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PDB: 51689 件

6U0H
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Tubulin lattice of the ciliary doublet microtubule from Tetrahymena thermophila
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Ichikawa, M, Khalifa, A.A.Z, Vargas, J, Basu, K, Bui, K.H.
登録日2019-08-14
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Tubulin lattice in cilia is in a stressed form regulated by microtubule inner proteins.
Proc.Natl.Acad.Sci.USA, 116, 2019
6U0U
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Protofilament Ribbon Flagellar Proteins Rib43a-L
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Ichikawa, M, Khalifa, A.A.Z, Vargas, J, Basu, K, Bui, K.H.
登録日2019-08-14
公開日2019-09-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.16 Å)
主引用文献Tubulin lattice in cilia is in a stressed form regulated by microtubule inner proteins.
Proc.Natl.Acad.Sci.USA, 116, 2019
6LQM
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Cryo-EM structure of a pre-60S ribosomal subunit - state C
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
登録日2020-01-14
公開日2020-08-26
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
5HTD
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BU of 5htd by Molmil
Recombinant bovine beta-lactoglobulin variant L1A/I2S with endogenous ligand (sBlgB#1)
分子名称: Beta-lactoglobulin, MYRISTIC ACID
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
登録日2016-01-26
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
5HTE
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Recombinant bovine beta-lactoglobulin variant L1A/I2S (sBlgB#2)
分子名称: Beta-lactoglobulin
著者Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
登録日2016-01-26
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
7ZEV
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Free form of extended Cyp33-RRM
分子名称: Peptidyl-prolyl cis-trans isomerase E
著者Blatter, M, Allain, F, Meylan, C.
登録日2022-03-31
公開日2022-04-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription.
Sci Adv, 9, 2023
7ZEW
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Complex Cyp33-RRM : AAUAAA RNA
分子名称: Peptidyl-prolyl cis-trans isomerase E, RNA (5'-R(*AP*AP*UP*AP*AP*A)-3')
著者Blatter, M, Allain, F, Meylan, C.
登録日2022-03-31
公開日2022-04-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription.
Sci Adv, 9, 2023
7ZEZ
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Trimolecular complex Cyp33-RRMdelta alpha : MLL1-PHD3 : H3K4me3
分子名称: Histone H3, Isoform 3 of Peptidyl-prolyl cis-trans isomerase E, MLL cleavage product N320, ...
著者Blatter, M, Allain, F, Meylan, C.
登録日2022-03-31
公開日2022-04-13
最終更新日2023-05-03
実験手法SOLUTION NMR
主引用文献RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription.
Sci Adv, 9, 2023
7NEL
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ER-PRS*(+) (Y537S) in complex with estradiol and SRC-2 coactivator peptide
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, ESTRADIOL, ...
著者Kriegel, M, Muller, Y.A.
登録日2021-02-04
公開日2021-08-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A PROSS-designed extensively mutated estrogen receptor alpha variant displays enhanced thermal stability while retaining native allosteric regulation and structure.
Sci Rep, 11, 2021
10MH
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BU of 10mh by Molmil
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET
分子名称: DNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*5NCP*GP*CP*AP*TP*GP*G)-3'), PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI), ...
著者Sheikhnejad, G, Brank, A, Christman, J.K, Goddard, A, Alvarez, E, Ford Junior, H, Marquez, V.E, Marasco, C.J, Sufrin, J.R, O'Gara, M, Cheng, X.
登録日1998-08-10
公開日1999-02-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.
J.Mol.Biol., 285, 1999
7NDO
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BU of 7ndo by Molmil
ER-PRS*(-) (L536S, L372R) in complex with raloxifene
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Estrogen receptor, ...
著者Kriegel, M, Muller, Y.A.
登録日2021-02-02
公開日2021-08-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A PROSS-designed extensively mutated estrogen receptor alpha variant displays enhanced thermal stability while retaining native allosteric regulation and structure.
Sci Rep, 11, 2021
7NFB
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BU of 7nfb by Molmil
ER-PRS*(+) (Y537S) in complex with genistein and SRC-2 coactivator peptide
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Estrogen receptor, ...
著者Kriegel, M, Muller, Y.A.
登録日2021-02-05
公開日2021-08-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献A PROSS-designed extensively mutated estrogen receptor alpha variant displays enhanced thermal stability while retaining native allosteric regulation and structure.
Sci Rep, 11, 2021
6IBJ
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BU of 6ibj by Molmil
Copper binding protein from Laetisaria arvalis (LaX325)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity CAZyme, COPPER (II) ION
著者Frandsen, K.E.H, Tandrup, T, Labourel, A, Haon, M, Berrin, J.-G, Lo Leggio, L.
登録日2018-11-30
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A fungal family of lytic polysaccharide monooxygenase-like copper proteins.
Nat.Chem.Biol., 16, 2020
6U3Y
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Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
分子名称: ACETATE ION, Gamma-hemolysin subunit A, Panton-Valentine Leucocidin F, ...
著者Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
登録日2019-08-22
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
1T49
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Allosteric Inhibition of Protein Tyrosine Phosphatase 1B
分子名称: 3-(3,5-DIBROMO-4-HYDROXY-BENZOYL)-2-ETHYL-BENZOFURAN-6-SULFONIC ACID (4-SULFAMOYL-PHENYL)-AMIDE, MAGNESIUM ION, Protein-tyrosine phosphatase, ...
著者Wiesmann, C, Barr, K.J, Kung, J, Zhu, J, Shen, W, Fahr, B.J, Zhong, M, Taylor, L, Randal, M, McDowell, R.S, Hansen, S.K.
登録日2004-04-28
公開日2004-07-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Allosteric inhibition of protein tyrosine phosphatase 1B.
Nat.Struct.Mol.Biol., 11, 2004
3LB9
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BU of 3lb9 by Molmil
Crystal structure of the B. circulans cpA123 circular permutant
分子名称: Endo-1,4-beta-xylanase
著者D'Angelo, I, Reitinger, S, Ludwiczek, M, Strynadka, N, Withers, S.G, Mcintosh, L.P.
登録日2010-01-08
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Circular permutation of Bacillus circulans xylanase: a kinetic and structural study.
Biochemistry, 49, 2010
7ZEX
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BU of 7zex by Molmil
Complex Cyp33-RRMdelta alpha : UAAUGUCG RNA
分子名称: Isoform 3 of Peptidyl-prolyl cis-trans isomerase E, RNA (5'-R(*UP*AP*AP*UP*GP*UP*CP*G)-3')
著者Blatter, M, Allain, F, Meylan, C.
登録日2022-03-31
公開日2022-05-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献RNA binding induces an allosteric switch in Cyp33 to repress MLL1-mediated transcription.
Sci Adv, 9, 2023
6LY9
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BU of 6ly9 by Molmil
The membrane-embedded Vo domain of V/A-ATPase from Thermus thermophilus
分子名称: V-type ATP synthase subunit C, V-type ATP synthase subunit E, V-type ATP synthase subunit I, ...
著者Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2020-02-13
公開日2020-09-09
最終更新日2020-09-30
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
7SJN
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BU of 7sjn by Molmil
HtrA1:Fab15H6.v4 complex
分子名称: Fab15H6.v4 Heavy Chain, Fab15H6.v4 Light Chain, Serine protease HTRA1
著者Gerhardy, S, Green, E, Estevez, A, Arthur, C.P, Ultsch, M, Rohou, A, Kirchhofer, D.
登録日2021-10-18
公開日2022-09-07
最終更新日2022-09-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Allosteric inhibition of HTRA1 activity by a conformational lock mechanism to treat age-related macular degeneration.
Nat Commun, 13, 2022
116D
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BU of 116d by Molmil
CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
分子名称: DNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')
著者Bingman, C.A, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis.
J.Mol.Biol., 227, 1992
117D
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CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')
著者Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG).
Nucleic Acids Res., 20, 1992
6LLW
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Crystal Structure of Fagopyrum esculentum M UGT708C1 complexed with UDP
分子名称: UDP-glycosyltransferase 708C1, URIDINE-5'-DIPHOSPHATE
著者Wang, X, Liu, M.
登録日2019-12-23
公開日2020-08-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.256 Å)
主引用文献Crystal Structures of theC-Glycosyltransferase UGT708C1 from Buckwheat Provide Insights into the Mechanism ofC-Glycosylation.
Plant Cell, 32, 2020
7NI4
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BU of 7ni4 by Molmil
Human ATM kinase domain with bound M4076 inhibitor
分子名称: 8-(1,3-dimethylpyrazol-4-yl)-1-(3-fluoranyl-5-methoxy-pyridin-4-yl)-7-methoxy-3-methyl-imidazo[4,5-c]quinolin-2-one, Serine-protein kinase ATM, ZINC ION
著者Stakyte, K, Rotheneder, M.
登録日2021-02-11
公開日2021-09-01
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis of human ATM kinase inhibition.
Nat.Struct.Mol.Biol., 28, 2021
1WZ1
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BU of 1wz1 by Molmil
Crystal structure of the Fv fragment complexed with dansyl-lysine
分子名称: Ig heavy chain, Ig light chain, N~6~-{[5-(DIMETHYLAMINO)-1-NAPHTHYL]SULFONYL}-L-LYSINE
著者Nakasako, M, Oka, T, Mashumo, M, Takahashi, H, Shimada, I, Yamaguchi, Y, Kato, K, Arata, Y.
登録日2005-02-21
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Conformational dynamics of complementarity-determining region H3 of an anti-dansyl Fv fragment in the presence of its hapten
J.Mol.Biol., 351, 2005
4KE8
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BU of 4ke8 by Molmil
Crystal structure of Monoglyceride lipase from Bacillus sp. H257 in complex with monopalmitoyl glycerol analogue
分子名称: Thermostable monoacylglycerol lipase, tetradecyl hydrogen (R)-(3-azidopropyl)phosphonate
著者Rengachari, S, Aschauer, P, Gruber, K, Dreveny, I, Oberer, M.
登録日2013-04-25
公開日2013-09-18
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Conformational plasticity and ligand binding of bacterial monoacylglycerol lipase.
J.Biol.Chem., 288, 2013

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件を2024-09-04に公開中

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