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PDB: 51689 件

6W9C
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The crystal structure of papain-like protease of SARS CoV-2
分子名称: CHLORIDE ION, Non-structural protein 3, ZINC ION
著者Osipiuk, J, Jedrzejczak, R, Tesar, C, Endres, M, Stols, L, Babnigg, G, Kim, Y, Michalska, K, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-03-22
公開日2020-04-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of papain-like protease of SARS CoV-2
to be published
2NZD
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Nucleosome core particle containing 145 bp of DNA
分子名称: DNA (145-MER), Histone H2B, Histone H3, ...
著者Ong, M.S, Richmond, T.J, Davey, C.A.
登録日2006-11-23
公開日2007-04-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献DNA stretching and extreme kinking in the nucleosome core
J.Mol.Biol., 368, 2007
6Q3A
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Apo form of Apolipoprotein N-acyltransferase (Lnt)
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apolipoprotein N-acyltransferase, GLYCEROL
著者Wiseman, B, Hogbom, M.
登録日2018-12-03
公開日2019-12-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Conformational changes in Apolipoprotein N-acyltransferase (Lnt).
Sci Rep, 10, 2020
6Q3K
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Engineered Human HLA_A2 MHC Class I molecule in complex with NV9 peptide
分子名称: ASN-LEU-VAL-PRO-MET-VAL-ALA-THR-VAL, Beta-2-microglobulin, COBALT (II) ION, ...
著者Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
登録日2018-12-04
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Engineered Human HLA_A2MHC Class I molecule in complex with NV9 peptide
Sci Immunol, 2019
6GC9
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Crystal structure of glutathione transferase Xi 1 from Trametes versicolor
分子名称: Glutathione transferase Xi 1 from Trametes versicolor
著者Schwartz, M, Favier, F, Didierjean, C.
登録日2018-04-17
公開日2018-08-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Trametes versicolor glutathione transferase Xi 3, a dual Cys-GST with catalytic specificities of both Xi and Omega classes.
FEBS Lett., 592, 2018
7ZL6
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Azosemide in complex with human Carbonic anhydrase II (hCA II)
分子名称: Azosemide, Carbonic anhydrase 2, ZINC ION
著者Angeli, A, Ferraroni, M.
登録日2022-04-14
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.383 Å)
主引用文献Sulfonamide diuretic azosemide as an efficient carbonic anhydrase inhibitor
J.Mol.Struct., 1268, 2022
7WYJ
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Structure of the complex of lactoperoxidase with nitric oxide catalytic product nitrite at 1.89 A resolution
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Viswanathan, V, Pandey, N, Singh, A.K, Sinha, M, Singh, R.P, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
登録日2022-02-16
公開日2023-01-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural evidence of the conversion of nitric oxide (NO) to nitrite ion (NO2-) by lactoperoxidase (LPO): Structure of the complex of LPO with NO2- at 1.89 angstrom resolution
J.Inorg.Biochem., 247, 2023
1UCT
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Crystal structure of the extracellular fragment of Fc alpha Receptor I (CD89)
分子名称: Immunoglobulin alpha Fc receptor
著者Ding, Y, Xu, G, Yang, M, Zhang, W, Rao, Z.
登録日2003-04-21
公開日2003-07-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Ectodomain of Human Fc{alpha}RI.
J.Biol.Chem., 278, 2003
1UGL
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Solution structure of S8-SP11
分子名称: S-locus pollen protein
著者Mishima, M, Takayama, S, Sasaki, K, Jee, J.G, Kojima, C, Isogai, A, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-16
公開日2003-09-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the Male Determinant Factor for Brassica Self-incompatibility
J.Biol.Chem., 278, 2003
6PTS
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NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state A)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B.
登録日2019-07-16
公開日2020-05-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.
Proc.Natl.Acad.Sci.USA, 117, 2020
7ZL5
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Azosemide in complex with Carbonic Anhydrase I
分子名称: Azosemide, Carbonic anhydrase 1, DIMETHYL SULFOXIDE, ...
著者Angeli, A, Ferraroni, M.
登録日2022-04-14
公開日2023-04-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.479 Å)
主引用文献Sulfonamide diuretic azosemide as an efficient carbonic anhydrase inhibitor
J.Mol.Struct., 1268, 2022
6W1X
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Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex
分子名称: CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, CRISPR-associated protein Csy3, ...
著者Hirschi, M, Santiago-Frangos, A, Wilkinson, R, Golden, S.M, Wiedenheft, B, Lander, G.
登録日2020-03-04
公開日2020-05-13
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献AcrIF9 tethers non-sequence specific dsDNA to the CRISPR RNA-guided surveillance complex.
Nat Commun, 11, 2020
6JQF
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Crystallization analysis of a beta-N-acetylhexosaminidase (Am2136) from Akkermansia muciniphila
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glycoside hydrolase, ...
著者Zhang, M, Chen, X.
登録日2019-03-31
公開日2019-12-11
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical characteristics and crystallographic evidence for substrate-assisted catalysis of a beta-N-acetylhexosaminidase in Akkermansia muciniphila.
Biochem.Biophys.Res.Commun., 517, 2019
6G5A
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Heme-carbene complex in myoglobin H64V/V68A containing an N-methylhistidine as the proximal ligand, 1.48 angstrom resolution
分子名称: ETHYL ACETATE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Tinzl, M, Hayashi, T, Mori, T, Hilvert, D.
登録日2018-03-29
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme
Nat Catal, 1, 2018
7TNG
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Kringle domain of human Receptor Tyrosine Kinase-Like Orphan Receptor 1 (ROR1)
分子名称: Inactive tyrosine-protein kinase transmembrane receptor ROR1
著者Guarino, S.R, Di Bello, A, Palamini, M, Forneris, F.
登録日2022-01-21
公開日2022-05-11
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the kringle domain of human receptor tyrosine kinase-like orphan receptor 1 (hROR1)
Acta Crystallogr.,Sect.F, 78, 2022
7OSB
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BU of 7osb by Molmil
Crystal Structure of a Double Mutant PETase (S238F/W159H) from Ideonella sakaiensis
分子名称: CHLORIDE ION, GLYCEROL, Poly(ethylene terephthalate) hydrolase, ...
著者Shakespeare, T.J, Zahn, M, Allen, M.D, McGeehan, J.E.
登録日2021-06-08
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Comparative Performance of PETase as a Function of Reaction Conditions, Substrate Properties, and Product Accumulation.
ChemSusChem, 15, 2022
5A0F
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Crystal structure of Yersinia Afp18-modified RhoA
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
著者Jank, T, Schimpl, M, van Aalten, D.M.
登録日2015-04-20
公開日2015-07-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Tyrosine glycosylation of Rho by Yersinia toxin impairs blastomere cell behaviour in zebrafish embryos.
Nat Commun, 6, 2015
4LZN
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Crystal structure of human PRS1 D65N mutant
分子名称: Ribose-phosphate pyrophosphokinase 1, SULFATE ION
著者Chen, P, Teng, M, Li, X.
登録日2013-07-31
公開日2015-02-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Crystal and EM Structures of Human Phosphoribosyl Pyrophosphate Synthase I (PRS1) Provide Novel Insights into the Disease-Associated Mutations
Plos One, 10, 2015
7ORW
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Non-structural protein 10 (nsp10) from SARS CoV-2 in complex with fragment VT00265
分子名称: 1H-benzimidazol-4-amine, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Talibov, V.O, Kozielski, F, Sele, C, Lou, J, Dong, D, Wang, Q, Shi, X, Nyblom, M, Rogstam, A, Krojer, T, Knecht, W, Fisher, S.Z.
登録日2021-06-06
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Identification of fragments binding to SARS-CoV-2 nsp10 reveals ligand-binding sites in conserved interfaces between nsp10 and nsp14/nsp16.
Rsc Chem Biol, 3, 2022
6NLI
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1.90 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor (analog 11)
分子名称: 4-{[(2-hydroxyphenyl)methyl]amino}-1H-isoindole-1,3(2H)-dione, FE (II) ION, Ferroxidase, ...
著者Lovell, S, Punchi-Hewage, A, Battaile, K.P, Yao, H, Nammalwar, B, Gnanasekaran, K.K, Bunce, R.A, Reitz, A.B, Rivera, M.
登録日2019-01-08
公開日2019-05-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity.
J.Am.Chem.Soc., 141, 2019
4M0P
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Crystal structure of human PRS1 M115T mutant
分子名称: Ribose-phosphate pyrophosphokinase 1, SULFATE ION
著者Chen, P, Teng, M, Li, X.
登録日2013-08-01
公開日2015-02-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal and EM Structures of Human Phosphoribosyl Pyrophosphate Synthase I (PRS1) Provide Novel Insights into the Disease-Associated Mutations
Plos One, 10, 2015
1C7F
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D95E OXIDIZED FLAVODOXIN MUTANT FROM D. VULGARIS
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者McCarthy, A, Walsh, M, Higgins, T, D'Arcy, D.
登録日2000-02-11
公開日2000-08-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic Investigation of the Role of Aspartate 95 in the Modulation of the Redox Potentials Of Desulfovibrio Vulgaris Flavodoxin
Biochemistry, 41, 2002
7ORU
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Non-structural protein 10 (nsp10) from SARS CoV-2 in complex with fragment VT00221
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Talibov, V.O, Kozielski, F, Sele, C, Lou, J, Dong, D, Wang, Q, Shi, X, Nyblom, M, Rogstam, A, Krojer, T, Knecht, W, Fisher, S.Z.
登録日2021-06-06
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Identification of fragments binding to SARS-CoV-2 nsp10 reveals ligand-binding sites in conserved interfaces between nsp10 and nsp14/nsp16.
Rsc Chem Biol, 3, 2022
7GAT
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SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES
分子名称: DNA (5'-D(*CP*AP*GP*TP*GP*AP*TP*AP*GP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*CP*TP*AP*TP*CP*AP*CP*TP*G)-3'), NITROGEN REGULATORY PROTEIN AREA, ...
著者Clore, G.M, Starich, M, Wikstrom, M, Gronenborn, A.M.
登録日1997-11-07
公開日1998-01-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The solution structure of the Leu22-->Val mutant AREA DNA binding domain complexed with a TGATAG core element defines a role for hydrophobic packing in the determination of specificity.
J.Mol.Biol., 277, 1998
1U08
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Crystal Structure and Reactivity of YbdL from Escherichia coli Identify a Methionine Aminotransferase Function.
分子名称: Hypothetical aminotransferase ybdL, PYRIDOXAL-5'-PHOSPHATE
著者Dolzan, M, Johansson, K, Roig-Zamboni, V, Campanacci, V, Tegoni, M, Schneider, G, Cambillau, C.
登録日2004-07-13
公開日2004-07-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure and reactivity of YbdL from Escherichia coli identify a methionine aminotransferase function
FEBS Lett., 571, 2004

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件を2024-09-04に公開中

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