Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51938 件

6XVS
DownloadVisualize
BU of 6xvs by Molmil
Human myelin protein P2 mutant P38G, unliganded
分子名称: GLYCEROL, Myelin P2 protein
著者Ruskamo, S, Lehtimaki, M, Kursula, P.
登録日2020-01-22
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cryo-EM, X-ray diffraction, and atomistic simulations reveal determinants for the formation of a supramolecular myelin-like proteolipid lattice.
J.Biol.Chem., 295, 2020
7W63
DownloadVisualize
BU of 7w63 by Molmil
Crystal structure of minor pilin TcpB from Vibrio cholerae
分子名称: SULFATE ION, Toxin-coregulated pilus biosynthesis protein B
著者Oki, H, Kawahara, K, Iimori, M, Imoto, Y, Maruno, T, Uchiyama, S, Muroga, Y, Yoshida, A, Yoshida, T, Ohkubo, T, Matsuda, S, Iida, T, Nakamura, S.
登録日2021-12-01
公開日2022-11-09
最終更新日2022-11-16
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural basis for the toxin-coregulated pilus-dependent secretion of Vibrio cholerae colonization factor.
Sci Adv, 8, 2022
6XIJ
DownloadVisualize
BU of 6xij by Molmil
Escherichia coli transcription-translation complex A (TTC-A) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-06-20
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (8 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6XDQ
DownloadVisualize
BU of 6xdq by Molmil
Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 30 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-06-11
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
6XLY
DownloadVisualize
BU of 6xly by Molmil
CRYOEM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ZINC METALLOPROTEASE ZMP1 IN OPEN STATE
分子名称: Probable zinc metalloprotease Zmp1, ZINC ION
著者Liang, W.G, Zhao, M, Tang, W.
登録日2020-06-29
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.
Structure, 29, 2021
7UVE
DownloadVisualize
BU of 7uve by Molmil
Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
分子名称: Histone-lysine N-methyltransferase eggless, peptide H3K9me2K14ac
著者Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2022-05-01
公開日2022-08-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
To Be Published
7UW8
DownloadVisualize
BU of 7uw8 by Molmil
Drosophila melanogaster setdb1-tuor domain
分子名称: Histone-lysine N-methyltransferase eggless
著者Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2022-05-03
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Drosophila melanogaster setdb1-tuor domain
To Be Published
6XE0
DownloadVisualize
BU of 6xe0 by Molmil
Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
分子名称: 16s rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Washburn, R, Zuber, P, Sun, M, Hashem, Y, Shen, B, Li, W, Harvey, S, Acosta-Reyes, F.J, Knauer, S.H, Frank, J, Gottesman, M.E.
登録日2020-06-11
公開日2020-07-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (6.8 Å)
主引用文献Escherichia coli NusG Links the Lead Ribosome with the Transcription Elongation Complex.
Iscience, 23, 2020
7UFS
DownloadVisualize
BU of 7ufs by Molmil
Cryo-EM Structure of Bl_Man38B at 3.4 A
分子名称: Alpha-mannosidase, ZINC ION
著者Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
登録日2022-03-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM Structure of Bl_Man38B at 3.4 A
Nat.Chem.Biol., 2022
6X60
DownloadVisualize
BU of 6x60 by Molmil
ClpP2 from Chlamydia trachomatis with resolved handle loop
分子名称: ATP-dependent Clp protease proteolytic subunit 2
著者Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
登録日2020-05-27
公開日2020-06-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献ClpP2 from Chlamydia trachomatis with resolved handle loop
To Be Published
2CXC
DownloadVisualize
BU of 2cxc by Molmil
Crystal structure of archaeal transcription termination factor NusA
分子名称: NusA
著者Shibata, R, Bessho, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA
Biochem.Biophys.Res.Commun., 355, 2007
6XG1
DownloadVisualize
BU of 6xg1 by Molmil
Class C beta-lactamase from Escherichia coli
分子名称: 1,2-ETHANEDIOL, Beta-lactamase
著者Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-06-16
公開日2020-06-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Class C beta-lactamase from Escherichia coli
To Be Published
7UPS
DownloadVisualize
BU of 7ups by Molmil
Structural study of Legionella pneumophila effector DotY (Lpg0294)
分子名称: 1,2-ETHANEDIOL, DotY (Lpg0294)
著者Chung, I.Y.W, Cygler, M.
登録日2022-04-16
公開日2022-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural study of Legionella pneumophila effector DotY (Lpg0294), a component of the Dot/Icm type IV secretion system.
Acta Crystallogr.,Sect.F, 78, 2022
2CFJ
DownloadVisualize
BU of 2cfj by Molmil
Phosphorylation of the Cytoplasmic Tail of Tissue Factor and its Role in Modulating Structure and Binding Affinity
分子名称: TISSUE FACTOR
著者Sen, M, Agrawal, S, Craft, J.W, Ruf, W, Legge, G.B.
登録日2006-02-21
公開日2007-03-20
最終更新日2019-10-02
実験手法SOLUTION NMR
主引用文献Spectroscopic Characterization of Successive Phosphorylation of the Tissue Factor Cytoplasmic Region.
Open Spectrosc.J., 3, 2009
6XEY
DownloadVisualize
BU of 6xey by Molmil
Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4
分子名称: 2-4 Heavy Chain, 2-4 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rapp, M, Shapiro, L, Ho, D.D.
登録日2020-06-14
公開日2020-07-22
最終更新日2021-01-27
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Potent neutralizing antibodies against multiple epitopes on SARS-CoV-2 spike.
Nature, 584, 2020
6XGF
DownloadVisualize
BU of 6xgf by Molmil
Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-06-17
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
7UFT
DownloadVisualize
BU of 7uft by Molmil
Cryo-EM Structure of Bl_Man38C at 2.9 A
分子名称: Alpha-mannosidase, ZINC ION
著者Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
登録日2022-03-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM Structure of Bl_Man38C at 2.9 A
Nat.Chem.Biol., 2022
6XKT
DownloadVisualize
BU of 6xkt by Molmil
R. capsulatus cyt bc1 with both FeS proteins in c position (CIII2 c-c)
分子名称: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
著者Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
登録日2020-06-27
公開日2020-12-30
最終更新日2021-03-03
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
6XG3
DownloadVisualize
BU of 6xg3 by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature
分子名称: CHLORIDE ION, Non-structural protein 3, PHOSPHATE ION, ...
著者Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-06-16
公開日2020-06-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
7UPV
DownloadVisualize
BU of 7upv by Molmil
Structure of maize BZR1-type beta-amylase provides new insights into its noncatalytic adaptation
分子名称: Beta-amylase, GLYCEROL
著者Palayam, M, Sun, F, Shabek, N.
登録日2022-04-18
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structure of maize BZR1-type beta-amylase BAM8 provides new insights into its noncatalytic adaptation.
J.Struct.Biol., 214, 2022
6XU5
DownloadVisualize
BU of 6xu5 by Molmil
Human myelin protein P2 mutant N2D
分子名称: CITRIC ACID, Myelin P2 protein, PALMITIC ACID
著者Ruskamo, S, Lehtimaki, M, Kursula, P.
登録日2020-01-17
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Cryo-EM, X-ray diffraction, and atomistic simulations reveal determinants for the formation of a supramolecular myelin-like proteolipid lattice.
J.Biol.Chem., 295, 2020
6XUP
DownloadVisualize
BU of 6xup by Molmil
Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT
分子名称: 5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3', BETA-MERCAPTOETHANOL, CACODYLATE ION, ...
著者Grazulis, S, Zaremba, M.
登録日2020-01-20
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Archaeoglobus fulgidus Argonaute protein with DNA oligoduplex 5'-pATCGTGGCCACGAT
To be published
7VLZ
DownloadVisualize
BU of 7vlz by Molmil
Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
分子名称: CALCIUM ION, Peptide P1, Peptide P2, ...
著者Cao, H.Y, Wang, Y, Peng, M, Zhang, Y.Z.
登録日2021-10-05
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
To Be Published
6X89
DownloadVisualize
BU of 6x89 by Molmil
Vigna radiata mitochondrial complex I*
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
著者Letts, J.A, Maldonado, M, Padavannil, A, Zhou, L, Guo, F.
登録日2020-06-01
公開日2020-09-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Atomic structure of a mitochondrial complex I intermediate from vascular plants.
Elife, 9, 2020
7VGA
DownloadVisualize
BU of 7vga by Molmil
Cryo-EM structure of alphavirus, Getah virus
分子名称: Capsid protein, Spike glycoprotein E1, Spike glycoprotein E2
著者Wang, M, Sun, Z.Z, Wang, J.F.
登録日2021-09-15
公開日2022-11-02
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Implications for the pathogenicity and antigenicity of alpha viruses revealed by a 3.5 angstrom Cryo-EM structure of Getah virus
To Be Published

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon