Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51938 results

2ORO
DownloadVisualize
BU of 2oro by Molmil
Murine inducible nitric oxide synthase oxygenase domain (delta 114) (r)-1-(2-imidazol-1-yl-6-methyl-pyrimidin-4-yl)-pyrrolidine-2-carboxylic acid (2-benzo[1,3]dioxol-5-yl-ethyl)-amide complex
Descriptor: N-[2-(1,3-BENZODIOXOL-5-YL)ETHYL]-1-[2-(1H-IMIDAZOL-1-YL)-6-METHYLPYRIMIDIN-4-YL]-D-PROLINAMIDE, PROTOPORPHYRIN IX CONTAINING FE, SULFITE ION, ...
Authors:Adler, M, Whitlow, M.
Deposit date:2007-02-04
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, Synthesis, and Activity of 2-Imidazol-1-ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors
J.Med.Chem., 50, 2007
2ORS
DownloadVisualize
BU of 2ors by Molmil
Murine Inducible Nitric Oxide Synthase Oxygenase Domain (DELTA 114) 4-(Benzo[1,3]dioxol-5-yloxy)-2-(4-imidazol-1-yl-phenoxy)-6-methyl-pyrimidine Complex
Descriptor: 1,2-ETHANEDIOL, 4-(1,3-BENZODIOXOL-5-YLOXY)-2-[4-(1H-IMIDAZOL-1-YL)PHENOXY]-6-METHYLPYRIMIDINE, Nitric oxide synthase, ...
Authors:Adler, M, Whitlow, M.
Deposit date:2007-02-04
Release date:2007-04-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, Synthesis, and Activity of 2-Imidazol-1-ylpyrimidine Derived Inducible Nitric Oxide Synthase Dimerization Inhibitors
J.Med.Chem., 50, 2007
5JHV
DownloadVisualize
BU of 5jhv by Molmil
Apo form of influenza strain H1N1 polymerase acidic subunit N-terminal region crystallized with polyethylene glycol 8000
Descriptor: MANGANESE (II) ION, Polymerase acidic protein
Authors:Fudo, S, Yamamoto, N, Nukaga, M, Odagiri, T, Tashiro, M, Hoshino, T.
Deposit date:2016-04-21
Release date:2016-05-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.749 Å)
Cite:Influence of Precipitants on Molecular Arrangements and Space Groups of Protein Crystals
Cryst.Growth Des., 17, 2017
7TI4
DownloadVisualize
BU of 7ti4 by Molmil
Adeno-associated Virus Go.1 at 2.9 Angstroms resolution, AAVGo.1 AAV-Go
Descriptor: Capsid protein
Authors:Silveria, M, Large, E.
Deposit date:2022-01-12
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Cross-Species Permissivity: Structure of a Goat Adeno-Associated Virus and Its Complex with the Human Receptor AAVR.
J.Virol., 96, 2022
7TI5
DownloadVisualize
BU of 7ti5 by Molmil
Adeno-associated virus Go.1 in Complex With Its Cellular Receptor AAVR at 2.4 Angstroms Resolution, AAVGo.1 AAVR
Descriptor: Capsid protein, Dyslexia-associated protein KIAA0319-like protein
Authors:Silveria, M, Large, E.
Deposit date:2022-01-12
Release date:2022-11-23
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cross-Species Permissivity: Structure of a Goat Adeno-Associated Virus and Its Complex with the Human Receptor AAVR.
J.Virol., 96, 2022
4MJM
DownloadVisualize
BU of 4mjm by Molmil
Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase, with a Short Internal Deletion of CBS Domain from Bacillus anthracis str. Ames
Descriptor: 1,2-ETHANEDIOL, Inosine-5'-monophosphate dehydrogenase
Authors:Kim, Y, Makowska-Grzyska, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-09-03
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2544 Å)
Cite:Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase, with a Short Internal Deletion of CBS Domain from Bacillus anthracis str. Ames
To be Published, 2013
6QXJ
DownloadVisualize
BU of 6qxj by Molmil
Structure of MBP-Mcl-1 in complex with compound 6a
Descriptor: (2~{R})-2-[[6-ethyl-5-(1~{H}-indol-5-yl)thieno[2,3-d]pyrimidin-4-yl]amino]propanoic acid, Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
Authors:Dokurno, P, Szlavik, Z, Ondi, L, Csekei, M, Paczal, A, Szabo, Z.B, Radics, G, Murray, J, Davidson, J, Chen, I, Davis, B, Hubbard, R.E, Pedder, C, Surgenor, A.E, Smith, J, Robertson, A, LeToumelin-Braizat, G, Cauquil, N, Zarka, M, Demarles, D, Perron-Sierra, F, Geneste, O, Kotschy, A.
Deposit date:2019-03-07
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
J.Med.Chem., 62, 2019
6UND
DownloadVisualize
BU of 6und by Molmil
Pseudomonas fluorescens isocyanide hydratase thioimidate intermediate at 298 K XFEL data
Descriptor: Isonitrile hydratase InhA, N-(4-nitrophenyl)methanimine
Authors:Dasgupta, M, van den Bedem, H, Wilson, M.A.
Deposit date:2019-10-11
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis.
Proc.Natl.Acad.Sci.USA, 116, 2019
6EZ4
DownloadVisualize
BU of 6ez4 by Molmil
NMR structure of the C-terminal domain of the human RPAP3 protein
Descriptor: RNA polymerase II-associated protein 3
Authors:Fabre, P, Chagot, M.E, Bragantini, B, Manival, X, Quinternet, M.
Deposit date:2017-11-14
Release date:2018-04-18
Last modified:2024-01-17
Method:SOLUTION NMR
Cite:The RPAP3-Cterminal domain identifies R2TP-like quaternary chaperones.
Nat Commun, 9, 2018
4I3F
DownloadVisualize
BU of 4i3f by Molmil
Crystal structure of serine hydrolase CCSP0084 from the polyaromatic hydrocarbon (PAH)-degrading bacterium Cycloclasticus zankles
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, SODIUM ION, ...
Authors:Stogios, P.J, Xu, X, Dong, A, Cui, H, Alcaide, M, Tornes, J, Gertler, C, Yakimov, M.M, Golyshin, P.N, Ferrer, M, Savchenko, A.
Deposit date:2012-11-26
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the alpha / beta hydrolase family.
Biochem.J., 454, 2013
4MO1
DownloadVisualize
BU of 4mo1 by Molmil
Crystal structure of antitermination protein Q from bacteriophage lambda. Northeast Structural Genomics Consortium target OR18A.
Descriptor: Antitermination protein Q, BROMIDE ION, CHLORIDE ION, ...
Authors:Vorobiev, S, Su, M, Nickels, B, Seetharaman, J, Sahdev, S, Xiao, R, Kogan, S, Maglaqui, M, Wang, D, Everett, J.K, Acton, T.B, Ebright, R.H, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-09-11
Release date:2013-09-25
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Crystal structure of antitermination protein Q from bacteriophage lambda.
To be Published
5MRM
DownloadVisualize
BU of 5mrm by Molmil
Arabidopsis thaliana IspD in complex with Isoxazole (4)
Descriptor: 2,4-bis(bromanyl)-6-[3-(trifluoromethyl)-1,2-oxazol-5-yl]phenol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, ...
Authors:Schwab, A, Illarionov, B, Frank, A, Kunfermann, A, Seet, M, Bacher, A, Witschel, M, Fischer, M, Groll, M, Diederich, F.
Deposit date:2016-12-23
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of Allosteric Inhibition of the Enzyme IspD by Three Different Classes of Ligands.
ACS Chem. Biol., 12, 2017
3KFO
DownloadVisualize
BU of 3kfo by Molmil
Crystal structure of the C-terminal domain from the nuclear pore complex component NUP133 from Saccharomyces cerevisiae
Descriptor: GLYCEROL, Nucleoporin NUP133
Authors:Sampathkumar, P, Bonanno, J.B, Miller, S, Bain, K, Dickey, M, Gheyi, T, Almo, S.C, Rout, M, Sali, A, Phillips, J, Pieper, U, Fernandez-Martinez, J, Franke, J.D, Atwell, S, Thompson, D.A, Emtage, J.S, Wasserman, S, Sauder, J.M, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-10-27
Release date:2010-01-26
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex.
Proteins, 79, 2011
5MRO
DownloadVisualize
BU of 5mro by Molmil
Arabidopsis thaliana IspD Glu258Ala mutant in complex with Azolopyrimidine (1)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic, ...
Authors:Schwab, A, Illarionov, B, Frank, A, Kunfermann, A, Seet, M, Bacher, A, Witschel, M, Fischer, M, Groll, M, Diederich, F.
Deposit date:2016-12-23
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of Allosteric Inhibition of the Enzyme IspD by Three Different Classes of Ligands.
ACS Chem. Biol., 12, 2017
7CHA
DownloadVisualize
BU of 7cha by Molmil
Cryo-EM structure of P.aeruginosa MlaFEBD with AMPPNP
Descriptor: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, MlaD domain-containing protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Zhou, C, Shi, H, Zhang, M, Huang, Y.
Deposit date:2020-07-05
Release date:2021-05-19
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural Insight into Phospholipid Transport by the MlaFEBD Complex from P. aeruginosa.
J.Mol.Biol., 433, 2021
2QJI
DownloadVisualize
BU of 2qji by Molmil
M. jannaschii ADH synthase complexed with dihydroxyacetone phosphate and glycerol
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Putative aldolase MJ0400
Authors:Ealick, S.E, Morar, M.
Deposit date:2007-07-07
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids.
Biochemistry, 46, 2007
6F4B
DownloadVisualize
BU of 6f4b by Molmil
Crystal structure of Glutathione Transferase Omega 3S from Trametes versicolor in complex with glutathione
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione transferase
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-11-29
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
4I72
DownloadVisualize
BU of 4i72 by Molmil
Crystal structure of the Trypanosoma brucei Inosine-Adenosine-Guanosine nucleoside hydrolase in complex with Immucillin A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,4-PYRROLIDINEDIOL,2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)-2S,3S,4R,5R, CALCIUM ION, ...
Authors:Giannese, F, Degano, M.
Deposit date:2012-11-30
Release date:2013-08-07
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of purine nucleosidase from Trypanosoma brucei bound to isozyme-specific trypanocidals and a novel metalorganic inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
2YR5
DownloadVisualize
BU of 2yr5 by Molmil
Crystal structure of L-phenylalanine oxidase from Psuedomonas sp.P501
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Pro-enzyme of L-phenylalanine oxidase, ...
Authors:Ida, K, Kurabayashi, M, Suguro, M, Hikima, T, Yamamoto, M, Suzuki, H.
Deposit date:2007-04-02
Release date:2008-04-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural basis of proteolytic activation of L-phenylalanine oxidase from Pseudomonas sp. P-501.
J.Biol.Chem., 283, 2008
2QHC
DownloadVisualize
BU of 2qhc by Molmil
The Influence of I47A Mutation on Reduced Susceptibility to the Protease Inhibitor Lopinavir
Descriptor: BETA-MERCAPTOETHANOL, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, PROTEASE RETROPEPSIN
Authors:Brynda, J, Saskova, K.G, Kozisek, M, Lepsik, M, Machala, L, Konvalinka, J.
Deposit date:2007-07-02
Release date:2008-07-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Enzymatic and structural analysis of the I47A mutation contributing to the reduced susceptibility to HIV protease inhibitor lopinavir.
Protein Sci., 17, 2008
6F6A
DownloadVisualize
BU of 6f6a by Molmil
Crystal structure of glutathione transferase Omega 3S from Trametes versicolor in complex with dihydrowogonin from wild-cherry extract
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLUTATHIONE, ...
Authors:Schwartz, M, Favier, F, Didierjean, C.
Deposit date:2017-12-05
Release date:2018-06-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular recognition of wood polyphenols by phase II detoxification enzymes of the white rot Trametes versicolor.
Sci Rep, 8, 2018
6WTG
DownloadVisualize
BU of 6wtg by Molmil
SdeA DUB Domain in complex with Ubiquitin
Descriptor: Ubiquitin, Ubiquitinating/deubiquitinating enzyme SdeA
Authors:Kenny, S, Sheedlo, M, Das, C.
Deposit date:2020-05-02
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Insights into Ubiquitin Product Release in Hydrolysis Catalyzed by the Bacterial Deubiquitinase SdeA.
Biochemistry, 60, 2021
4MU6
DownloadVisualize
BU of 4mu6 by Molmil
Crystal Structure of the N-terminal domain of Effector Protein LegC3 from Legionella pneumophila
Descriptor: Kinectin 1 (Kinesin receptor)
Authors:Yao, D, Cherney, M, Cygler, M.
Deposit date:2013-09-20
Release date:2013-12-11
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.082 Å)
Cite:Structure of the N-terminal domain of the effector protein LegC3 from Legionella pneumophila.
Acta Crystallogr.,Sect.D, 70, 2014
7TND
DownloadVisualize
BU of 7tnd by Molmil
The crystal structure of CYP199A4 bound to 4-phenoxybenzoic acid
Descriptor: 4-phenoxybenzoic acid, CHLORIDE ION, Cytochrome P450, ...
Authors:Podgorski, M, Bell, S.G.
Deposit date:2022-01-20
Release date:2023-01-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.825 Å)
Cite:Enabling Aromatic Hydroxylation in a Cytochrome P450 Monooxygenase Enzyme through Protein Engineering.
Chemistry, 28, 2022
7TNF
DownloadVisualize
BU of 7tnf by Molmil
The crystal structure of F298V CYP199A4 bound to 4-phenylbenzoic acid
Descriptor: CHLORIDE ION, Cytochrome P450, MAGNESIUM ION, ...
Authors:Podgorski, M, Bell, S.G.
Deposit date:2022-01-21
Release date:2023-01-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.539 Å)
Cite:Enabling Aromatic Hydroxylation in a Cytochrome P450 Monooxygenase Enzyme through Protein Engineering.
Chemistry, 28, 2022

225681

数据于2024-10-02公开中

PDB statisticsPDBj update infoContact PDBjnumon