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PDB: 51630 results

3CZ9
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BU of 3cz9 by Molmil
Crystal Structure of E18L DJ-1
Descriptor: O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, Protein DJ-1
Authors:Witt, A.C, Lakshminarasimhan, M, Remington, B.C, Hasim, S, Pozharski, E, Wilson, M.A.
Deposit date:2008-04-28
Release date:2008-07-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Cysteine pKa depression by a protonated glutamic acid in human DJ-1.
Biochemistry, 47, 2008
3CFO
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BU of 3cfo by Molmil
Triple Mutant APO structure
Descriptor: DNA polymerase, GUANOSINE, SULFATE ION
Authors:Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H.
Deposit date:2008-03-04
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into base selectivity from the structures of an RB69 DNA Polymerase triple mutant
To be Published
3D1G
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BU of 3d1g by Molmil
Structure of a small molecule inhibitor bound to a DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, [(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid
Authors:Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3D6W
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BU of 3d6w by Molmil
LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, MAGNESIUM ION, ...
Authors:Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-20
Release date:2008-07-15
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystal structure of LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
To be Published
3CEW
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BU of 3cew by Molmil
Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205
Descriptor: Uncharacterized cupin protein, ZINC ION
Authors:Forouhar, F, Chen, Y, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Maglaqui, M, Wang, H, Baran, M.C, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-02-29
Release date:2008-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205.
To be Published
3CRI
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BU of 3cri by Molmil
Crystal structure of human fibroblast growth factor-1 with mutations Glu81Ser, Glu82Asn and Lys101Ala
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Meher, A.K, Honjo, E, Kuroki, R, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2008-04-07
Release date:2009-02-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1.
Acta Crystallogr.,Sect.F, 65, 2009
3CNW
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BU of 3cnw by Molmil
Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
Descriptor: Protein XoxI
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Ciccosanti, C, Mao, L, Xiao, R, Nair, R, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-03-26
Release date:2008-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
To Be Published
7VLZ
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BU of 7vlz by Molmil
Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
Descriptor: CALCIUM ION, Peptide P1, Peptide P2, ...
Authors:Cao, H.Y, Wang, Y, Peng, M, Zhang, Y.Z.
Deposit date:2021-10-05
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
To Be Published
3CSK
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BU of 3csk by Molmil
Structure of DPP III from Saccharomyces cerevisiae
Descriptor: MAGNESIUM ION, Probable dipeptidyl-peptidase 3, ZINC ION
Authors:Baral, P.K, Jajcanin, N, Deller, S, Macheroux, P, Abramic, M, Gruber, K.
Deposit date:2008-04-10
Release date:2008-06-10
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The first structure of dipeptidyl-peptidase III provides insight into the catalytic mechanism and mode of substrate binding.
J.Biol.Chem., 283, 2008
3CRB
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BU of 3crb by Molmil
Crystal structure of the complex of C-lobe of lactoferrin with 2-chromenone at 2.6 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, COUMARIN, ...
Authors:Vikram, G, Mir, R, Sinha, M, Singh, N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2008-04-05
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of C-lobe of lactoferrin with 2-chromenone at 2.6 A resolution
To be Published
3CUG
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BU of 3cug by Molmil
Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine
Descriptor: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside, Exo-beta-1,4-glucanase
Authors:Kuntz, D.A, Saul, M, Rose, D.R.
Deposit date:2008-04-16
Release date:2009-04-21
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides
to be published
3CRH
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BU of 3crh by Molmil
Crystal structure of human fibroblast growth factor-1 with mutations Glu81Ser and Lys101Ala
Descriptor: Heparin-binding growth factor 1, SULFATE ION
Authors:Meher, A.K, Honjo, E, Kuroki, R, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2008-04-07
Release date:2009-02-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1.
Acta Crystallogr.,Sect.F, 65, 2009
7VGA
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BU of 7vga by Molmil
Cryo-EM structure of alphavirus, Getah virus
Descriptor: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2
Authors:Wang, M, Sun, Z.Z, Wang, J.F.
Deposit date:2021-09-15
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Implications for the pathogenicity and antigenicity of alpha viruses revealed by a 3.5 angstrom Cryo-EM structure of Getah virus
To Be Published
3DIK
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BU of 3dik by Molmil
Pseudo-atomic model of the HIV-1 CA hexameric lattice
Descriptor: Capsid protein p24
Authors:Ganser-Pornillos, B.K, Cheng, A, Yeager, M.
Deposit date:2008-06-20
Release date:2008-09-16
Last modified:2024-02-21
Method:ELECTRON CRYSTALLOGRAPHY (9 Å)
Cite:Structure of full-length HIV-1 CA: a model for the mature capsid lattice
Cell(Cambridge,Mass.), 131, 2007
3DQW
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BU of 3dqw by Molmil
c-Src kinase domain Thr338Ile mutant in complex with ATPgS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Proto-oncogene tyrosine-protein kinase Src
Authors:Azam, M, Seeliger, M.A, Gray, N, Kuriyan, J, Daley, G.Q.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.017 Å)
Cite:Activation of tyrosine kinases by mutation of the gatekeeper threonine.
Nat.Struct.Mol.Biol., 15, 2008
3DRM
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BU of 3drm by Molmil
2.2 Angstrom Crystal Structure of Thr114Phe Alpha1-Antitrypsin
Descriptor: Alpha-1-antitrypsin
Authors:Gooptu, B, Nobeli, I, Purkiss, A, Phillips, R.L, Mallya, M, Lomas, D.A, Barrett, T.E.
Deposit date:2008-07-11
Release date:2009-03-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic and cellular characterisation of two mechanisms stabilising the native fold of alpha1-antitrypsin: implications for disease and drug design.
J.Mol.Biol., 387, 2009
3DSM
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BU of 3dsm by Molmil
Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.
Descriptor: CHLORIDE ION, uncharacterized protein BACUNI_02894
Authors:Forouhar, F, Lew, S, Seetharaman, J, Mao, L, Janjua, H, Xiao, R, Foote, E.L, Ciccosanti, C, Maglaqui, M, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-07-13
Release date:2008-09-09
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.
To be Published
3DTK
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BU of 3dtk by Molmil
Crystal structure of the IRRE protein, a central regulator of DNA damage repair in deinococcaceae
Descriptor: CHLORIDE ION, IRRE PROTEIN, ZINC ION
Authors:Vujicic-Zagar, A, Dulermo, R, Le Gorrec, M, Vannier, F, Servant, P, Sommer, S, de Groot, A, Serre, L.
Deposit date:2008-07-15
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Crystal structure of the IrrE protein, a central regulator of DNA damage repair in deinococcaceae
J.Mol.Biol., 386, 2009
7VUL
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BU of 7vul by Molmil
Structure of Klebsiella Phage P560 depolymerase
Descriptor: Non-contractile tail fiber protein, SULFATE ION
Authors:Li, M, Chen, R, Zhang, S, Zhang, W.
Deposit date:2021-11-02
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structure of Klebsiella Phage P560 depolymerase
To Be Published
3E0S
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BU of 3e0s by Molmil
Crystal structure of an uncharacterized protein from Chlorobium tepidum
Descriptor: SULFATE ION, uncharacterized protein
Authors:Bonanno, J.B, Dickey, M, Bain, K.T, Powell, A, Ozyurt, S, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-07-31
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of an uncharacterized protein from Chlorobium tepidum
To be Published
3DWO
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BU of 3dwo by Molmil
Crystal structure of a Pseudomonas aeruginosa FadL homologue
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable outer membrane protein, SULFATE ION
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2008-07-22
Release date:2008-12-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall.
Nature, 458, 2009
3DL7
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BU of 3dl7 by Molmil
Aged Form of Mouse Acetylcholinesterase Inhibited by Tabun- Update
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, CHLORIDE ION, ...
Authors:Carletti, E, Li, H, Li, B, Ekstrom, F, Nicolet, Y, Loiodice, M, Gillon, E, Froment, M.T, Lockridge, O, Schopfer, L.M, Masson, P, Nachon, F.
Deposit date:2008-06-26
Release date:2008-12-02
Last modified:2021-03-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation.
J.Am.Chem.Soc., 130, 2008
3DPU
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BU of 3dpu by Molmil
RocCOR domain tandem of Rab family protein (Roco)
Descriptor: Rab family protein
Authors:Gotthardt, K, Weyand, M, Kortholt, A, Van Haastert, P.J.M, Wittinghofer, A.
Deposit date:2008-07-09
Release date:2008-08-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J., 27, 2008
3DQV
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BU of 3dqv by Molmil
Structural Insights into NEDD8 Activation of Cullin-RING Ligases: Conformational Control of Conjugation
Descriptor: Cullin-5, NEDD8, Rbx1, ...
Authors:Duda, D.M, Borg, L.A, Scott, D.C, Hunt, H.W, Hammel, M, Schulman, B.A.
Deposit date:2008-07-09
Release date:2008-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into NEDD8 activation of cullin-RING ligases: conformational control of conjugation.
Cell(Cambridge,Mass.), 134, 2008
3DTI
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BU of 3dti by Molmil
Crystal structure of the IRRE protein, a central regulator of DNA damage repair in deinococcaceae
Descriptor: IRRE protein, ZINC ION
Authors:Vujicic-Zagar, A, Dulermo, R, Le Gorrec, M, Vannier, F, Servant, P, Sommer, S, De Groot, A, Serre, L.
Deposit date:2008-07-15
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the IrrE protein, a central regulator of DNA damage repair in deinococcaceae
J.Mol.Biol., 386, 2009

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