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PDB: 52161 results

3ZG3
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STEROL 14-ALPHA DEMETHYLASE (CYP51)FROM TRYPANOSOMA CRUZI IN COMPLEX WITH THE PYRIDINE INHIBITOR N-(1-(5-(trifluoromethyl)(pyridin-2-yl)) piperidin-4yl)-N-(4-(trifluoromethyl)phenyl)pyridin-3-amine (EPL- BS967, UDD)
Descriptor: N-[4-(trifluoromethyl)phenyl]-N-[1-[5-(trifluoromethyl)pyridin-2-yl]piperidin-4-yl]pyridin-3-amine, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
Authors:Hargrove, T.Y, Wawrzak, Z, Keenan, M, Chatelain, E, Lepesheva, G.I.
Deposit date:2012-12-14
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Complexes of Trypanosoma Cruzi Sterol 14Alpha-Demethylase (Cyp51) with Two Pyridine-Based Drug Candidates for Chagas Disease: Structural Basis for Pathogen-Selectivity
J.Biol.Chem., 288, 2013
3ZHQ
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Crystal structure of the H747A mutant of the SucA domain of Mycobacterium smegmatis KGD
Descriptor: CALCIUM ION, MAGNESIUM ION, MULTIFUNCTIONAL 2-OXOGLUTARATE METABOLISM ENZYME, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
6U87
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Pseudomonas aeruginosa HasA mutant - Y75H
Descriptor: HasAp, PROTOPORPHYRIN IX CONTAINING FE
Authors:Brimberry, M, Lanzilotta, W, Wilks, A, Dent, A.
Deposit date:2019-09-04
Release date:2020-09-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Axial Heme Coordination by the Tyr-His Motif in the Extracellular Hemophore HasAp Is Critical for the Release of Heme to the HasR Receptor of Pseudomonas aeruginosa .
Biochemistry, 60, 2021
3ZWN
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Crystal structure of Aplysia cyclase complexed with substrate NGD and product cGDPR
Descriptor: 3-(AMINOCARBONYL)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYD ROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- YL]PYRIDINIUM, ADP-RIBOSYL CYCLASE, CYCLIC GUANOSINE DIPHOSPHATE-RIBOSE
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-02
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
J.Mol.Biol., 415, 2012
3ZXG
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lysenin sphingomyelin complex
Descriptor: LYSENIN, SULFATE ION, TRIMETHYL-[2-[[(2S,3S)-2-(OCTADECANOYLAMINO)-3-OXIDANYL-BUTOXY]-OXIDANYL-PHOSPHORYL]OXYETHYL]AZANIUM
Authors:De Colibus, L, Sonnen, A.F.P, Morris, K.J, Siebert, C.A, Abrusci, P, Plitzko, J, Hodnik, V, Leippe, M, Volpi, E, Anderluh, G, Gilbert, R.J.C.
Deposit date:2011-08-10
Release date:2012-09-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structures of Lysenin Reveal a Shared Evolutionary Origin for Pore-Forming Proteins and its Mode of Sphingomyelin Recognition.
Structure, 20, 2012
3ZXT
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Dimeric structure of DAPK-1 catalytic domain in complex with AMPPCP- Mg
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:de Diego, I, Lehmann, F, Wilmanns, M.
Deposit date:2011-08-15
Release date:2012-07-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A Journey Through the Dap Kinase Architecture
To be Published
6U8Q
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CryoEM structure of HIV-1 cleaved synaptic complex (CSC) intasome
Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ...
Authors:Li, M, Chen, X, Craigie, R.
Deposit date:2019-09-05
Release date:2020-02-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies.
J.Mol.Biol., 432, 2020
3ZZH
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Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase in complex with its feed- back inhibitor L-arginine
Descriptor: 1,2-ETHANEDIOL, ACETYLGLUTAMATE KINASE, ARGININE, ...
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
3ZV8
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Crystal structure of 3C protease of Enterovirus 68
Descriptor: 3C PROTEASE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
6UE0
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BU of 6ue0 by Molmil
Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate
Descriptor: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION
Authors:Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P.
Deposit date:2019-09-20
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens.
Febs Lett., 594, 2020
3ZVF
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BU of 3zvf by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 85
Descriptor: 3C PROTEASE, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-seryl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZVS
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BU of 3zvs by Molmil
Crystal structure of Archaemetzincin (AmzA) from Archaeoglobus fulgidus at 1.4 A resolution complexed with malonate
Descriptor: ARCHAEMETZINCIN, MALONATE ION, ZINC ION
Authors:Graef, C, Schacherl, M, Baumann, U.
Deposit date:2011-07-27
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.396 Å)
Cite:Crystal Structures of Archaemetzincin Reveal a Moldable Substrate-Binding Site.
Plos One, 7, 2012
3ZWV
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Crystal structure of ADP-ribosyl cyclase complexed with ara-2'F-ADP- ribose at 2.3 angstrom
Descriptor: ADP-RIBOSYL CYCLASE, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-03
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural studies of intermediates along the cyclization pathway of Aplysia ADP-ribosyl cyclase.
J. Mol. Biol., 415, 2012
7RL8
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BU of 7rl8 by Molmil
Crystal Structure of C79A Mutant of Class D beta-lactamase from Clostridium difficile 630
Descriptor: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SULFATE ION
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Rosas-Lemus, M, Jedrzejczak, R, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-23
Release date:2021-08-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of C79A Mutant of Class D beta-lactamase from Clostridium difficile 630
To Be Published
7RLR
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Crystal Structure of K83A Mutant of Class D beta-lactamase from Clostridium difficile 630
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Beta-lactamase, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Rosas-Lemus, M, Jedrzejczak, R, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-26
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure of K83A Mutant of Class D beta-lactamase from Clostridium difficile 630
To Be Published
3ZXY
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BU of 3zxy by Molmil
Structure of S218A mutant of the protease domain of PatA
Descriptor: SUBTILISIN-LIKE PROTEIN
Authors:Koehnke, J, Zollman, D, Vendome, J, Raab, A, Houssen, W.E, Smith, M.C, Jaspars, M, Naismith, J.H.
Deposit date:2011-08-16
Release date:2012-08-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The Discovery of New Cyanobactins from Cyanothece Pcc 7425 Defines a New Signature for Processing of Patellamides.
Chembiochem, 13, 2012
6TV0
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BU of 6tv0 by Molmil
Serratia spp. cyanase hydratase
Descriptor: Cyanate hydratase, GLYCEROL, OXALIC ACID
Authors:Pederzoli, R, Tarantino, D, Gourlay, L.J, Chaves-Sanjuan, A, Bolognesi, M.
Deposit date:2020-01-08
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Detecting the nature and solving the crystal structure of a contaminant protein from an opportunistic pathogen.
Acta Crystallogr.,Sect.F, 76, 2020
6TUU
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BU of 6tuu by Molmil
Leishmania infantum Rad51 surrogate LiRadA10 in complex with 5,6,7,8-tetrahydro-2-naphthoic acid
Descriptor: 5,6,7,8-tetrahydronaphthalene-2-carboxylic acid, CHLORIDE ION, DNA repair and recombination protein RadA, ...
Authors:Pantelejevs, T, Hyvonen, M.
Deposit date:2020-01-08
Release date:2021-01-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of dedicated crystallographic systems for structure-guided drug discovery
To Be Published
3ZZP
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Circular permutant of ribosomal protein S6, lacking edge strand beta- 2 of wild-type S6.
Descriptor: RIBOSOMAL PROTEIN S6
Authors:Saraboji, K, Haglund, E, Lindberg, M.O, Oliveberg, M, Logan, D.T.
Deposit date:2011-09-02
Release date:2011-11-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Trimming Down a Protein Structure to its Bare Foldons: Spatial Organization of the Cooperative Unit.
J.Biol.Chem., 287, 2012
3ZV9
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3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 74
Descriptor: 3C PROTEASE, ETHYL (4R)-4-[(TERT-BUTOXYCARBONYL)AMINO]-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZWP
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BU of 3zwp by Molmil
Crystal structure of ADP ribosyl cyclase complexed with ara-2'F-ADP- ribose at 2.1 angstrom
Descriptor: ADP-RIBOSYL CYCLASE, GLYCEROL, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
Authors:Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
Deposit date:2011-08-02
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
J.Mol.Biol., 415, 2012
3ZHV
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BU of 3zhv by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, post-decarboxylation intermediate from pyruvate (2-hydroxyethyl-ThDP)
Descriptor: 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[(1S)-1-oxidanylethyl]-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
Deposit date:2012-12-24
Release date:2013-11-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZOW
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BU of 3zow by Molmil
Crystal Structure of Wild Type Nitrosomonas europaea Cytochrome c552
Descriptor: CYTOCHROME C-552, HEME C
Authors:Hersleth, H.-P, Can, M, Krucinska, J, Zoppellaro, G, Andersen, N.H, Karlsen, S, Wedekind, J.E, Andersson, K.K, Bren, K.L.
Deposit date:2013-02-25
Release date:2013-08-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Characterization of Nitrosomonas Europaea Cytochrome C-552 Variants with Marked Differences in Electronic Structure.
Chembiochem, 14, 2013
3ZVA
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BU of 3zva by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 75
Descriptor: 3C PROTEASE, ETHYL (4R)-4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
6U2Z
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Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the complex with the hydrolyzed moxalactam and two copper ions
Descriptor: (2R)-2-[(1R)-1-{[(2R)-2-carboxy-2-(4-hydroxyphenyl)acetyl]amino}-1-methoxy-2-oxoethyl]-5-methylidene-5,6-dihydro-2H-1,3 -oxazine-4-carboxylic acid, 1,2-ETHANEDIOL, COPPER (II) ION, ...
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-21
Release date:2019-09-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal Structure of the metallo-beta-lactamase L1 from Stenotrophomonas maltophilia in the complex with the hydrolyzed moxalactam and two copper ions
To Be Published

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