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PDB: 52161 results

3ZKD
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BU of 3zkd by Molmil
CRYSTAL STRUCTURE OF THE ATPASE REGION OF Mycobacterium tuberculosis GyrB WITH AMPPNP
Descriptor: DNA GYRASE SUBUNIT B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Agrawal, A, Roue, M, Spitzfaden, C, Petrella, S, Aubry, A, Volker, C, Mossakowska, D, Hann, M, Bax, B, Mayer, C.
Deposit date:2013-01-22
Release date:2013-09-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Mycobacterium Tuberculosis DNA Gyrase ATPase Domain Structures Suggest a Dissociative Mechanism that Explains How ATP Hydrolysis is Coupled to Domain Motion.
Biochem.J., 456, 2013
6ZFH
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BU of 6zfh by Molmil
Structure of human galactokinase in complex with galactose and 2'-(benzo[d]oxazol-2-ylamino)-7',8'-dihydro-1'H-spiro[cyclopentane-1,4'-quinazolin]-5'(6'H)-one
Descriptor: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclopentane]-5-one, Galactokinase, beta-D-galactopyranose
Authors:Bezerra, G.A, Mackinnon, S, Zhang, M, Foster, W, Bailey, H, Arrowsmith, C, Edwards, A, Bountra, C, Lai, K, Yue, W.W, Structural Genomics Consortium (SGC)
Deposit date:2020-06-17
Release date:2021-06-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.439 Å)
Cite:Fragment Screening Reveals Starting Points for Rational Design of Galactokinase 1 Inhibitors to Treat Classic Galactosemia.
Acs Chem.Biol., 16, 2021
3BP1
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BU of 3bp1 by Molmil
Crystal structure of putative 7-cyano-7-deazaguanine reductase QueF from Vibrio cholerae O1 biovar eltor
Descriptor: GUANINE, MAGNESIUM ION, NADPH-dependent 7-cyano-7-deazaguanine reductase, ...
Authors:Kim, Y, Zhou, M, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-18
Release date:2008-01-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:High-resolution structure of the nitrile reductase QueF combined with molecular simulations provide insight into enzyme mechanism.
J.Mol.Biol., 404, 2010
2Q3F
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BU of 2q3f by Molmil
X-ray crystal structure of putative human Ras-related GTP binding D in complex with GMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related GTP-binding protein D
Authors:Mulichak, A.M, Rabeh, W.M, Tempel, W, Nedyalkova, L, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Keefe, L.J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-05-30
Release date:2007-06-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human Ras-related GTP-binding D.
To be published
3ZNJ
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BU of 3znj by Molmil
Crystal structure of unliganded ClcF from R.opacus 1CP in crystal form 1.
Descriptor: 1,2-ETHANEDIOL, 5-CHLOROMUCONOLACTONE DEHALOGENASE, CHLORIDE ION
Authors:Roth, C, Groening, J.A.D, Kaschabek, S.R, Schloemann, M, Straeter, N.
Deposit date:2013-02-14
Release date:2013-03-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure and Catalytic Mechanism of Chloromuconolactone Dehalogenase Clcf from Rhodococcus Opacus 1Cp.
Mol.Microbiol., 88, 2013
3BRE
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BU of 3bre by Molmil
Crystal Structure of P.aeruginosa PA3702
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, Probable two-component response regulator
Authors:De, N, Pirruccello, M, Krasteva, P.V, Bae, N, Raghavan, R.V, Sondermann, H.
Deposit date:2007-12-21
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Phosphorylation-independent regulation of the diguanylate cyclase WspR.
Plos Biol., 6, 2008
1QVW
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BU of 1qvw by Molmil
Crystal structure of the S. cerevisiae YDR533c protein
Descriptor: GLYCEROL, YDR533c protein
Authors:Graille, M, Leulliot, N, Quevillon-Cheruel, S, van Tilbeurgh, H.
Deposit date:2003-08-29
Release date:2004-03-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the YDR533c S. cerevisiae protein, a class II member of the Hsp31 family
STRUCTURE, 12, 2004
5ORH
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BU of 5orh by Molmil
The crystal structure of CK2alpha in complex with compound 2
Descriptor: ACETATE ION, Casein kinase II subunit alpha, [3-chloranyl-4-(2-methylphenyl)phenyl]methanamine
Authors:Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2017-08-16
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
2Q63
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BU of 2q63 by Molmil
HIV-1 PR mutant in complex with nelfinavir
Descriptor: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE, PROTEASE RETROPEPSIN
Authors:Rezacova, P, Kozisek, M, Saskova, K, Brynda, J, Konvalinka, J.
Deposit date:2007-06-04
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular analysis of the HIV-1 resistance development: enzymatic activities, crystal structures, and thermodynamics of nelfinavir-resistant HIV protease mutants
J.Mol.Biol., 374, 2007
1HLV
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BU of 1hlv by Molmil
CRYSTAL STRUCTURE OF CENP-B(1-129) COMPLEXED WITH THE CENP-B BOX DNA
Descriptor: CENP-B BOX DNA, MAJOR CENTROMERE AUTOANTIGEN B
Authors:Tanaka, Y, Nureki, O, Kurumizaka, H, Fukai, S, Kawaguchi, S, Ikuta, M, Iwahara, J, Okazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-12-04
Release date:2002-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA.
EMBO J., 20, 2001
3BV9
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BU of 3bv9 by Molmil
Structure of Thrombin Bound to the Inhibitor FM19
Descriptor: FM19 inhibitor, GLYCEROL, IODIDE ION, ...
Authors:Nieman, M.T, Burke, F, Warnock, M, Zhou, Y, Sweigert, J, Chen, A, Ricketts, D, Lucchesi, B.R, Chen, Z, Di Cera, E, Hilfinger, J, Mosberg, H.I, Schmaier, A.H.
Deposit date:2008-01-05
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Thrombostatin FM compounds: direct thrombin inhibitors - mechanism of action in vitro and in vivo.
J.Thromb.Haemost., 6, 2008
2PYM
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BU of 2pym by Molmil
HIV-1 PR mutant in complex with nelfinavir
Descriptor: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE, PROTEASE RETROPEPSIN
Authors:Rezacova, P, Kozisek, M, Saskova, K, Brynda, J, Konvalinka, J.
Deposit date:2007-05-16
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular analysis of the HIV-1 resistance development: enzymatic activities, crystal structures, and thermodynamics of nelfinavir-resistant HIV protease mutants
J.Mol.Biol., 374, 2007
3BWG
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BU of 3bwg by Molmil
The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168
Descriptor: 1,2-ETHANEDIOL, Uncharacterized HTH-type transcriptional regulator yydK
Authors:Tan, K, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-01-09
Release date:2008-01-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:The crystal structure of possible transcriptional regulator YydK from Bacillus subtilis subsp. subtilis str. 168.
To be Published
1QVR
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BU of 1qvr by Molmil
Crystal Structure Analysis of ClpB
Descriptor: ClpB protein, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PLATINUM (II) ION
Authors:Lee, S, Sowa, M.E, Watanabe, Y, Sigler, P.B, Chiu, W, Yoshida, M, Tsai, F.T.F.
Deposit date:2003-08-28
Release date:2003-10-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure of ClpB: A Molecular Chaperone that Rescues Proteins from an Aggregated State
Cell(Cambridge,Mass.), 115, 2003
3BTH
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BU of 3bth by Molmil
THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI
Descriptor: CALCIUM ION, PROTEIN (PANCREATIC TRYPSIN INHIBITOR), PROTEIN (TRYPSIN), ...
Authors:Helland, R, Otlewski, J, Sundheim, O, Dadlez, M, Smalas, A.O.
Deposit date:1999-03-10
Release date:2000-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structures of the complexes between bovine beta-trypsin and ten P1 variants of BPTI.
J.Mol.Biol., 287, 1999
3BTQ
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BU of 3btq by Molmil
THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI
Descriptor: CALCIUM ION, PROTEIN (BOVINE PANCREATIC TRYPSIN INHIBITOR), PROTEIN (TRYPSIN), ...
Authors:Helland, R, Otlewski, J, Sundheim, O, Dadlez, M, Smalas, A.O.
Deposit date:1999-03-10
Release date:2000-03-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structures of the complexes between bovine beta-trypsin and ten P1 variants of BPTI.
J.Mol.Biol., 287, 1999
5OYF
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BU of 5oyf by Molmil
The crystal structure of CK2alpha in complex with compound 31
Descriptor: 2-(1~{H}-benzimidazol-2-yl)-~{N}-[[4-(2-ethylphenyl)-3-methyl-phenyl]methyl]ethanamine, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Iegre, J, Yoshida, M, Mitchell, S, Rossmann, M, Carro, L, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2017-09-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Second-generation CK2 alpha inhibitors targeting the alpha D pocket.
Chem Sci, 9, 2018
2Q2F
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BU of 2q2f by Molmil
Structure of the human Selenoprotein S (VCP-interacting membrane protein)
Descriptor: CHLORIDE ION, GLYCEROL, Selenoprotein S
Authors:Walker, J.R, Paramanathan, R, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2007-05-28
Release date:2007-06-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Human Selenoprotein S (VCP-interacting membrane protein).
To be Published
3C01
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BU of 3c01 by Molmil
Crystal structural of native SpaS C-terminal domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYSTEINE, SULFATE ION, ...
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
1QZH
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BU of 1qzh by Molmil
Crystal structure of Pot1 (protection of telomere)- ssDNA complex
Descriptor: Protection of telomeres protein 1, telomeric single-stranded DNA
Authors:Lei, M, Podell, E.R, Baumann, P, Cech, T.R.
Deposit date:2003-09-16
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA
Nature, 426, 2003
1HMU
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BU of 1hmu by Molmil
ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS
Descriptor: 2-O-methyl-beta-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranose, 4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Huang, W, Boju, L, Tkalec, L, Su, H, Yang, H.O, Gunay, N.S, Linhardt, R.J, Kim, Y.S, Matte, A, Cygler, M.
Deposit date:2000-12-05
Release date:2001-05-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Active site of chondroitin AC lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis.
Biochemistry, 40, 2001
1HO7
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BU of 1ho7 by Molmil
NMR STRUCTURE OF THE POTASSIUM CHANNEL FRAGMENT L45 IN TFE
Descriptor: VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN
Authors:Ohlenschlager, O, Hojo, H, Ramachandran, R, Gorlach, M, Haris, P.I.
Deposit date:2000-12-10
Release date:2002-06-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of the S4-S5 segment of the Shaker potassium channel.
Biophys.J., 82, 2002
2Q64
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BU of 2q64 by Molmil
HIV-1 PR mutant in complex with nelfinavir
Descriptor: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE, PROTEASE RETROPEPSIN
Authors:Rezacova, P, Kozisek, M, Saskova, K, Brynda, J, Konvalinka, J.
Deposit date:2007-06-04
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular analysis of the HIV-1 resistance development: enzymatic activities, crystal structures, and thermodynamics of nelfinavir-resistant HIV protease mutants
J.Mol.Biol., 374, 2007
1HQJ
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BU of 1hqj by Molmil
CRYSTAL STRUCTURE OF A DE NOVO DESIGNED TRIMERIC COILED-COIL PEPTIDE
Descriptor: LEAD (II) ION, SULFATE ION, ZJU-GLU-LEU-GLU-ALA-ARG-ILE-ARG-GLU-LEU-GLU-ALA-ARG-ILE-LYS-NH2
Authors:Burkhard, P, Meier, M, Lustig, A.
Deposit date:2000-12-18
Release date:2001-03-14
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Design of a minimal protein oligomerization domain by a structural approach.
Protein Sci., 9, 2000
6EPA
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BU of 6epa by Molmil
Structure of dNCS-1 bound to the NCS-1/Ric8a protein/protein interaction regulator IGS-1.76
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, FI18190p1, ...
Authors:Sanchez-Barrena, M.J, Daniel, M, Infantes, L.
Deposit date:2017-10-11
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Deciphering the Inhibition of the Neuronal Calcium Sensor 1 and the Guanine Exchange Factor Ric8a with a Small Phenothiazine Molecule for the Rational Generation of Therapeutic Synapse Function Regulators.
J. Med. Chem., 61, 2018

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