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PDB: 51964 results

6IEV
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BU of 6iev by Molmil
Crystal structure of a designed protein
Descriptor: Designed protein
Authors:Han, M, Liao, S, Chen, Q, Liu, H.
Deposit date:2018-09-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Selection and analyses of variants of a designed protein suggest importance of hydrophobicity of partially buried sidechains for protein stability at high temperatures.
Protein Sci., 28, 2019
2BIJ
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BU of 2bij by Molmil
Crystal structure of the human protein tyrosine phosphatase PTPN5 (STEP, striatum enriched enriched Phosphatase)
Descriptor: SULFATE ION, TYROSINE-PROTEIN PHOSPHATASE, NON-RECEPTOR TYPE 5
Authors:Barr, A.J, Debreczeni, J.E, Eswaran, J, Smee, C, Burgess, N, Gileadi, O, Sundstrom, M, Arrowsmith, C, Edwards, A, Knapp, S, von Delft, F.
Deposit date:2005-01-21
Release date:2005-03-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures and inhibitor identification for PTPN5, PTPRR and PTPN7: a family of human MAPK-specific protein tyrosine phosphatases.
Biochem. J., 395, 2006
6RL6
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BU of 6rl6 by Molmil
Fragment AZ-024 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, CHLORIDE ION, Cellular tumor antigen p53, ...
Authors:Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Patel, J, Castaldi, P, Ottmann, C.
Deposit date:2019-05-01
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
3P2W
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BU of 3p2w by Molmil
Unliganded form of Polo-like kinase I Polo-box domain
Descriptor: GLYCEROL, SULFATE ION, Serine/threonine-protein kinase PLK1
Authors:Sledz, P, Hyvonen, M, Abell, C.
Deposit date:2010-10-04
Release date:2011-04-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:From crystal packing to molecular recognition: prediction and discovery of a binding site on the surface of polo-like kinase 1
Angew.Chem.Int.Ed.Engl., 50, 2011
4MP4
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BU of 4mp4 by Molmil
Crystal structure of a glutathione transferase family member from Acinetobacter baumannii, Target EFI-501785, apo structure
Descriptor: Glutathione S-transferase, SULFATE ION
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-09-12
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal structure of a glutathione transferase family member from Acinetobacter baumannii, Target EFI-501785, apo structure
To be Published
1HZK
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BU of 1hzk by Molmil
SOLUTION STRUCTURES OF C-1027 APOPROTEIN AND ITS COMPLEX WITH THE AROMATIZED CHROMOPHORE
Descriptor: C-1027 APOPROTEIN
Authors:Tanaka, T, Fukuda-Ishisaka, S, Hirama, M, Otani, T.
Deposit date:2001-01-25
Release date:2001-05-23
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structures of C-1027 apoprotein and its complex with the aromatized chromophore.
J.Mol.Biol., 309, 2001
3P34
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BU of 3p34 by Molmil
Polo-like kinase I Polo-box domain in complex with MQSpTPL phosphopeptide
Descriptor: GLYCEROL, SULFATE ION, Serine/threonine-protein kinase PLK1, ...
Authors:Sledz, P, Hyvonen, M, Abell, C.
Deposit date:2010-10-04
Release date:2011-04-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:From crystal packing to molecular recognition: prediction and discovery of a binding site on the surface of polo-like kinase 1
Angew.Chem.Int.Ed.Engl., 50, 2011
6E5F
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BU of 6e5f by Molmil
Crystal structure of LpqN involved in cell envelope biogenesis of Mycobacterium tuberculosis
Descriptor: Lipid binding protein LpqN, alpha-D-glucopyranosyl 6-O-dodecyl-alpha-D-glucopyranoside
Authors:Rajavel, M, Su, C.C, Yu, E.W.
Deposit date:2018-07-20
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural and functional evidence that lipoprotein LpqN supports cell envelope biogenesis inMycobacterium tuberculosis.
J.Biol.Chem., 294, 2019
6I69
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BU of 6i69 by Molmil
Circular permutant of ribosomal protein S6, adding 5aa to C terminal of P97-3, L10A mutant
Descriptor: 30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2018-11-15
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Exposing the distinctive modular behavior of beta-strands and alpha-helices in folded proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
3P45
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BU of 3p45 by Molmil
Crystal structure of apo-caspase-6 at physiological pH
Descriptor: caspase-6
Authors:Mueller, I, Lamers, M.B.A.C, Ritchie, A.J, Dominguez, C, Munoz, I, Maillard, M, Kiselyov, A.
Deposit date:2010-10-06
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structures of active and inhibitor-bound human Casp6
To be Published
3P5A
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BU of 3p5a by Molmil
Human Carbonic Anhydrase complexed with Sodium morpholinocarbodithioate
Descriptor: Carbonic anhydrase 2, DIMETHYL SULFOXIDE, ZINC ION, ...
Authors:Aggarwal, M, McKenna, R.
Deposit date:2010-10-08
Release date:2011-10-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Dithiocarbamates strongly inhibit carbonic anhydrases and show antiglaucoma action in vivo
J.Med.Chem., 55, 2012
4HT5
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BU of 4ht5 by Molmil
CO2 concentrating mechanism protein P, CcmP form 1
Descriptor: CO2 concentrating mechanism protein P
Authors:Cai, F, Sutter, M, Kerfeld, C.A.
Deposit date:2012-10-31
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:The structure of CcmP, a tandem bacterial microcompartment domain protein from the beta-carboxysome, forms a subcompartment within a microcompartment.
J.Biol.Chem., 288, 2013
6RR2
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BU of 6rr2 by Molmil
Crystal structure of NAD kinase 1 from Listeria monocytogenes in complexe with an adenine derivative
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, 9-[(2~{S})-oxan-2-yl]purin-6-amine, CITRIC ACID, ...
Authors:Gelin, M, Labesse, G.
Deposit date:2019-05-16
Release date:2020-02-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:From Substrate to Fragments to Inhibitor ActiveIn VivoagainstStaphylococcus aureus.
Acs Infect Dis., 6, 2020
1IAS
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BU of 1ias by Molmil
CYTOPLASMIC DOMAIN OF UNPHOSPHORYLATED TYPE I TGF-BETA RECEPTOR CRYSTALLIZED WITHOUT FKBP12
Descriptor: SULFATE ION, TGF-BETA RECEPTOR TYPE I
Authors:Huse, M, Muir, T.W, Chen, Y.-G, Kuriyan, J, Massague, J.
Deposit date:2001-03-23
Release date:2001-10-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The TGF beta receptor activation process: an inhibitor- to substrate-binding switch.
Mol.Cell, 8, 2001
4HUQ
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BU of 4huq by Molmil
Crystal Structure of a transporter
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA 1, Energy-coupling factor transporter ATP-binding protein EcfA 2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Zhang, P, Xu, K, Zhang, M, Zhao, Q, Yu, F.
Deposit date:2012-11-03
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.998 Å)
Cite:Crystal structure of a folate energy-coupling factor transporter from Lactobacillus brevis.
Nature, 497, 2013
3P6Y
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BU of 3p6y by Molmil
CF Im25-CF Im68-UGUAA complex
Descriptor: 5'-R(*UP*GP*UP*AP*A)-3', Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Li, H, Tong, S, Li, X, Shi, H, Gao, Y, Ge, H, Niu, L, Teng, M.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of pre-mRNA recognition by the human cleavage factor Im complex
To be Published
3ORY
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BU of 3ory by Molmil
Crystal structure of Flap endonuclease 1 from hyperthermophilic archaeon Desulfurococcus amylolyticus
Descriptor: PHOSPHATE ION, flap endonuclease 1
Authors:Mase, T, Kubota, K, Miyazono, K, Kawarabayashii, Y, Tanokura, M.
Deposit date:2010-09-08
Release date:2011-02-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of flap endonuclease 1 from the hyperthermophilic archaeon Desulfurococcus amylolyticus
Acta Crystallogr.,Sect.F, 67, 2011
3EEF
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BU of 3eef by Molmil
Crystal structure of N-carbamoylsarcosine amidase from thermoplasma acidophilum
Descriptor: N-carbamoylsarcosine amidase related protein, ZINC ION
Authors:Luo, H.-B, Zheng, H, Chruszcz, M, Zimmerman, M.D, Skarina, T, Egorova, O, Savchenko, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-09-04
Release date:2008-09-16
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure and molecular modeling study of N-carbamoylsarcosine amidase Ta0454 from Thermoplasma acidophilum.
J.Struct.Biol., 169, 2010
4HVM
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BU of 4hvm by Molmil
Crystal structure of tallysomycin biosynthesis protein TlmII
Descriptor: SULFATE ION, TlmII
Authors:Chang, C, Bigelow, L, Bearden, J, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-11-06
Release date:2012-11-21
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (2.704 Å)
Cite:Crystal structure of tallysomycin biosynthesis protein TlmII
To be Published
4MK3
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BU of 4mk3 by Molmil
Crystal structure of a glutathione transferase family member from Cupriavidus metallidurans CH34, target EFI-507362, with bound glutathione sulfinic acid (gso2h)
Descriptor: Glutathione S-transferase, L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE, MAGNESIUM ION, ...
Authors:Toro, R, Bhosle, R, Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Armstrong, R.N, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-09-04
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystal structure of a glutathione transferase family member from Cupriavidus metallidurans CH34, target EFI-507362, with bound glutathione sulfinic acid (gso2h)
To be published
3OS8
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BU of 3os8 by Molmil
Estrogen Receptor
Descriptor: 4-[1-benzyl-7-(trifluoromethyl)-1H-indazol-3-yl]benzene-1,3-diol, Estrogen receptor
Authors:Bruning, J, Parent, A.A, Gil, G, Zhao, M, Nowak, J, Pace, M.C, Smith, C.L, Afonine, P.V, Adams, P.D, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2010-09-08
Release date:2010-11-10
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (2.031 Å)
Cite:Coupling of receptor conformation and ligand orientation determine graded activity.
Nat.Chem.Biol., 6, 2010
4MRM
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BU of 4mrm by Molmil
Crystal structure of the extracellular domain of human GABA(B) receptor bound to the antagonist phaclofen
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid type B receptor subunit 1, ...
Authors:Geng, Y, Bush, M, Mosyak, L, Wang, F, Fan, Q.R.
Deposit date:2013-09-17
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural mechanism of ligand activation in human GABA(B) receptor.
Nature, 504, 2013
3EEY
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BU of 3eey by Molmil
CRYSTAL STRUCTURE OF PUTATIVE RRNA-METHYLASE FROM Clostridium thermocellum
Descriptor: GLYCEROL, Putative rRNA methylase, S-ADENOSYLMETHIONINE, ...
Authors:Patskovsky, Y, Ramagopal, U.A, Toro, R, Rutter, M, Hu, S, Bain, K, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-09-06
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Rrna-Methylase from Clostridium Thermocellum
To be Published
6E6S
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BU of 6e6s by Molmil
1.45 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) R26E/K46Y mutant from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
4HX6
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BU of 4hx6 by Molmil
Streptomyces globisporus C-1027 NADH:FAD oxidoreductase SgcE6
Descriptor: ACETATE ION, Oxidoreductase, SULFATE ION
Authors:Tan, K, Bigelow, L, Clancy, S, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-11-09
Release date:2012-11-28
Last modified:2016-12-07
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus.
Biochemistry, 55, 2016

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