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PDB: 52161 results

5WTG
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BU of 5wtg by Molmil
Crystal structure of the Fab fragment of anti-HAV antibody R10
Descriptor: FAB Heavy chain, FAB Light chain
Authors:Wang, X, Zhu, L, Dang, M, Hu, Z, Gao, Q, Yuan, S, Sun, Y, Zhang, B, Ren, J, Walter, T.S, Wang, J, Fry, E.E, Stuart, D.I, Rao, Z.
Deposit date:2016-12-11
Release date:2017-01-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.907 Å)
Cite:Potent neutralization of hepatitis A virus reveals a receptor mimic mechanism and the receptor recognition site
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WUT
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BU of 5wut by Molmil
Crystal structure of laminarinase from Flavobacterium sp. UMI-01
Descriptor: ULam111
Authors:Qin, H.M, Miyakawa, Y, Nakamura, A, Tanokura, M.
Deposit date:2016-12-21
Release date:2018-01-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of laminarinase from Flavobacterium sp. UMI-01
To Be Published
4MTC
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BU of 4mtc by Molmil
Crystal structure of human C53A DJ-1
Descriptor: 1,2-ETHANEDIOL, Protein DJ-1
Authors:Cendron, L, Girotto, S, Bisaglia, M, Tessari, I, Mammi, S, Zanotti, G, Bubacco, L.
Deposit date:2013-09-19
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:DJ-1 Is a Copper Chaperone Acting on SOD1 Activation.
J.Biol.Chem., 289, 2014
5WXF
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BU of 5wxf by Molmil
Crystal structure of uPA in complex with upain-2-2
Descriptor: SULFATE ION, Urokinase-type plasminogen activator chain B, upain-2-2 peptide
Authors:Jiang, L, Huang, M.
Deposit date:2017-01-07
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Cleavage of peptidic inhibitors by target protease is caused by peptide conformational transition.
Biochim. Biophys. Acta, 1862, 2018
5WXR
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BU of 5wxr by Molmil
Crystal structure of uPA in complex with upain-2-4-W3A
Descriptor: Urokinase-type plasminogen activator chain B, upain-2-4-W3A peptide
Authors:Jiang, L, Huang, M.
Deposit date:2017-01-08
Release date:2018-07-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of uPA in complex with upain-2-4-W3A
To Be Published
5WWI
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BU of 5wwi by Molmil
Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 1)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-24 alpha chain, ...
Authors:Zhao, M, Liu, K, Chai, Y, Qi, J, Liu, J, Gao, G.F.
Deposit date:2017-01-01
Release date:2018-01-17
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 1).
To Be Published
5WXO
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BU of 5wxo by Molmil
Crystal structure of uPA in complex with upain-2-2-W3A
Descriptor: Urokinase-type plasminogen activator chain B, upain-2-2-W3A peptide
Authors:Jiang, L, Huang, M.
Deposit date:2017-01-08
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Cleavage of peptidic inhibitors by target protease is caused by peptide conformational transition.
Biochim. Biophys. Acta, 1862, 2018
8JTN
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BU of 8jtn by Molmil
Tudor domain of TDRD3 in complex with a small molecule
Descriptor: 2-propyl-2-azoniatricyclo[7.3.0.0^{3,7}]dodeca-1(9),2,7-trien-8-amine, Tudor domain-containing protein 3
Authors:Chen, M, Wang, Z, Li, W, Shang, X, Liu, Y.
Deposit date:2023-06-22
Release date:2023-08-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Tudor domain of TDRD3 in complex with a small molecule antagonist.
Biochim Biophys Acta Gene Regul Mech, 1866, 2023
4MR8
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BU of 4mr8 by Molmil
Crystal structure of the extracellular domain of human GABA(B) receptor bound to the antagonist CGP35348
Descriptor: (S)-(3-aminopropyl)(diethoxymethyl)phosphinic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Geng, Y, Bush, M, Mosyak, L, Wang, F, Fan, Q.R.
Deposit date:2013-09-17
Release date:2013-12-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural mechanism of ligand activation in human GABA(B) receptor.
Nature, 504, 2013
5WXS
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BU of 5wxs by Molmil
Crystal structure of uPA in complex with S2444
Descriptor: (2R)-N-[2-[[(2S)-5-carbamimidamido-1-oxidanylidene-pentan-2-yl]amino]-2-oxidanylidene-ethyl]-5-oxidanylidene-1,2-dihydropyrrole-2-carboxamide, Urokinase-type plasminogen activator chain B
Authors:Jiang, L, Huang, M.
Deposit date:2017-01-08
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of uPA in complex with S2444
To Be Published
4MS3
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BU of 4ms3 by Molmil
Crystal structure of the extracellular domain of human GABA(B) receptor bound to the endogenous agonist GABA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, Gamma-aminobutyric acid type B receptor subunit 1, ...
Authors:Geng, Y, Bush, M, Mosyak, L, Wang, F, Fan, Q.R.
Deposit date:2013-09-18
Release date:2013-12-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural mechanism of ligand activation in human GABA(B) receptor.
Nature, 504, 2013
4MY4
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BU of 4my4 by Molmil
Crystal structure of phosphoglycerate mutase from Staphylococcus aureus.
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, MANGANESE (II) ION
Authors:Roychowdhury, A, Kundu, A, Gujar, A, Bose, M, Das, A.K.
Deposit date:2013-09-27
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism
Febs J., 282, 2015
8JW4
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BU of 8jw4 by Molmil
Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 in the apo state without H1 helix
Descriptor: Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-28
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
4MZB
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BU of 4mzb by Molmil
Crystal structure of Grx1 from Plasmodium falciparum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-09-30
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.038 Å)
Cite:Atomic resolution crystal structure of glutaredoxin 1 from Plasmodium falciparum and comparison with other glutaredoxins.
Acta Crystallogr.,Sect.D, 70, 2014
5X0K
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BU of 5x0k by Molmil
Free serine kinase (E30Q mutant) in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Free serine kinase
Authors:Nagata, R, Fujihashi, M, Miki, K.
Deposit date:2017-01-20
Release date:2017-04-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ACS Chem. Biol., 12, 2017
5WXC
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BU of 5wxc by Molmil
Crystal Structure of HLA-A*2402 in complex with avian influenza A(H7N9) virus-derived peptide H7-25 (data set 2)
Descriptor: Beta-2-microglobulin, H7-25-F, HLA class I histocompatibility antigen, ...
Authors:Zhao, M, Liu, K, Chai, Y, Qi, J, Liu, J, Gao, G.F.
Deposit date:2017-01-07
Release date:2018-01-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Heterosubtypic Protections against Human-Infecting Avian Influenza Viruses Correlate to Biased Cross-T-Cell Responses.
Mbio, 9, 2018
5X14
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BU of 5x14 by Molmil
Crystal structure of Bacillus subtilis PadR in complex with ferulic acid
Descriptor: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, GLYCEROL, Transcriptional regulator
Authors:Park, S.C, Kwak, Y.M, Song, W.S, Hong, M, Yoon, S.I.
Deposit date:2017-01-24
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Nucleic Acids Res., 45, 2017
8JWI
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BU of 8jwi by Molmil
Cryo-EM structure of the outward-facing Plasmodium falciparum multidrug resistance protein 1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-29
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JWG
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BU of 8jwg by Molmil
Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 without H1 helix in complex with MFQ
Descriptor: Mefloquine, Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-29
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JVH
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BU of 8jvh by Molmil
Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 in the apo state with H1 helix
Descriptor: Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-28
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JWF
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BU of 8jwf by Molmil
Cryo-EM structure of Plasmodium falciparum multidrug resistance protein 1 with H1 helix in complex with MFQ
Descriptor: Mefloquine, Multidrug resistance protein 1
Authors:Li, M, Si, K.
Deposit date:2023-06-29
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:The structure of Plasmodium falciparum multidrug resistance protein 1 reveals an N-terminal regulatory domain.
Proc.Natl.Acad.Sci.USA, 120, 2023
8K8K
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BU of 8k8k by Molmil
Structure of Klebsiella pneumonia ModA
Descriptor: Molybdate transporter periplasmic protein
Authors:Zhao, Q, Bartlam, M.
Deposit date:2023-07-31
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural analysis of molybdate binding protein ModA from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 681, 2023
8K8L
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BU of 8k8l by Molmil
Structure of Klebsiella pneumonia ModA with molybdate
Descriptor: MOLYBDATE ION, Molybdate transporter periplasmic protein
Authors:Zhao, Q, Bartlam, M.
Deposit date:2023-07-31
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural analysis of molybdate binding protein ModA from Klebsiella pneumoniae.
Biochem.Biophys.Res.Commun., 681, 2023
8K5R
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BU of 8k5r by Molmil
CDK9/cyclin T1 in complex with KB-0742
Descriptor: (1S,3S)-N3-(5-pentan-3-ylpyrazolo[1,5-a]pyrimidin-7-yl)cyclopentane-1,3-diamine, Cyclin-T1, Cyclin-dependent kinase 9
Authors:Zhou, M, Li, H, Gao, H, Trotter, B.W, Freeman, D.
Deposit date:2023-07-24
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.751 Å)
Cite:Discovery of KB-0742, a Potent, Selective, Orally Bioavailable Small Molecule Inhibitor of CDK9 for MYC-Dependent Cancers.
J.Med.Chem., 66, 2023
8JTP
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BU of 8jtp by Molmil
Crystal structure of apo Enoyl-Acyl Carrier Protein Reductase (FabI) from Klebsiella pneumoniae
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], HEXAETHYLENE GLYCOL
Authors:Biswas, S, Kushwaha, G.S, Suar, M.
Deposit date:2023-06-22
Release date:2023-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and Biochemical Studies on Klebsiella Pneumoniae Enoyl-ACP Reductase (FabI) Suggest Flexible Substrate Binding Site.
Protein J., 43, 2024

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