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PDB: 52230 件

3PQI
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Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
分子名称: FE (III) ION, POTASSIUM ION, gene product 138
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2010-11-26
公開日2012-02-22
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
8DBQ
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E. coli ATP synthase imaged in 10mM MgATP State1 "half-up" Fo classified
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
1GXQ
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Crystal structure of the PhoB effector domain
分子名称: PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB
著者Blanco, A.G, Sola, M, Gomis-Ruth, F.X, Coll, M.
登録日2002-04-08
公開日2002-04-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tandem DNA Recognition by Two-Component Signal Transduction Transcriptional Activator Phob
Structure, 10, 2002
8DBV
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E. coli ATP synthase imaged in 10mM MgATP State3 "down
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
8DBP
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E. coli ATP synthase imaged in 10mM MgATP State1 "half-up
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
8DBS
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E. coli ATP synthase imaged in 10mM MgATP State2 "half-up" Fo classified
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
1H4H
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BU of 1h4h by Molmil
Oligosaccharide-binding to family 11 xylanases: both covalent intermediate and mutant-product complexes display 2,5B conformations at the active-centre
分子名称: XYLANASE, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-xylopyranose
著者Sabini, E, Wilson, K.S, Danielsen, S, Schulein, M, Davies, G.J.
登録日2001-05-11
公開日2002-05-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Catalysis and Specificity in Enzymatic Glycoside Hydrolysis: A 2,5B Conformation for the Glycosyl-Enzyme Intermediate Revealed by the Structure of the Bacillus Agaradhaerens Family 11 Xylanase.
Chem.Biol., 6, 1999
8DBW
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E. coli ATP synthase imaged in 10mM MgATP State3 "down" Fo classified
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
6VHA
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BU of 6vha by Molmil
Singlet Tau Fibril from Corticobasal Degeneration Human Brain Tissue
分子名称: Microtubule-associated protein tau
著者Arakhamia, T, Lee, C.E, Carlomagno, Y, Duong, D.M, Kundinger, S.R, Wang, K, Williams, D, DeTure, M, Dickson, D.W, Cook, C.N, Seyfried, N.T, Petrucelli, L, Fitzpatrick, A.W.P.
登録日2020-01-09
公開日2020-03-04
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Posttranslational Modifications Mediate the Structural Diversity of Tauopathy Strains.
Cell, 180, 2020
8DBU
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E. coli ATP synthase imaged in 10mM MgATP State2 "down" Fo classified
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Stewart, A.G.
登録日2022-06-14
公開日2023-01-25
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
7JJE
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Sarcin-ricin loop with guanosine dithiophosphate residue.
分子名称: RNA (27-MER)
著者Pallan, P.S, Egli, M, Harp, J.M.
登録日2020-07-25
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Incorporating a Thiophosphate Modification into a Common RNA Tetraloop Motif Causes an Unanticipated Stability Boost.
Biochemistry, 59, 2020
6VBU
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Structure of the bovine BBSome complex
分子名称: BBS1 domain-containing protein, Bardet-Biedl syndrome 18 protein, Bardet-Biedl syndrome 2 protein homolog, ...
著者Singh, S.K, Gui, M, Koh, F, Yip, M.C.J, Brown, A.
登録日2019-12-19
公開日2020-01-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure and activation mechanism of the BBSome membrane protein trafficking complex.
Elife, 9, 2020
1ZVF
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The crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from Saccharomyces cerevisiae
分子名称: 3-hydroxyanthranilate 3,4-dioxygenase, NICKEL (II) ION
著者Li, X, Guo, M, Teng, M, Niu, L.
登録日2005-06-02
公開日2006-06-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献The crystal structure of 3-hydroxyanthranilate 3,4-dioxygenase from Saccharomyces cerevisiae
To be published
7JJF
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Sarcin-ricin loop with modified residue.
分子名称: MAGNESIUM ION, RNA/DNA (27-mer)
著者Harp, J.M, Pallan, P.S, Egli, M.
登録日2020-07-25
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Incorporating a Thiophosphate Modification into a Common RNA Tetraloop Motif Causes an Unanticipated Stability Boost.
Biochemistry, 59, 2020
6VE4
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BU of 6ve4 by Molmil
Pentadecameric PilQ from Pseudomonas aeruginosa
分子名称: Fimbrial assembly protein PilQ
著者McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
登録日2019-12-28
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6VGI
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BU of 6vgi by Molmil
Crystal Structures of FLAP bound to MK-866
分子名称: 3-[3-(tert-butylsulfanyl)-1-[(4-chlorophenyl)methyl]-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic acid, 5-lipoxygenase-activating protein, SULFATE ION
著者Ho, J.D, Lee, M.R, Rauch, C.T, Aznavour, K, Park, J.S, Luz, J.G, Antonysamy, S, Condon, B, Maletic, M, Zhang, A, Hickey, M.J, Hughes, N.E, Chandrasekhar, S, Sloan, A.V, Gooding, K, Harvey, A, Yu, X.P, Kahl, S.D, Norman, B.H.
登録日2020-01-08
公開日2020-12-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structure-based, multi-targeted drug discovery approach to eicosanoid inhibition: Dual inhibitors of mPGES-1 and 5-lipoxygenase activating protein (FLAP).
Biochim Biophys Acta Gen Subj, 1865, 2020
6YCA
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BU of 6yca by Molmil
Crystal structure of Eis1 from Mycobacterium abscessus
分子名称: ACETYL COENZYME *A, SULFATE ION, Uncharacterized N-acetyltransferase D2E76_00625
著者Blaise, M, Ung, K.L.
登録日2020-03-18
公開日2020-09-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural analysis of the N-acetyltransferase Eis1 from Mycobacterium abscessus reveals the molecular determinants of its incapacity to modify aminoglycosides.
Proteins, 89, 2021
7JU4
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BU of 7ju4 by Molmil
Radial spoke 2 stalk, IDAc, and N-DRC attached with doublet microtubule
分子名称: 28 kDa inner dynein arm light chain, axonemal, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Gui, M, Ma, M, Sze-Tu, E, Wang, X, Koh, F, Zhong, E, Berger, B, Davis, J, Dutcher, S, Zhang, R, Brown, A.
登録日2020-08-19
公開日2020-12-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of radial spokes and associated complexes important for ciliary motility.
Nat.Struct.Mol.Biol., 28, 2021
8CX2
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BU of 8cx2 by Molmil
Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC dimeric complex in State 2
分子名称: Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
著者Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
登録日2022-05-19
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The structural basis for HIV-1 Vif antagonism of human APOBEC3G.
Nature, 615, 2023
9GKY
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BU of 9gky by Molmil
Crystal Structure of Histone deacetylase (HdaH) from Vibrio cholerae in complex with decanoic acid
分子名称: DECANOIC ACID, Histone deacetylase, IMIDAZOLE, ...
著者Graf, L.G, Schulze, S, Palm, G.J, Lammers, M.
登録日2024-08-26
公開日2024-11-06
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Distribution and diversity of classical deacylases in bacteria
Nature Communications, 2024
2IWH
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BU of 2iwh by Molmil
Structure of yeast Elongation Factor 3 in complex with ADPNP
分子名称: ELONGATION FACTOR 3A, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-06-30
公開日2006-08-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
1GWU
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BU of 1gwu by Molmil
RECOMBINANT HORSERADISH PEROXIDASE C1A ALA140GLY
分子名称: ACETATE ION, CALCIUM ION, PEROXIDASE C1A, ...
著者Henriksen, A, Brissett, N, Gajhede, M.
登録日2002-03-25
公開日2003-03-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Hrpc Heme Crevice Architecture
To be Published
1ZRY
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BU of 1zry by Molmil
NMR structural analysis of apo chicken liver bile acid binding protein
分子名称: Fatty acid-binding protein, liver
著者Ragona, L, Catalano, M, Luppi, M, Cicero, D, Eliseo, T, Foote, J, Fogolari, F, Zetta, L, Molinari, H.
登録日2005-05-23
公開日2006-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Dynamic Studies Suggest that Allosteric Activation Regulates Ligand Binding in Chicken Liver Bile Acid-binding Protein
J.Biol.Chem., 281, 2006
6UYQ
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BU of 6uyq by Molmil
Crystal structure of K45-acetylated SUMO1 in complex with PML-SIM
分子名称: Protein PML, Small ubiquitin-related modifier 1
著者Wahba, H.M, Gagnon, C, Mascle, X.H, Lussier-Price, M, Cappadocia, L, Sakaguchi, K, Omichinski, J.G.
登録日2019-11-14
公開日2019-11-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner.
Structure, 28, 2020
5NYA
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Carbonic Anhydrase II Inhibitor RA13
分子名称: Carbonic anhydrase 2, GLUTARIC ACID, ZINC ION, ...
著者Brynda, J, Rezacova, P, Horejsi, M, Fanfrlik, J.
登録日2017-05-11
公開日2018-01-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Ranking Power of the SQM/COSMO Scoring Function on Carbonic Anhydrase II-Inhibitor Complexes.
Chemphyschem, 19, 2018

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件を2024-11-06に公開中

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