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PDB: 51630 results

8GH7
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BU of 8gh7 by Molmil
142D6 bound to BIR3-XIAP
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, BIR3 inhibitor MAA-CHG-PRO-ZHW, E3 ubiquitin-protein ligase XIAP, ...
Authors:Garza-Granados, A, McGuire, J, Baggio, C, Pellecchia, M, Pegan, S.D.
Deposit date:2023-03-09
Release date:2023-07-05
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization of a Potent and Orally Bioavailable Lys-Covalent Inhibitor of Apoptosis Protein (IAP) Antagonist.
J.Med.Chem., 66, 2023
6HM4
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BU of 6hm4 by Molmil
Crystal structure of Rad4 BRCT1,2 in complex with a Mdb1 phosphopeptide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DNA damage response protein Mdb1, ...
Authors:Day, M, Rappas, M, Oliver, A.W, Pearl, L.H.
Deposit date:2018-09-12
Release date:2018-10-17
Method:X-RAY DIFFRACTION (1.770186 Å)
Cite:BRCT domains of the DNA damage checkpoint proteins TOPBP1/Rad4 display distinct specificities for phosphopeptide ligands.
Elife, 7, 2018
2R77
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BU of 2r77 by Molmil
Crystal structure of phosphatidylethanolamine-binding protein, pfl0955c, from Plasmodium falciparum
Descriptor: Phosphatidylethanolamine-binding protein, putative
Authors:Wernimont, A.K, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Crombette, L, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Artz, J.D, Xiao, T, Structural Genomics Consortium (SGC)
Deposit date:2007-09-07
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of phosphatidylethanolamine-binding protein, pfl0955c, from Plasmodium falciparum.
To be Published
6HMC
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BU of 6hmc by Molmil
STRUCTURE OF PROTEIN KINASE CK2 CATALYTIC SUBUNIT (ISOFORM CK2ALPHA'; CSNK2A2 gene product) IN COMPLEX WITH THE INDENOINDOLE-TYPE INHIBITOR THN27
Descriptor: 1,2-ETHANEDIOL, 5-propan-2-yl-4-prop-2-enoxy-7,8-dihydro-6~{H}-indeno[1,2-b]indole-9,10-dione, Casein kinase II subunit alpha'
Authors:Niefind, K, Lindenblatt, D, Dimper, V, Jose, J, Le Borgne, M.
Deposit date:2018-09-12
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Diacritic Binding of an Indenoindole Inhibitor by CK2 alpha Paralogs Explored by a Reliable Path to Atomic Resolution CK2 alpha ' Structures.
Acs Omega, 4, 2019
8GKH
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BU of 8gkh by Molmil
Structure of the Spizellomyces punctatus Fanzor (SpuFz) in complex with omega RNA and target DNA
Descriptor: DNA (35-MER), DNA (5'-D(P*CP*GP*GP*TP*AP*CP*CP*CP*GP*GP*GP*CP*AP*TP*A)-3'), MAGNESIUM ION, ...
Authors:Xu, P, Saito, M, Zhang, F.
Deposit date:2023-03-19
Release date:2023-07-05
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Fanzor is a eukaryotic programmable RNA-guided endonuclease.
Nature, 620, 2023
6TI7
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BU of 6ti7 by Molmil
Mixing Abeta(1-40) and Abeta(1-42) peptides generates unique amyloid fibrils
Descriptor: Amyloid-beta precursor protein
Authors:Cerofolini, L, Ravera, E, Bologna, S, Wiglenda, T, Boddrich, A, Purfurst, B, Benilova, A, Korsak, M, Gallo, G, Rizzo, D, Gonnelli, L, Fragai, M, De Strooper, B, Wanker, E.E, Luchinat, C.
Deposit date:2019-11-21
Release date:2020-07-22
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Mixing A beta (1-40) and A beta (1-42) peptides generates unique amyloid fibrils.
Chem.Commun.(Camb.), 56, 2020
3LMW
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BU of 3lmw by Molmil
Crystal structure of iota-carrageenase family GH82 from A. fortis in absence of chloride ions
Descriptor: CALCIUM ION, Iota-carrageenase, CgiA, ...
Authors:Rebuffet, E, Barbeyron, T, Jeudy, A, Czjzek, M, Michel, G.
Deposit date:2010-02-01
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of catalytic residues and mechanistic analysis of family GH82 iota-carrageenases
Biochemistry, 49, 2010
5FOG
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BU of 5fog by Molmil
Crystal structure of hte Cryptosporidium muris cytosolic leucyl-tRNA synthetase editing domain complex with a post-transfer editing analogue of norvaline (Nv2AA)
Descriptor: 1,2-ETHANEDIOL, 2'-(L-NORVALYL)AMINO-2'-DEOXYADENOSINE, LEUCYL-TRNA SYNTHETASE, ...
Authors:Palencia, A, Liu, R.J, Lukarska, M, Gut, J, Bougdour, A, Touquet, B, Wang, E.D, Alley, M.R.K, Rosenthal, P.J, Hakimi, M.A, Cusack, S.
Deposit date:2015-11-20
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Cryptosporidium and Toxoplasma Parasites are Inhibited by a Benzoxaborole Targeting Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
6T3V
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BU of 6t3v by Molmil
Psychrophilic aromatic amino acids aminotransferase from Psychrobacter sp. B6 cocrystalized with substrate analog - malic acid
Descriptor: (2S)-2-hydroxybutanedioic acid, Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Rutkiewicz, M, Bujacz, A, Rum, J, Bujacz, G.
Deposit date:2019-10-11
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Evidence of Active Site Adaptability towards Different Sized Substrates of Aromatic Amino Acid Aminotransferase from Psychrobacter Sp. B6.
Materials, 14, 2021
6CWU
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BU of 6cwu by Molmil
Protein Tyrosine Phosphatase 1B F135Y mutant
Descriptor: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
Authors:Hjortness, M, Zwart, P, Sankaran, B, Fox, J.M.
Deposit date:2018-03-31
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Evolutionarily Conserved Allosteric Communication in Protein Tyrosine Phosphatases.
Biochemistry, 57, 2018
6T7P
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BU of 6t7p by Molmil
human plasmakallikrein protease domain in complex with active site directed inhibitor
Descriptor: (2~{S},4~{R})-1-[[(3~{S})-3-azanyl-2,3-dihydro-1-benzofuran-6-yl]carbonyl]-~{N}-(3-chlorophenyl)-4-phenyl-pyrrolidine-2-carboxamide, DIMETHYL SULFOXIDE, GLUTATHIONE, ...
Authors:Renatus, M.
Deposit date:2019-10-22
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.416 Å)
Cite:Structure-Based Design and Preclinical Characterization of Selective and Orally Bioavailable Factor XIa Inhibitors: Demonstrating the Power of an Integrated S1 Protease Family Approach.
J.Med.Chem., 63, 2020
6FDT
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BU of 6fdt by Molmil
NMR structure of the second TPR domain of the human RPAP3 protein in complex with HSP70 peptide SGPTIEEVD
Descriptor: Heat shock 70 kDa protein 1B, RNA polymerase II-associated protein 3
Authors:Quinternet, M, Chagot, M.E, Manival, X.
Deposit date:2017-12-26
Release date:2018-08-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Deep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex.
Structure, 26, 2018
6TJO
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BU of 6tjo by Molmil
Cryo-EM structure of TypeI tau filaments extracted from the brains of individuals with Corticobasal degeneration
Descriptor: Microtubule-associated protein tau
Authors:Zhang, W, Murzin, A.G, Falcon, B, Shi, Y, Goedert, M, Scheres, S.H.W.
Deposit date:2019-11-26
Release date:2020-02-05
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Novel tau filament fold in corticobasal degeneration.
Nature, 580, 2020
2C0J
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BU of 2c0j by Molmil
Crystal structure of the bet3-trs33 heterodimer
Descriptor: PALMITIC ACID, R32611_2, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Authors:Kim, M.-S, Yi, M.-J, Lee, K.-H, Wagner, J, Munger, C, Kim, Y.-G, Whiteway, M, Cygler, M, Oh, B.-H, Sacher, M.
Deposit date:2005-09-03
Release date:2006-02-07
Last modified:2015-01-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical and Crystallographic Studies Reveal a Specific Interaction between Trapp Subunits Trs33P and Bet3P
Traffic, 6, 2005
6FN3
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BU of 6fn3 by Molmil
X-ray structure of animal-like Cryptochrome from Chlamydomonas reinhardtii
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cryptochrome photoreceptor, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Franz, S, Ignatz, E, Wenzel, S, Zielosko, H, Yamamoto, J, Mittag, M, Essen, L.-O.
Deposit date:2018-02-02
Release date:2018-08-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the bifunctional cryptochrome aCRY from Chlamydomonas reinhardtii.
Nucleic Acids Res., 46, 2018
5NCS
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BU of 5ncs by Molmil
Structure of the native serpin-type proteinase inhibitor, miropin.
Descriptor: Serpin
Authors:Goulas, T, Ksiazek, M, Garcia-Ferrer, I, Mizgalska, D, Potempa, J, Gomis-Ruth, X.
Deposit date:2017-03-06
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3 Å)
Cite:A structure-derived snap-trap mechanism of a multispecific serpin from the dysbiotic human oral microbiome.
J. Biol. Chem., 292, 2017
7EUV
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BU of 7euv by Molmil
X-ray structure of high-strength hydrogel-grown FABP3 crystal soaked in 50% DMSO solution containing Flurbiprofen
Descriptor: (2R)-2-(3-fluoro-4-phenyl-phenyl)propanoic acid, Fatty acid-binding protein, heart
Authors:Sugiyama, S, Kakinouchi, K, Hoshina, M, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2021-05-19
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:X-ray structure of the human heart fatty acid-binding protein complexed with Flurbiprofen
To Be Published
6YRF
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BU of 6yrf by Molmil
Vip3Bc1 tetramer
Descriptor: Vegetative insecticidal protein
Authors:Thompson, R.F, Byrne, M.J, Iadanza, M.I, Arribas Perez, M, Maskell, D.P, George, R.M, Hesketh, E.L, Beales, P.A, Zack, M.D, Berry, C.
Deposit date:2020-04-20
Release date:2021-03-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of an insecticidal Bt toxin reveal its mechanism of action on the membrane.
Nat Commun, 12, 2021
2RKF
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BU of 2rkf by Molmil
HIV-1 PR resistant mutant + LPV
Descriptor: GLYCEROL, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, PROTEASE RETROPEPSIN, ...
Authors:Rezacova, P, Brynda, J, Kozisek, M, Saskova, K.G, Konvalinka, J.
Deposit date:2007-10-16
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ninety-nine is not enough: molecular characterization of inhibitor-resistant human immunodeficiency virus type 1 protease mutants with insertions in the flap region
J.Virol., 82, 2008
5NJ2
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BU of 5nj2 by Molmil
Crystal structure of BlaC from Mycobacterium tuberculosis bound to phosphate
Descriptor: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, ACETATE ION, ...
Authors:Tassoni, R, Pannu, N.S, Ubbink, M.
Deposit date:2017-03-27
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Phosphate Promotes the Recovery of Mycobacterium tuberculosis beta-Lactamase from Clavulanic Acid Inhibition.
Biochemistry, 56, 2017
1WIB
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BU of 1wib by Molmil
Solution structure of the N-terminal domain from mouse hypothetical protein BAB22488
Descriptor: 60S ribosomal protein L12
Authors:Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the N-terminal domain from mouse hypothetical protein BAB22488
To be Published
7BDQ
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BU of 7bdq by Molmil
MAPK14 bound with SR300
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase 14, ...
Authors:Schroeder, M, Roehm, S, Joerger, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021
7BE4
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BU of 7be4 by Molmil
Crystal structure of MAP kinase p38 alpha in complex with inhibitor SR159
Descriptor: 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14
Authors:Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021
7BE5
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BU of 7be5 by Molmil
Crystal structure of MAP kinase p38 alpha in complex with inhibitor SR276
Descriptor: 1,2-ETHANEDIOL, 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-methyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14
Authors:Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-12-22
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8000524 Å)
Cite:Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe.
J.Med.Chem., 64, 2021
3LVK
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BU of 3lvk by Molmil
Crystal Structure of E.coli IscS-TusA complex (form 2)
Descriptor: Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE, Sulfurtransferase tusA
Authors:Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2010-02-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.442 Å)
Cite:Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
Plos Biol., 8, 2010

224201

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