Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 results

6YO7
DownloadVisualize
BU of 6yo7 by Molmil
Ortho-Carborane di-propyl-sulfonamide in complex with CA IX mimic
Descriptor: Carbonic anhydrase 2, Ortho-Carborane di-propyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-04-14
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Direct Introduction of an Alkylsulfonamido Group on C-sites of Isomeric Dicarba-closo-dodecaboranes: The Influence of Stereochemistry on Inhibitory Activity against the Cancer-Associated Carbonic Anhydrase IX Isoenzyme.
Chemistry, 26, 2020
6YOY
DownloadVisualize
BU of 6yoy by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-025
Descriptor: 14-3-3 protein sigma, 5-methyl-2-nitrophenol, CHLORIDE ION, ...
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-15
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
6YP2
DownloadVisualize
BU of 6yp2 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-011
Descriptor: 1-(4-methylphenyl)imidazole, 14-3-3 protein sigma, CHLORIDE ION, ...
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-15
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
6YNA
DownloadVisualize
BU of 6yna by Molmil
Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with Fasudil (M77, soaked)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Oebbeke, M, Wienen-Schmidt, B, Heine, A, Klebe, G.
Deposit date:2020-04-13
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021
2EI6
DownloadVisualize
BU of 2ei6 by Molmil
FACTOR XA IN COMPLEX WITH THE INHIBITOR (-)-cis-N1-[(5-Chloroindol-2-yl)carbonyl]-N2-[(5-methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridin-2-yl)carbonyl]-1,2-cyclohexanediamine
Descriptor: CALCIUM ION, Coagulation factor X, heavy chain, ...
Authors:Suzuki, M.
Deposit date:2007-03-12
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cycloalkanediamine derivatives as novel blood coagulation factor Xa inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
6YQK
DownloadVisualize
BU of 6yqk by Molmil
Crystal structure of cAMP-dependent Protein Kinase (PKA) in complex with a methylisoquinoline Fasudil-derivative (soaked)
Descriptor: 5-(1,4-diazepan-1-ylsulfonyl)-4-methyl-isoquinoline, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Oebbeke, M, Wienen-Schmidt, B, Heine, A, Klebe, G.
Deposit date:2020-04-17
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Two Methods, One Goal: Structural Differences between Cocrystallization and Crystal Soaking to Discover Ligand Binding Poses.
Chemmedchem, 16, 2021
6XZL
DownloadVisualize
BU of 6xzl by Molmil
Arabidopsis UV-B photoreceptor UVR8 mutant D96N D107N
Descriptor: GLYCEROL, Ultraviolet-B receptor UVR8
Authors:Lau, K, Hothorn, M.
Deposit date:2020-02-04
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A constitutively monomeric UVR8 photoreceptor confers enhanced UV-B photomorphogenesis.
Proc.Natl.Acad.Sci.USA, 118, 2021
4OTD
DownloadVisualize
BU of 4otd by Molmil
Crystal Structure of PRK1 Catalytic Domain
Descriptor: Serine/threonine-protein kinase N1
Authors:Chamberlain, P.P, Delker, S, Pagarigan, B, Mahmoudi, A, Jackson, P, Abbassian, M, Muir, J, Raheja, N, Cathers, B.
Deposit date:2014-02-13
Release date:2014-08-27
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of PRK1 in Complex with the Clinical Compounds Lestaurtinib and Tofacitinib Reveal Ligand Induced Conformational Changes.
Plos One, 9, 2014
6Y2H
DownloadVisualize
BU of 6y2h by Molmil
The crystal structure of human chloride intracellular channel protein 5
Descriptor: Chloride intracellular channel protein 5, THIOCYANATE ION
Authors:Ferofontov, A, Giladi, M, Haitin, Y.
Deposit date:2020-02-16
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:Conserved cysteine dioxidation enhances membrane interaction of human Cl - intracellular channel 5.
Faseb J., 34, 2020
6Y69
DownloadVisualize
BU of 6y69 by Molmil
Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Wieland, M, Wilson, D.N.
Deposit date:2020-02-26
Release date:2020-07-01
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Tetracenomycin X inhibits translation by binding within the ribosomal exit tunnel.
Nat.Chem.Biol., 16, 2020
4OY7
DownloadVisualize
BU of 4oy7 by Molmil
Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper.
Descriptor: CALCIUM ION, COPPER (II) ION, Putative secreted cellulose binding protein
Authors:Forsberg, Z, Mackenzie, A.K, Sorlie, M, Rohr, A.K, Helland, R, Arvai, A.S, Vaaje-Kolstad, G, Eijsink, V.G.H.
Deposit date:2014-02-11
Release date:2014-05-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and functional characterization of a conserved pair of bacterial cellulose-oxidizing lytic polysaccharide monooxygenases.
Proc.Natl.Acad.Sci.USA, 111, 2014
6YD9
DownloadVisualize
BU of 6yd9 by Molmil
Ecoli GyrB24 with inhibitor 16a
Descriptor: 1,2-ETHANEDIOL, DNA gyrase subunit B, N-[6-(3-azanylpropanoylamino)-1,3-benzothiazol-2-yl]-3,4-bis(chloranyl)-5-methyl-1H-pyrrole-2-carboxamide
Authors:Barancokova, M, Skok, Z, Benek, O, Cruz, C.D, Tammela, P, Tomasic, T, Zidar, N, Masic, L.P, Zega, A, Stevenson, C.E.M, Mundy, J, Lawson, D.M, Maxwell, A.M, Kikelj, D, Ilas, J.
Deposit date:2020-03-20
Release date:2020-12-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Exploring the Chemical Space of Benzothiazole-Based DNA Gyrase B Inhibitors.
Acs Med.Chem.Lett., 11, 2020
6YO2
DownloadVisualize
BU of 6yo2 by Molmil
Meta-Carborane propyl-sulfonamide in complex with CA IX mimic
Descriptor: Carbonic anhydrase 2, Meta-Carborane propyl-sulfonamide, ZINC ION
Authors:Kugler, M, Brynda, J, Pospisilova, K, Rezacova, P.
Deposit date:2020-04-14
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Direct Introduction of an Alkylsulfonamido Group on C-sites of Isomeric Dicarba-closo-dodecaboranes: The Influence of Stereochemistry on Inhibitory Activity against the Cancer-Associated Carbonic Anhydrase IX Isoenzyme.
Chemistry, 26, 2020
6YP3
DownloadVisualize
BU of 6yp3 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-028
Descriptor: 1-(4-methylphenyl)-1,2,4-triazole, 14-3-3 protein sigma, CHLORIDE ION, ...
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-15
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
6YP8
DownloadVisualize
BU of 6yp8 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-033
Descriptor: 14-3-3 protein sigma, 3-imidazol-1-ylbenzaldehyde, CHLORIDE ION, ...
Authors:Wolter, M, Ottmann, C.
Deposit date:2020-04-15
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
6YPH
DownloadVisualize
BU of 6yph by Molmil
Crystal Structure of CK2alpha with Compound 2 bound
Descriptor: 4-[(4-naphthalen-2-yl-1,3-thiazol-2-yl)amino]-2-oxidanyl-benzoic acid, Casein kinase II subunit alpha
Authors:Brear, P, Hyvonen, M.
Deposit date:2020-04-16
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Proposed Allosteric Inhibitors Bind to the ATP Site of CK2 alpha.
J.Med.Chem., 63, 2020
6YPN
DownloadVisualize
BU of 6ypn by Molmil
Crystal Structure of CK2alpha with 2 molecules of ADP bound
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, Casein kinase II subunit alpha, ...
Authors:Brear, P, Hyvonen, M.
Deposit date:2020-04-16
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Proposed Allosteric Inhibitors Bind to the ATP Site of CK2 alpha.
J.Med.Chem., 63, 2020
6YPS
DownloadVisualize
BU of 6yps by Molmil
Crystal structure of the cAMP-dependent protein kinase A in complex with 4-hydroxybenzamidine
Descriptor: 4-oxidanylbenzenecarboximidamide, DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2020-04-16
Release date:2020-12-09
Last modified:2020-12-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6Y1W
DownloadVisualize
BU of 6y1w by Molmil
Xcc4156, a flavin-dependent halogenase from Xanthomonas campestris
Descriptor: (2S,3S)-butane-2,3-diol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L(+)-TARTARIC ACID, ...
Authors:Widmann, C, Ismail, M, Sewald, N, Niemann, H.H.
Deposit date:2020-02-14
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of apo flavin-dependent halogenase Xcc4156 hints at a reason for cofactor-soaking difficulties.
Acta Crystallogr D Struct Biol, 76, 2020
6YA0
DownloadVisualize
BU of 6ya0 by Molmil
Crystal structure of TSWV glycoprotein N ectodomain (Trypsin treated)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, AMMONIUM ION, ...
Authors:Dessau, M, Bahat, Y.
Deposit date:2020-03-11
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Crystal structure of tomato spotted wilt virus G N reveals a dimer complex formation and evolutionary link to animal-infecting viruses
Proc.Natl.Acad.Sci.USA, 117, 2020
6YF9
DownloadVisualize
BU of 6yf9 by Molmil
Virus-like particle of bacteriophage AVE002
Descriptor: coat protein
Authors:Rumnieks, J, Kalnins, G, Sisovs, M, Lieknina, I, Tars, K.
Deposit date:2020-03-26
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.196 Å)
Cite:Three-dimensional structure of 22 uncultured ssRNA bacteriophages: Flexibility of the coat protein fold and variations in particle shapes.
Sci Adv, 6, 2020
3SRN
DownloadVisualize
BU of 3srn by Molmil
STRUCTURAL CHANGES THAT ACCOMPANY THE REDUCED CATALYTIC EFFICIENCY OF TWO SEMISYNTHETIC RIBONUCLEASE ANALOGS
Descriptor: RIBONUCLEASE A, SULFATE ION
Authors:deMel, V.S.J, Martin, P.D, Doscher, M.S, Edwards, B.F.P.
Deposit date:1991-05-20
Release date:1994-12-20
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural changes that accompany the reduced catalytic efficiency of two semisynthetic ribonuclease analogs.
J.Biol.Chem., 267, 1992
6Y88
DownloadVisualize
BU of 6y88 by Molmil
IGPS (Indole-3-glycerol phosphate synthase) from Pseudomonas aeruginosa in complex with substrate inhibitor rCdRP
Descriptor: 1-(O-CARBOXY-PHENYLAMINO)-1-DEOXY-D-RIBULOSE-5-PHOSPHATE, CITRIC ACID, GLYCEROL, ...
Authors:Soderholm, A, Selmer, M.
Deposit date:2020-03-03
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.09983444 Å)
Cite:Structure and kinetics of indole-3-glycerol phosphate synthase from Pseudomonas aeruginosa : Decarboxylation is not essential for indole formation.
J.Biol.Chem., 295, 2020
3D73
DownloadVisualize
BU of 3d73 by Molmil
Crystal structure of a pheromone binding protein mutant D35A, from Apis mellifera, at pH 7.0
Descriptor: N-BUTYL-BENZENESULFONAMIDE, Pheromone-binding protein ASP1
Authors:Pesenti, M.E, Spinelli, S, Bezirard, V, Briand, L, Pernollet, J.C, Tegoni, M, Cambillau, C.
Deposit date:2008-05-20
Release date:2009-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Queen bee pheromone binding protein pH-induced domain swapping favors pheromone release
J.Mol.Biol., 390, 2009
6YMA
DownloadVisualize
BU of 6yma by Molmil
MicroED structure of acetazolamide-bound human carbonic anhydrase II
Descriptor: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, DIMETHYL SULFOXIDE, ZINC ION, ...
Authors:Clabbers, M.T.B, Fisher, S.Z, Coincon, M, Zou, X, Xu, H.
Deposit date:2020-04-08
Release date:2020-08-12
Last modified:2024-01-24
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Visualizing drug binding interactions using microcrystal electron diffraction.
Commun Biol, 3, 2020

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon