Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

1CP7
DownloadVisualize
BU of 1cp7 by Molmil
AMINOPEPTIDASE FROM STREPTOMYCES GRISEUS
分子名称: AMINOPEPTIDASE, CALCIUM ION, ZINC ION
著者Gilboa, R, Greenblatt, H.M, Perach, M, Spungin-Bialik, A, Lessel, U, Schomburg, D, Blumberg, S, Shoham, G.
登録日1999-06-10
公開日2000-05-03
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Interactions of Streptomyces griseus aminopeptidase with a methionine product analogue: a structural study at 1.53 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
5T6K
DownloadVisualize
BU of 5t6k by Molmil
Crystal Structure of TgCDPK1 From Toxoplasma Gondii complexed with GW780159X
分子名称: 4-(3-chlorophenyl)-5-(1,5-naphthyridin-2-yl)-1,3-thiazol-2-amine, Calmodulin-domain protein kinase 1, UNKNOWN ATOM OR ION
著者Jiang, D.Q, Tempel, W, Walker, J.R, El Bakkouri, M, Loppnau, P, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Lovato, D.V, Osman, K.T, Structural Genomics Consortium (SGC)
登録日2016-09-01
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of CDPK1 from toxoplasma gondii complexed with SGC-1-19
to be published
1CPN
DownloadVisualize
BU of 1cpn by Molmil
NATIVE-LIKE IN VIVO FOLDING OF A CIRCULARLY PERMUTED JELLYROLL PROTEIN SHOWN BY CRYSTAL STRUCTURE ANALYSIS
分子名称: CALCIUM ION, CIRCULARLY PERMUTED
著者Hahn, M, Heinemann, U.
登録日1994-03-11
公開日1994-06-22
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Native-like in vivo folding of a circularly permuted jellyroll protein shown by crystal structure analysis.
Proc.Natl.Acad.Sci.USA, 91, 1994
8DY7
DownloadVisualize
BU of 8dy7 by Molmil
Streptomyces venezuelae RNAP transcription open promoter complex with WhiA and WhiB transcription factors
分子名称: DNA (71-MER), DNA (78-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Lilic, M, Campbell, E.A.
登録日2022-08-03
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural basis of dual activation of cell division by the actinobacterial transcription factors WhiA and WhiB.
Proc.Natl.Acad.Sci.USA, 120, 2023
8E2F
DownloadVisualize
BU of 8e2f by Molmil
Cryo-EM structure of N-terminal arm of BIRC6 (from local refinement 2)
分子名称: Baculoviral IAP repeat-containing protein 6
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
5T72
DownloadVisualize
BU of 5t72 by Molmil
Human carboanhydrase F131C_C206S double mutant in complex with 2
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(HYDROXYMERCURY)BENZOIC ACID, 4-[(E)-(4-aminophenyl)diazenyl]benzenesulfonamide, ...
著者DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
登録日2016-09-02
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
5JBY
DownloadVisualize
BU of 5jby by Molmil
Lys27-linked triubiquitin
分子名称: D-ubiquitin, ubiquitin
著者Pan, M, Gao, S, Zheng, Y.
登録日2016-04-14
公開日2016-07-20
最終更新日2022-02-09
実験手法X-RAY DIFFRACTION (1.987 Å)
主引用文献Structure of Lys27-linked triubiquitin
To Be Published
5NWH
DownloadVisualize
BU of 5nwh by Molmil
Potent inhibitors of NUDT5 silence hormone signaling in breast cancer
分子名称: 7-[[5-(3,4-dichlorophenyl)-1,3,4-oxadiazol-2-yl]methyl]-1,3-dimethyl-8-piperazin-1-yl-purine-2,6-dione, ADP-sugar pyrophosphatase
著者Carter, M, Stenmark, P.
登録日2017-05-06
公開日2018-04-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Targeted NUDT5 inhibitors block hormone signaling in breast cancer cells.
Nat Commun, 9, 2018
8E2K
DownloadVisualize
BU of 8e2k by Molmil
Cryo-EM structure of BIRC6/HtrA2-S306A
分子名称: Baculoviral IAP repeat-containing protein 6, Serine protease HTRA2, mitochondrial
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
5T7J
DownloadVisualize
BU of 5t7j by Molmil
X-ray crystal structure of AA13 LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AoAA13, ZINC ION
著者Frandsen, K.E.H, Poulsen, J.-C.N, Tovborg, M, Johansen, K.S, Lo Leggio, L.
登録日2016-09-05
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder.
Acta Crystallogr D Struct Biol, 73, 2017
8E2H
DownloadVisualize
BU of 8e2h by Molmil
Cryo-EM structure of C-terminal arm of BIRC6 (from local refinement 4)
分子名称: Baculoviral IAP repeat-containing protein 6
著者Hunkeler, M, Fischer, E.S.
登録日2022-08-15
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
1CRL
DownloadVisualize
BU of 1crl by Molmil
INSIGHTS INTO INTERFACIAL ACTIVATION FROM AN 'OPEN' STRUCTURE OF CANDIDA RUGOSA LIPASE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE
著者Grochulski, P, Cygler, M.
登録日1993-03-02
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Insights into interfacial activation from an open structure of Candida rugosa lipase.
J.Biol.Chem., 268, 1993
5HBS
DownloadVisualize
BU of 5hbs by Molmil
Crystal structure of human cellular retinol binding protein 1 in complex with all-trans-retinol at 0.89 angstrom.
分子名称: RETINOL, Retinol-binding protein 1
著者Golczak, M, Arne, J.M, Silvaroli, J.A, Kiser, P.D, Banerjee, S.
登録日2016-01-02
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Ligand Binding Induces Conformational Changes in Human Cellular Retinol-binding Protein 1 (CRBP1) Revealed by Atomic Resolution Crystal Structures.
J.Biol.Chem., 291, 2016
1CS7
DownloadVisualize
BU of 1cs7 by Molmil
SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER
分子名称: 5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3', STRONTIUM ION
著者Lewis, F.D, Liu, X, Wu, Y, Miller, S.E, Wasielewski, M.R, Letsinger, R.L, Sanishvili, R, Joachimiak, A, Tereshko, V, Egli, M.
登録日1999-08-17
公開日2001-10-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers
J.Am.Chem.Soc., 121, 1999
5NXH
DownloadVisualize
BU of 5nxh by Molmil
Crystal structure of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34, residues 744-1289 at 2.9 Angstrom resolution
分子名称: GLYCEROL, Long-tail fiber proximal subunit
著者Namura, M, van Raaij, M.J, Kanamaru, S.
登録日2017-05-10
公開日2017-07-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.
Viruses, 9, 2017
8DY9
DownloadVisualize
BU of 8dy9 by Molmil
Streptomyces venezuelae RNAP unconstrained open promoter complex with WhiA and WhiB transcription factors
分子名称: DNA (38-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Lilic, M, Campbell, E.A.
登録日2022-08-03
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural basis of dual activation of cell division by the actinobacterial transcription factors WhiA and WhiB.
Proc.Natl.Acad.Sci.USA, 120, 2023
1CZY
DownloadVisualize
BU of 1czy by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE TRAF DOMAIN OF HUMAN TRAF2 AND AN LMP1 BINDING PEPTIDE
分子名称: LATENT MEMBRANE PROTEIN 1, TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2
著者Ye, H, Park, Y.C, Kreishman, M, Kieff, E, Wu, H.
登録日1999-09-07
公開日2000-03-08
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structural basis for the recognition of diverse receptor sequences by TRAF2.
Mol.Cell, 4, 1999
5J4U
DownloadVisualize
BU of 5j4u by Molmil
Crystal structure of a glutathione S-transferase PtGSTU30 from Populus trichocarpa in complex with GSH
分子名称: GLUTATHIONE, Glutathione transferase family protein
著者Yang, Q, Gu, J, Yang, M, Zeng, Q.
登録日2016-04-01
公開日2017-04-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.249 Å)
主引用文献Functional and Structural Profiles of GST Gene Family from Three Populus Species Revealed the Sequence-function Decoupling of Orthologous Genes
To Be Published
5JEH
DownloadVisualize
BU of 5jeh by Molmil
Human carbonic anhydrase II (L198A) complexed with benzo[d]thiazole-2-sulfonamide
分子名称: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
著者Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
登録日2016-04-18
公開日2017-01-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
6QSB
DownloadVisualize
BU of 6qsb by Molmil
Crystal Structure of Arg470His mutant of Human Prolidase with Mn ions
分子名称: GLYCEROL, MANGANESE (II) ION, Xaa-Pro dipeptidase
著者Wilk, P, Wator, E, Weiss, M.S.
登録日2019-02-20
公開日2020-03-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural analysis of new compound heterozygous variants in PEPD gene identified in a patient with Prolidase Deficiency diagnosed by exome sequencing.
Genet Mol Biol, 44, 2021
5J51
DownloadVisualize
BU of 5j51 by Molmil
Structure of tetrameric jacalin complexed with Gal alpha-(1,4) Gal
分子名称: 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ...
著者Abhinav, K.V, Sharma, K, Surolia, A, Vijayan, M.
登録日2016-04-01
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Effect of linkage on the location of reducing and nonreducing sugars bound to jacalin.
IUBMB Life, 68, 2016
3BH3
DownloadVisualize
BU of 3bh3 by Molmil
Crystal structure of acetoacetate decarboxylase from Chromobacterium violaceum in complex with acetyl acetone Schiff base intermediate
分子名称: Acetoacetate decarboxylase, pentan-2-one
著者Ho, M, Allen, K.N.
登録日2007-11-27
公開日2008-12-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The origin of the electrostatic perturbation in acetoacetate decarboxylase.
Nature, 459, 2009
5TCQ
DownloadVisualize
BU of 5tcq by Molmil
Near-atomic resolution cryo-EM structure of the Salmonella SPI-1 type III secretion injectisome secretin InvG
分子名称: Protein InvG
著者Worrall, L.J, Hong, C, Vuckovic, M, Bergeron, J.R.C, Huang, R.K, Yu, Z, Strynadka, N.C.J.
登録日2016-09-15
公開日2016-12-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body.
Nature, 540, 2016
1D4K
DownloadVisualize
BU of 1d4k by Molmil
HIV-1 PROTEASE COMPLEXED WITH A MACROCYCLIC PEPTIDOMIMETIC INHIBITOR
分子名称: HIV-1 PROTEASE, N-13-[(10S,13S)-9,12-DIOXO-10-(2-BUTYL)-2-OXA-8,11-DIAZABICYCLO [13.2.2] NONADECA-15,17,18-TRIENE] (2R)-BENZYL-(4S)-HYDROXY-5-AMINOPENTANOIC (1R)-HYDROXY-(2S)-INDANEAMIDE, SULFATE ION
著者Tyndall, J.D, Reid, R.C, Tyssen, D.P, Jardine, D.K, Todd, B, Passmore, M, March, D.R, Pattenden, L.K, Alewood, D, Hu, S.H, Alewood, P.F, Birch, C.J, Martin, J.L, Fairlie, D.P.
登録日1999-10-04
公開日2000-10-11
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Synthesis, stability, antiviral activity, and protease-bound structures of substrate-mimicking constrained macrocyclic inhibitors of HIV-1 protease.
J.Med.Chem., 43, 2000
5E2G
DownloadVisualize
BU of 5e2g by Molmil
Crystal Structure of D-alanine Carboxypeptidase AmpC from Burkholderia cenocepacia
分子名称: ACETIC ACID, Beta-lactamase, THIOCYANATE ION
著者Kim, Y, Joachimiak, G, Endres, M, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-10-01
公開日2015-10-14
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal Structure of D-alanine Carboxypeptidase AmpC from Burkholderia cenocepacia
To Be Published

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon