fa4 by Molmil
ELUCIDATION OF THE PARAMAGNETIC RELAXATION OF HETERONUCLEI AND PROTONS IN CU(II) PLASTOCYANIN FROM ANABAENA VARIABILIS
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Ma, L, Jorgensen, A.M, Sorensen, G.O, Ulstrup, J, Led, J.J.
Deposit date:2000-07-12
Release date:2000-08-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Elucidation of the Paramagnetic R1 Relaxation of Heteronuclei and Protons in Cu(II) Plastocyanin from Anabaena Variabilis
J.Am.Chem.Soc., 122, 2000
1ALI
DownloadVisualize
BU of 1ali by Molmil
ALKALINE PHOSPHATASE MUTANT (H412N)
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ma, L, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-06-02
Release date:1995-11-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.
Protein Sci., 4, 1995
1ALJ
DownloadVisualize
BU of 1alj by Molmil
ALKALINE PHOSPHATASE MUTANT (H412N)
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ma, L, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-06-02
Release date:1995-11-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Escherichia coli alkaline phosphatase: X-ray structural studies of a mutant enzyme (His-412-->Asn) at one of the catalytically important zinc binding sites.
Protein Sci., 4, 1995
1R6R
DownloadVisualize
BU of 1r6r by Molmil
Solution Structure of Dengue Virus Capsid Protein Reveals a New Fold
Descriptor: Genome polyprotein
Authors:Ma, L, Jones, C.T, Groesch, T.D, Kuhn, R.J, Post, C.B.
Deposit date:2003-10-16
Release date:2004-02-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of dengue virus capsid protein reveals another fold
Proc.Natl.Acad.Sci.USA, 101, 2004
3LAS
DownloadVisualize
BU of 3las by Molmil
Crystal structure of carbonic anhydrase from streptococcus mutans to 1.4 angstrom resolution
Descriptor: GLYCEROL, GUANIDINE, MAGNESIUM ION, ...
Authors:Ma, L.-L, Wang, K.-T, Liu, X, Su, X.-D.
Deposit date:2010-01-07
Release date:2011-01-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of carbonic anhydrase from streptococcus mutans to 1.4 angstrom resolution
To be published
6A2B
DownloadVisualize
BU of 6a2b by Molmil
Crystal Structure of Xenopus laevis MHC I complex
Descriptor: Beta-2-microglobulin, MHC class I antigen, TYR-MET-MET-PRO-ARG-HIS-TRP-PRO-ILE
Authors:Ma, L.Z, Xia, C.
Deposit date:2018-06-10
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Glimpse of the Peptide Profile Presentation byXenopus laevisMHC Class I: Crystal Structure of pXela-UAA Reveals a Distinct Peptide-Binding Groove.
J Immunol., 204, 2020
6K8I
DownloadVisualize
BU of 6k8i by Molmil
Crystal structure of Arabidopsis thaliana CRY2
Descriptor: Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Ma, L, Wang, X, Guan, Z, Yin, P.
Deposit date:2019-06-12
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Structural insights into BIC-mediated inactivation of Arabidopsis cryptochrome 2.
Nat.Struct.Mol.Biol., 27, 2020
8DK4
DownloadVisualize
BU of 8dk4 by Molmil
Peroxisome proliferator-activated receptor gamma in complex with VSP-51-2
Descriptor: 5-(benzylcarbamoyl)-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-2-carboxylic acid, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Ma, L, Zhou, X.E, Suino-Powell, K, Hou, N, Zhou, Z, Luo, J, Xu, H.E, Yi, W.
Deposit date:2022-07-02
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of VSP-51-2 as the Novel and Safe PPAR gamma Modulator: Structure-Based Design, Biological Validation and Crystal Analysis
To Be Published
4ORB
DownloadVisualize
BU of 4orb by Molmil
Crystal structure of mouse calcineurin
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Ma, L, Li, S.J, Wang, J, Wu, J.W, Wang, Z.X.
Deposit date:2014-02-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.108 Å)
Cite:Cooperative autoinhibition and multi-level activation mechanisms of calcineurin
To be Published
4ORC
DownloadVisualize
BU of 4orc by Molmil
Crystal structure of mammalian calcineurin
Descriptor: CALCIUM ION, Calcineurin subunit B type 1, FE (III) ION, ...
Authors:Ma, L, Li, S.J, Wang, J, Wu, J.W, Wang, Z.X.
Deposit date:2014-02-11
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cooperative autoinhibition and multi-level activation mechanisms of calcineurin
To be Published
7XTQ
DownloadVisualize
BU of 7xtq by Molmil
Cryo-EM structure of the R399-bound GPBAR-Gs complex
Descriptor: G-protein coupled bile acid receptor 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Ma, L, Yang, F, Wu, X, Mao, C, Sun, J, Yu, X, Zhang, Y, Zhang, P.
Deposit date:2022-05-17
Release date:2022-07-06
Last modified:2022-08-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis and molecular mechanism of biased GPBAR signaling in regulating NSCLC cell growth via YAP activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VJS
DownloadVisualize
BU of 7vjs by Molmil
Human AlkB homolog ALKBH6 in complex with Tris and Ni
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6, NICKEL (II) ION
Authors:Ma, L, Chen, Z.
Deposit date:2021-09-28
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.792 Å)
Cite:Structural insights into the interactions and epigenetic functions of human nucleic acid repair protein ALKBH6.
J.Biol.Chem., 298, 2022
7VJV
DownloadVisualize
BU of 7vjv by Molmil
Human AlkB homolog ALKBH6 in complex with alpha-katoglutarate and Mn
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6, MANGANESE (II) ION
Authors:Ma, L, Chen, Z.
Deposit date:2021-09-29
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural insights into the interactions and epigenetic functions of human nucleic acid repair protein ALKBH6.
J.Biol.Chem., 298, 2022
2RHK
DownloadVisualize
BU of 2rhk by Molmil
Crystal structure of influenza A NS1A protein in complex with F2F3 fragment of human cellular factor CPSF30, Northeast Structural Genomics Targets OR8C and HR6309A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cleavage and polyadenylation specificity factor subunit 4, NITRATE ION, ...
Authors:Das, K, Ma, L.-C, Xiao, R, Radvansky, B, Aramini, J, Zhao, L, Arnold, E, Krug, R.M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-09
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for suppression of a host antiviral response by influenza A virus.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CER
DownloadVisualize
BU of 3cer by Molmil
Crystal structure of the exopolyphosphatase-like protein Q8G5J2. Northeast Structural Genomics Consortium target BlR13
Descriptor: Possible exopolyphosphatase-like protein, SULFATE ION
Authors:Kuzin, A.P, Su, M, Chen, Y, Neely, H, Seetharaman, J, Shastry, R, Fang, Y, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-02-29
Release date:2008-04-01
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the exopolyphosphatase-like protein Q8G5J2. Northeast Structural Genomics Consortium target BlR13.
To be Published
2RAQ
DownloadVisualize
BU of 2raq by Molmil
Crystal structure of the MTH889 protein from Methanothermobacter thermautotrophicus. Northeast Structural Genomics Consortium target TT205
Descriptor: CALCIUM ION, Conserved protein MTH889
Authors:Forouhar, F, Su, M, Xu, X, Seetharaman, J, Mao, L, Xiao, R, Ma, L.-C, Conover, K, Baran, M.C, Acton, T.B, Montelione, G.T, Arrowsmith, C.H, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-09-17
Release date:2007-10-16
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Crystal structure of the MTH889 protein from Methanothermobacter thermautotrophicus.
To be Published
2RJB
DownloadVisualize
BU of 2rjb by Molmil
Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276
Descriptor: Uncharacterized protein, ZINC ION
Authors:Seetharaman, J, Chen, Y, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xia, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-10-14
Release date:2007-10-30
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338.
To be Published
2GF4
DownloadVisualize
BU of 2gf4 by Molmil
Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14
Descriptor: ACETATE ION, CALCIUM ION, Protein Vng1086c
Authors:Benach, J, Zhou, W, Jayaraman, S, Forouhar, F.F, Janjua, H, Xiao, R, Ma, L.-C, Cunningham, K, Wang, D, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-03-21
Release date:2006-04-18
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14
To be Published
2GSV
DownloadVisualize
BU of 2gsv by Molmil
X-Ray Crystal Structure of Protein YvfG from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR478.
Descriptor: Hypothetical protein yvfG, SULFATE ION
Authors:Forouhar, F, Su, M, Jayaraman, S, Wang, D, Fang, Y, Cunningham, K, Conover, K, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-04-26
Release date:2006-05-09
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Hypothetical Protein YvfG from Bacillus subtilis, Northeast Structural Genomics Target SR478
To be Published
2H3R
DownloadVisualize
BU of 2h3r by Molmil
Crystal structure of ORF52 from Murid herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68). Northeast Structural Genomics Consortium target MhR28B.
Descriptor: Hypothetical protein BQLF2
Authors:Benach, J, Chen, Y, Seetharaman, J, Janjua, H, Xiao, R, Cunningham, K, Ma, L.-C, Ho, C.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-05-23
Release date:2006-08-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of ORF52 from Murid herpesvirus 4 (MuHV-4) (Murine gammaherpesvirus 68). Northeast Structural Genomics Consortium target MhR28B.
To be Published
2G7J
DownloadVisualize
BU of 2g7j by Molmil
Solution NMR structure of the putative cytoplasmic protein ygaC from Salmonella typhimurium. Northeast Structural Genomics target StR72.
Descriptor: putative cytoplasmic protein
Authors:Aramini, J.M, Swapna, G.V.T, Ramelot, T.A, Ho, C.K, Cunningham, K, Ma, L.-C, Shetty, K, Xiao, R, Acton, T.B, Kennedy, M.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-02-28
Release date:2006-05-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution NMR structure of the putative cytoplasmic protein ygaC from Salmonella typhimurium. Northeast Structural Genomics target StR72.
To be Published
4PY0
DownloadVisualize
BU of 4py0 by Molmil
Crystal structure of P2Y12 receptor in complex with 2MeSATP
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), P2Y purinoceptor 12, ...
Authors:Zhang, J, Zhang, K, Gao, Z.G, Paoletta, S, Zhang, D, Han, G.W, Li, T, Ma, L, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
Deposit date:2014-03-25
Release date:2014-04-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Agonist-bound structure of the human P2Y12 receptor
Nature, 509, 2014

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon