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PDB: 51938 件

8E2J
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Cryo-EM structure of BIRC6/Smac (from local refinement 1)
分子名称: Baculoviral IAP repeat-containing protein 6, Diablo IAP-binding mitochondrial protein
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8E2E
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BU of 8e2e by Molmil
Cryo-EM structure of helical arch of BIRC6 (from local refinement 1)
分子名称: Baculoviral IAP repeat-containing protein 6
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8DY7
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BU of 8dy7 by Molmil
Streptomyces venezuelae RNAP transcription open promoter complex with WhiA and WhiB transcription factors
分子名称: DNA (71-MER), DNA (78-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Lilic, M, Campbell, E.A.
登録日2022-08-03
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural basis of dual activation of cell division by the actinobacterial transcription factors WhiA and WhiB.
Proc.Natl.Acad.Sci.USA, 120, 2023
6FAI
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BU of 6fai by Molmil
Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit
分子名称: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Scaiola, A, Pena, C, Weisser, M, Boehringer, D, Leibundgut, M, Klingauf-Nerurkar, P, Gerhardy, S, Panse, V.G, Ban, N.
登録日2017-12-15
公開日2018-02-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit.
EMBO J., 37, 2018
8E2I
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BU of 8e2i by Molmil
Cryo-EM structure of BIRC6/Smac
分子名称: Baculoviral IAP repeat-containing protein 6, Diablo IAP-binding mitochondrial protein
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
6EU9
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BU of 6eu9 by Molmil
Crystal structure of Platynereis dumerilii RAR ligand-binding domain in complex with all-trans retinoic acid
分子名称: RETINOIC ACID, Retinoic acid receptor
著者Handberg-Thorsager, M, Gutierrez-Mazariegos, J, Arold, S.T, Nadendla, E.K, Bertucci, P.Y, Germain, P, Tomancak, P, Pierzchalski, K, Jones, J.W, Albalat, R, Kane, M.A, Bourguet, W, Laudet, V, Arendt, D, Schubert, M.
登録日2017-10-29
公開日2018-03-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献The ancestral retinoic acid receptor was a low-affinity sensor triggering neuronal differentiation.
Sci Adv, 4, 2018
8E2F
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Cryo-EM structure of N-terminal arm of BIRC6 (from local refinement 2)
分子名称: Baculoviral IAP repeat-containing protein 6
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8E2K
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BU of 8e2k by Molmil
Cryo-EM structure of BIRC6/HtrA2-S306A
分子名称: Baculoviral IAP repeat-containing protein 6, Serine protease HTRA2, mitochondrial
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
5MXB
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BU of 5mxb by Molmil
Crystal structure of yellow lupin LLPR-10.2B protein in complex with melatonin
分子名称: Class 10 plant pathogenesis-related protein, N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide, SODIUM ION, ...
著者Sliwiak, J, Sikorski, M, Jaskolski, M.
登録日2017-01-22
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献PR-10 proteins as potential mediators of melatonin-cytokinin cross-talk in plants: crystallographic studies of LlPR-10.2B isoform from yellow lupine.
FEBS J., 285, 2018
8E2H
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BU of 8e2h by Molmil
Cryo-EM structure of C-terminal arm of BIRC6 (from local refinement 4)
分子名称: Baculoviral IAP repeat-containing protein 6
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8DY9
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BU of 8dy9 by Molmil
Streptomyces venezuelae RNAP unconstrained open promoter complex with WhiA and WhiB transcription factors
分子名称: DNA (38-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lilic, M, Campbell, E.A.
登録日2022-08-03
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural basis of dual activation of cell division by the actinobacterial transcription factors WhiA and WhiB.
Proc.Natl.Acad.Sci.USA, 120, 2023
5MXW
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BU of 5mxw by Molmil
Crystal structure of yellow lupin LLPR-10.2B protein in complex with melatonin and trans-zeatin.
分子名称: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, Class 10 plant pathogenesis-related protein, N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide, ...
著者Sliwiak, J, Sikorski, M, Jaskolski, M.
登録日2017-01-25
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献PR-10 proteins as potential mediators of melatonin-cytokinin cross-talk in plants: crystallographic studies of LlPR-10.2B isoform from yellow lupine.
FEBS J., 285, 2018
4HVP
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BU of 4hvp by Molmil
Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 Angstroms resolution
分子名称: HIV-1 PROTEASE, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
著者Miller, M, Schneider, J, Sathyanarayana, B.K, Toth, M.V, Marshall, G.R, Clawson, L, Selk, L, Kent, S.B.H, Wlodawer, A.
登録日1989-08-08
公開日1990-04-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of complex of synthetic HIV-1 protease with a substrate-based inhibitor at 2.3 A resolution.
Science, 246, 1989
3KAT
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BU of 3kat by Molmil
Crystal Structure of the CARD domain of the human NLRP1 protein, Northeast Structural Genomics Consortium Target HR3486E
分子名称: NACHT, LRR and PYD domains-containing protein 1
著者Forouhar, F, Abashidze, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2009-10-19
公開日2009-10-27
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Northeast Structural Genomics Consortium Target HR3486E
To be Published
5CZ4
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BU of 5cz4 by Molmil
Yeast 20S proteasome at 2.3 A resolution
分子名称: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Huber, E.M, Groll, M.
登録日2015-07-31
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.
Nat Commun, 7, 2016
5D0V
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BU of 5d0v by Molmil
Yeast 20S proteasome beta5-T1C mutant in complex with Carfilzomib
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Huber, E.M, Groll, M.
登録日2015-08-03
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A unified mechanism for proteolysis and autocatalytic activation in the 20S proteasome.
Nat Commun, 7, 2016
8AAN
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BU of 8aan by Molmil
The nucleoprotein complex of Rep protein with iteron containing dsDNA and DUE ssDNA.
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*TP*AP*T)-3'), DNA (5'-D(*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*T)-3'), DNA (5'-D(*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*T)-3'), ...
著者Nowacka, M, Wegrzyn, K.
登録日2022-07-01
公開日2023-09-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation.
Nucleic Acids Res., 51, 2023
6EZN
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BU of 6ezn by Molmil
Cryo-EM structure of the yeast oligosaccharyltransferase (OST) complex
分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wild, R, Kowal, J, Eyring, J, Ngwa, E.M, Aebi, M, Locher, K.P.
登録日2017-11-16
公開日2018-01-17
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for glycan recognition and reaction priming of eukaryotic oligosaccharyltransferase.
Nat Commun, 13, 2022
4I06
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BU of 4i06 by Molmil
Crystal structure of human Arginase-2 complexed with inhibitor 14
分子名称: Arginase-2, mitochondrial, BENZAMIDINE, ...
著者Cousido-Siah, A, Mitschler, A, Ruiz, F.X, Whitehouse, D.L, Golebiowski, A, Ji, M, Zhang, M, Beckett, P, Sheeler, R, Andreoli, M, Conway, B, Mahboubi, K, Schroeter, H, Van Zandt, M.C, Podjarny, A.
登録日2012-11-16
公開日2013-03-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of (R)-2-Amino-6-borono-2-(2-(piperidin-1-yl)ethyl)hexanoic Acid and Congeners As Highly Potent Inhibitors of Human Arginases I and II for Treatment of Myocardial Reperfusion Injury.
J.Med.Chem., 56, 2013
7GRZ
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BU of 7grz by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-22
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, N,N-dimethyl-2-[(naphthalen-2-yl)oxy]acetamide, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
8E51
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Crystal Structure of Iridescent Shark Catfish Cadherin-23 EC1-2 and Protocadherin-15 EC1-2
分子名称: CALCIUM ION, Cadherin-23, POTASSIUM ION, ...
著者Scheib, E, Nisler, C.R, Sotomayor, M.
登録日2022-08-19
公開日2023-03-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.594 Å)
主引用文献Interpreting the Evolutionary Echoes of a Protein Complex Essential for Inner-Ear Mechanosensation.
Mol.Biol.Evol., 40, 2023
7GS3
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BU of 7gs3 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-26
分子名称: (6-phenylpyridin-3-yl)methanamine, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS2
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BU of 7gs2 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-25
分子名称: 3-(pyridin-3-yl)benzoic acid, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS6
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Crystal structure of SARS-CoV-2 main protease in complex with cpd-29
分子名称: (3S)-4,7-dichloro-3-hydroxy-1,3-dihydro-2H-indol-2-one, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS5
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Crystal structure of SARS-CoV-2 main protease in complex with cpd-28
分子名称: (3R)-5-fluoro-3-hydroxy-1,3-dihydro-2H-indol-2-one, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024

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件を2024-10-02に公開中

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