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PDB: 51964 results

6TK3
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BU of 6tk3 by Molmil
Femtosecond to millisecond structural changes in a light-driven sodium pump: 30us+150us structure of KR2 with extrapolated, light and dark datasets
Descriptor: EICOSANE, RETINAL, Sodium pumping rhodopsin
Authors:Skopintsev, P, Ehrenberg, D, Weinert, T, James, D, Kar, R, Johnson, P, Ozerov, D, Furrer, A, Martiel, I, Dworkowski, F, Nass, K, Knopp, G, Cirelli, C, Gashi, D, Mous, S, Wranik, M, Gruhl, T, Kekilli, D, Bruenle, S, Deupi, X, Schertler, G.F.X, Benoit, R, Panneels, V, Nogly, P, Schapiro, I, Milne, C, Heberle, J, Standfuss, J.
Deposit date:2019-11-28
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Femtosecond-to-millisecond structural changes in a light-driven sodium pump.
Nature, 583, 2020
3P1L
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BU of 3p1l by Molmil
Crystal structure of Escherichia coli BamB, a lipoprotein component of the beta-barrel assembly machinery complex, native crystals.
Descriptor: Lipoprotein yfgL, SODIUM ION
Authors:Kim, K.H, Paetzel, M.
Deposit date:2010-09-30
Release date:2010-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Escherichia coli BamB, a lipoprotein component of the beta-barrel assembly machinery complex, native crystals
J.Mol.Biol., 406, 2011
3DSY
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BU of 3dsy by Molmil
E(L212)Q mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ...
Authors:Pokkuluri, P.R, Schiffer, M.
Deposit date:2008-07-14
Release date:2009-06-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Restoring Proton transfer in L212Q mutant of photosynthetic reaction center
To be Published
4KDX
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BU of 4kdx by Molmil
Crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, bound gsh, ordered domains, space group p21, form(1)
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione S-transferase domain
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-04-25
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a glutathione transferase family member from burkholderia graminis, target efi-507264, bound gsh, ordered domains, space group P21, form(1)
To be Published
3P2J
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BU of 3p2j by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Kumar, A, Singh, A, Yadav, R, Sinha, M, Arora, A, Sharma, S, Singh, T.P.
Deposit date:2010-10-02
Release date:2010-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
To be Published
4K2A
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BU of 4k2a by Molmil
Crystal structure of haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Prudnikova, T, Chaloupkova, R, Rezacova, P, Mozga, T, Koudelakova, T, Sato, Y, Kuty, M, Nagata, Y, Damborsky, J, Kuta Smatanova, I, Structure 2 Function Project (S2F)
Deposit date:2013-04-08
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites.
Acta Crystallogr.,Sect.D, 70, 2014
3P2R
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BU of 3p2r by Molmil
Crystal structure of the fluoroacetyl-CoA-specific thioesterase FlK in complex with fluoroacetate
Descriptor: Fluoroacetyl coenzyme A thioesterase, fluoroacetic acid
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-03
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
3DQW
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BU of 3dqw by Molmil
c-Src kinase domain Thr338Ile mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Proto-oncogene tyrosine-protein kinase Src
Authors:Azam, M, Seeliger, M.A, Gray, N, Kuriyan, J, Daley, G.Q.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.017 Å)
Cite:Activation of tyrosine kinases by mutation of the gatekeeper threonine.
Nat.Struct.Mol.Biol., 15, 2008
4KER
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BU of 4ker by Molmil
Crystal structure of SsoPox W263V
Descriptor: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
Authors:Gotthard, G, Hiblot, J, Chabriere, E, Elias, M.
Deposit date:2013-04-26
Release date:2013-10-02
Last modified:2013-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Differential Active Site Loop Conformations Mediate Promiscuous Activities in the Lactonase SsoPox.
Plos One, 8, 2013
6GIW
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BU of 6giw by Molmil
Water-soluble Chlorophyll Protein (WSCP) from Lepidium virginicum (Mutation L91P) with Chlorophyll-a
Descriptor: CHLOROPHYLL A, Water-soluble chlorophyll protein
Authors:Palm, D.M, Agostini, A, Averesch, V, Girr, P, Werwie, M, Takahashi, S, Satoh, H, Jaenicke, E, Paulsen, H.
Deposit date:2018-05-15
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Chlorophyll a/b binding-specificity in water-soluble chlorophyll protein.
Nat Plants, 4, 2018
1K1X
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BU of 1k1x by Molmil
Crystal structure of 4-alpha-glucanotransferase from thermococcus litoralis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-ALPHA-GLUCANOTRANSFERASE, CALCIUM ION
Authors:Imamura, H, Fushinobu, S, Kumasaka, T, Yamamoto, M, Jeon, B.S, Wakagi, T, Matsuzawa, H.
Deposit date:2001-09-26
Release date:2003-06-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of 4-alpha-glucanotransferase from Thermococcus litoralis and its complex with an inhibitor
J.BIOL.CHEM., 278, 2003
6TLB
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BU of 6tlb by Molmil
Plasmodium falciparum lipocalin (PF3D7_0925900)
Descriptor: GLYCEROL, SODIUM ION, Serine/threonine protein kinase
Authors:Burda, P.C, Crosskey, T.D, Lauk, K, Wilmanns, M, Gilberger, T.W.
Deposit date:2019-12-02
Release date:2020-06-24
Last modified:2024-01-24
Method:SOLUTION SCATTERING (2.85 Å), X-RAY DIFFRACTION
Cite:Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum.
Cell Rep, 31, 2020
4K31
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BU of 4k31 by Molmil
Crystal structure of apramycin bound to the leishmanial rRNA A-site
Descriptor: APRAMYCIN, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Shalev, M, Kondo, J, Adir, N, Baasov, T.
Deposit date:2013-04-10
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.415 Å)
Cite:Identification of the molecular attributes required for aminoglycoside activity against Leishmania.
Proc.Natl.Acad.Sci.USA, 110, 2013
3DRM
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BU of 3drm by Molmil
2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin
Descriptor: Alpha-1-antitrypsin
Authors:Gooptu, B, Nobeli, I, Purkiss, A, Phillips, R.L, Mallya, M, Lomas, D.A, Barrett, T.E.
Deposit date:2008-07-11
Release date:2009-03-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic and cellular characterisation of two mechanisms stabilising the native fold of alpha1-antitrypsin: implications for disease and drug design.
J.Mol.Biol., 387, 2009
6TLY
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BU of 6tly by Molmil
Crystal structure of the unconventional kinetochore protein Bodo saltans KKT2 central domain
Descriptor: CHLORIDE ION, Protein kinase, putative, ...
Authors:Marciano, G, Nerusheva, O, Ishii, M, Akiyoshi, B.
Deposit date:2019-12-03
Release date:2019-12-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Kinetoplastid kinetochore proteins KKT2 and KKT3 have unique centromere localization domains.
J.Cell Biol., 220, 2021
4GFM
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BU of 4gfm by Molmil
JAK2 kinase (JH1 domain) with 2,6-DICHLORO-N-(2-OXO-2,5-DIHYDROPYRIDIN-4-YL)BENZAMIDE
Descriptor: 2,6-dichloro-N-(2-oxo-2,5-dihydropyridin-4-yl)benzamide, Tyrosine-protein kinase JAK2
Authors:Eigenbrot, C, Ultsch, M.
Deposit date:2012-08-03
Release date:2013-06-19
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Lead identification of novel and selective TYK2 inhibitors.
Eur.J.Med.Chem., 67, 2013
3DVF
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BU of 3dvf by Molmil
Structure of amyloidogenic kappa 1 Bence Jones protein
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-12
Authors:Randles, E.G, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2008-07-18
Release date:2009-05-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural alterations within native amyloidogenic immunoglobulin light chains.
J.Mol.Biol., 389, 2009
3P5P
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BU of 3p5p by Molmil
Crystal Structure of Taxadiene Synthase from Pacific Yew (Taxus brevifolia) in complex with Mg2+ and 13-aza-13,14-dihydrocopalyl diphosphate
Descriptor: 1,2-ETHANEDIOL, 2-(methyl{2-[(1S,4aS,8aS)-5,5,8a-trimethyl-2-methylidenedecahydronaphthalen-1-yl]ethyl}amino)ethyl trihydrogen diphosphate, MAGNESIUM ION, ...
Authors:Koksal, M, Christianson, D.W.
Deposit date:2010-10-10
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.816 Å)
Cite:Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis.
Nature, 469, 2011
3DVL
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BU of 3dvl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M.
Deposit date:2008-07-18
Release date:2009-07-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
To be Published
6HZL
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BU of 6hzl by Molmil
Crystal structure of redox-inhibited phosphoribulokinase from Synechococcus sp. (strain PCC 6301), osmate derivative
Descriptor: OSMIUM ION, Phosphoribulokinase
Authors:Wilson, R.H, Bracher, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2018-10-23
Release date:2019-03-27
Last modified:2019-04-17
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Crystal structure of phosphoribulokinase from Synechococcus sp. strain PCC 6301.
Acta Crystallogr.,Sect.F, 75, 2019
4O8E
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BU of 4o8e by Molmil
Crystal structure of the complex of type I ribosome inactivating protein from Momordica balsamina with uridine triphosphate at 2.0 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, URIDINE 5'-TRIPHOSPHATE, ...
Authors:Pandey, S, Yamini, S, Bhushan, A, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2013-12-27
Release date:2014-01-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of type I ribosome inactivating protein from Momordica balsamina with uridine triphosphate at 2.0 A resolution
To be Published
1JM4
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BU of 1jm4 by Molmil
NMR Structure of P/CAF Bromodomain in Complex with HIV-1 Tat Peptide
Descriptor: HIV-1 Tat Peptide, P300/CBP-associated Factor
Authors:Mujtaba, S, He, Y, Zeng, L, Farooq, A, Carlson, J.E, Ott, M, Verdin, E, Zhou, M.-M.
Deposit date:2001-07-17
Release date:2002-07-17
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural basis of lysine-acetylated HIV-1 Tat recognition by PCAF bromodomain
Mol.Cell, 9, 2002
6T9O
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BU of 6t9o by Molmil
CryoEM structure of human polycystin-2/PKD2 in UDM supplemented with PI(3,5)P2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Wang, Q, Pike, A.C.W, Grieben, M, Baronina, A, Nasrallah, C, Shintre, C, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC)
Deposit date:2019-10-28
Release date:2019-11-20
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Lipid Interactions of a Ciliary Membrane TRP Channel: Simulation and Structural Studies of Polycystin-2.
Structure, 28, 2020
4KH3
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BU of 4kh3 by Molmil
Structure of a bacterial self-associating protein
Descriptor: Antigen 43, MALONATE ION
Authors:Heras, B, Gee, C.L, Schembri, M.A, Totsika, M.
Deposit date:2013-04-30
Release date:2014-01-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The antigen 43 structure reveals a molecular Velcro-like mechanism of autotransporter-mediated bacterial clumping.
Proc.Natl.Acad.Sci.USA, 111, 2014
6TA0
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BU of 6ta0 by Molmil
Human NAMPT in complex with nicotinic acid and phosphoribosyl pyrophosphate
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, GLYCEROL, NICOTINIC ACID, ...
Authors:Houry, D, Raasakka, A, Kursula, P, Ziegler, M.
Deposit date:2019-10-29
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Identification of structural determinants of NAMPT activity and substrate selectivity
To Be Published

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