Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 results

5OCJ
DownloadVisualize
BU of 5ocj by Molmil
Crystal structure of Ag85C bound to cyclophostin 8beta inhibitor
Descriptor: DIMETHYL SULFOXIDE, Diacylglycerol acyltransferase/mycolyltransferase Ag85C, methoxy-[(3~{R})-3-[(2~{R})-1-methoxy-1,3-bis(oxidanylidene)butan-2-yl]pentadecyl]phosphinic acid
Authors:Viljoen, A, Richard, M, Nguyen, P.C, Spilling, C.D, Canaan, S, Cavalier, J.F, Blaise, M, Kremer, L.
Deposit date:2017-07-03
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cyclipostins and cyclophostin analogs inhibit the antigen 85C from
J. Biol. Chem., 293, 2018
6SBQ
DownloadVisualize
BU of 6sbq by Molmil
The crystal structure of PfA-M1 in complex with 7-amino-4-phenyl-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Descriptor: DI(HYDROXYETHYL)ETHER, M1-family alanyl aminopeptidase, MALONATE ION, ...
Authors:Salomon, E, Schmitt, M, Mouray, E, McEwen, A.G, Torchy, M, Poussin-Courmontagne, P, Alavi, S, Tarnus, C, Cavarelli, J, Florent, I, Albrecht, S.
Deposit date:2019-07-22
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Aminobenzosuberone derivatives as PfA-M1 inhibitors: Molecular recognition and antiplasmodial evaluation.
Bioorg.Chem., 98, 2020
3MHK
DownloadVisualize
BU of 3mhk by Molmil
Human tankyrase 2 - catalytic PARP domain in complex with 2-(2-pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
Descriptor: 2-pyridin-2-yl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-4-ol, GLYCEROL, Tankyrase-2, ...
Authors:Karlberg, T, Schutz, P, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kotenyova, T, Markova, N, Moche, M, Nordlund, P, Nyman, T, Persson, C, Siponen, M.I, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2010-04-08
Release date:2010-05-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Family-wide chemical profiling and structural analysis of PARP and tankyrase inhibitors
Nat.Biotechnol., 30, 2012
5OG1
DownloadVisualize
BU of 5og1 by Molmil
Cryo EM structure of the E. coli disaggregase ClpB (BAP form, DWB mutant), in the ATPgammaS state
Descriptor: Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Deville, C, Carroni, M, Franke, K.B, Topf, M, Bukau, B, Mogk, A, Saibil, H.R.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural pathway of regulated substrate transfer and threading through an Hsp100 disaggregase.
Sci Adv, 3, 2017
1ACD
DownloadVisualize
BU of 1acd by Molmil
V32D/F57H MUTANT OF MURINE ADIPOCYTE LIPID BINDING PROTEIN
Descriptor: ADIPOCYTE LIPID BINDING PROTEIN
Authors:Ory, J, Kane, C.D, Simpson, M, Banaszak, L.J, Bernlohr, D.A.
Deposit date:1997-02-06
Release date:1997-06-16
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biochemical and crystallographic analyses of a portal mutant of the adipocyte lipid-binding protein.
J.Biol.Chem., 272, 1997
5GHK
DownloadVisualize
BU of 5ghk by Molmil
Crystal Structure Analysis of Canine serum albumin
Descriptor: Serum albumin
Authors:Kihira, K, Yamada, K, Kureishi, M, Yokomaku, K, Shinohara, R, Akiyama, M, Komatsu, T.
Deposit date:2016-06-20
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Artificial Blood for Dogs
Sci Rep, 6, 2016
3MNO
DownloadVisualize
BU of 3mno by Molmil
Crystal structure of the agonist form of mouse glucocorticoid receptor stabilized by (A611V, F608S) mutations at 1.55A
Descriptor: DEXAMETHASONE, GLYCEROL, Glucocorticoid receptor, ...
Authors:Schoch, G.A, Seitz, T, Benz, J, Banner, D, Stihle, M, D'Arcy, B, Thoma, R, Sterner, R, Hennig, M, Ruf, A.
Deposit date:2010-04-22
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Enhancing the stability and solubility of the glucocorticoid receptor ligand-binding domain by high-throughput library screening.
J.Mol.Biol., 403, 2010
3MPR
DownloadVisualize
BU of 3mpr by Molmil
Crystal Structure of endonuclease/exonuclease/phosphatase family protein from Bacteroides thetaiotaomicron, Northeast Structural Genomics Consortium Target BtR318A
Descriptor: ACETIC ACID, BROMIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Kuzin, A, Su, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-04-27
Release date:2010-05-26
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Northeast Structural Genomics Consortium Target BtR318A
To be Published
3MRQ
DownloadVisualize
BU of 3mrq by Molmil
Crystal Structure of MHC class I HLA-A2 molecule complexed with Melan-A MART1 decapeptide variant
Descriptor: 10-meric peptide from Melanoma antigen recognized by T-cells 1, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Reiser, J.-B, Le Gorrec, M, Chouquet, A, Debeaupuis, E, Echasserieau, K, Saulquin, X, Bonneville, M, Housset, D.
Deposit date:2010-04-29
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of MHC class I HLA-A2 molecule complexed with Melan-A MART1 decapeptide variant
To be Published
1J3F
DownloadVisualize
BU of 1j3f by Molmil
Crystal Structure of an Artificial Metalloprotein:Cr(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin
Descriptor: 'N,N'-BIS-(2-HYDROXY-3-METHYL-BENZYLIDENE)-BENZENE-1,2-DIAMINE', CHROMIUM ION, Myoglobin, ...
Authors:Koshiyama, T, Kono, M, Ohashi, M, Ueno, T, Suzuki, A, Yamane, T, Watanabe, Y.
Deposit date:2003-01-24
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Coordinated Design of Cofactor and Active Site Structures in Development of New Protein Catalysts
J.Am.Chem.Soc., 127, 2005
1ZOV
DownloadVisualize
BU of 1zov by Molmil
Crystal Structure of Monomeric Sarcosine Oxidase from Bacillus sp. NS-129
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase
Authors:Nagata, K, Sasaki, H, Ohtsuka, J, Hua, M, Okai, M, Kubota, K, Kamo, M, Ito, K, Ichikawa, T, Koyama, Y, Tanokura, M.
Deposit date:2005-05-14
Release date:2006-05-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of monomeric sarcosine oxidase from Bacillus sp. NS-129 reveals multiple conformations at the active-site loop
PROC.JPN.ACAD.,SER.B, 81, 2005
5LRS
DownloadVisualize
BU of 5lrs by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with glutathione and a 30-bp operator PrfA-box motif
Descriptor: DNA (30-MER), GLUTATHIONE, Listeriolysin positive regulatory factor A
Authors:Hall, M, Grundstrom, C, Begum, A, Lindberg, M, Sauer, U.H, Almqvist, F, Johansson, J, Sauer-Eriksson, A.E.
Deposit date:2016-08-19
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for glutathione-mediated activation of the virulence regulatory protein PrfA in Listeria.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
1A2D
DownloadVisualize
BU of 1a2d by Molmil
PYRIDOXAMINE MODIFIED MURINE ADIPOCYTE LIPID BINDING PROTEIN
Descriptor: ADIPOCYTE LIPID BINDING PROTEIN, CHLORIDE ION
Authors:Ory, J, Mazhary, A, Kuang, H, Davies, R, Distefano, M, Banaszak, L.
Deposit date:1997-12-29
Release date:1998-07-01
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural characterization of two synthetic catalysts based on adipocyte lipid-binding protein.
Protein Eng., 11, 1998
5GSY
DownloadVisualize
BU of 5gsy by Molmil
Kinesin-8 motor, KIF19A, in the nucleotide-free state complexed with GDP-taxol microtubule
Descriptor: Kinesin-like protein KIF19
Authors:Morikawa, M, Nitta, R, Yajima, H, Shigematsu, H, Kikkawa, M, Hirokawa, N.
Deposit date:2016-08-17
Release date:2016-09-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
1Y8L
DownloadVisualize
BU of 1y8l by Molmil
Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(trifluoro)ethyl] Thymidine (T*)
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(TFE)P*AP*CP*GP*C)-3'), MAGNESIUM ION, SPERMINE
Authors:Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharan, M.
Deposit date:2004-12-13
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications.
Biochemistry, 44, 2005
5GUP
DownloadVisualize
BU of 5gup by Molmil
Cryo-EM structure of mammalian respiratory supercomplex I1III2IV1
Descriptor: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ...
Authors:Gu, J, Wu, M, Guo, R, Yang, M.
Deposit date:2016-08-30
Release date:2017-03-29
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of Mammalian Respiratory Supercomplex I1III2IV1
Cell, 167, 2016
8WSV
DownloadVisualize
BU of 8wsv by Molmil
Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Descriptor: P-HYDROXYBENZOIC ACID, Transcriptional regulator HosA
Authors:Goswami, A, Raju, R, Kasarla, M, Ullah, S.
Deposit date:2023-10-17
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Biorxiv, 2024
6HFT
DownloadVisualize
BU of 6hft by Molmil
Hsp90 co-chaperone Cns1 from Saccharomyces cerevisiae (delta69)
Descriptor: Hsp70/Hsp90 co-chaperone CNS1, MAGNESIUM ION
Authors:Huber, E.M, Groll, M.
Deposit date:2018-08-21
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Co-chaperone Cns1 and the Recruiter Protein Hgh1 Link Hsp90 to Translation Elongation via Chaperoning Elongation Factor 2.
Mol.Cell, 74, 2019
3MF2
DownloadVisualize
BU of 3mf2 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Bll0957 protein, GLYCEROL, ...
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
8XB7
DownloadVisualize
BU of 8xb7 by Molmil
HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) bound with 4-hydroxy benzoic acid - Conformation II at 2.6 angstrom resolution
Descriptor: P-HYDROXYBENZOIC ACID, Transcriptional regulator HosA
Authors:Goswami, A, Raju, R, Kasarla, M.
Deposit date:2023-12-06
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Pre-binding structure of HosA transcriptional regulator from enteropathogenic Escherichia coli O127:H6 (strain E2348/69) in presence of sub optimal concentration of 4-hydroxy benzoic acid
Biorxiv, 2024
8T7N
DownloadVisualize
BU of 8t7n by Molmil
Crystal structure of the R132H mutant of IDH1 bound to compound 1
Descriptor: Isocitrate dehydrogenase [NADP] cytoplasmic, N-(4-tert-butylphenyl)-7,8-dimethyl-5,11-dihydro-6H-pyrido[2,3-b][1,5]benzodiazepine-6-carboxamide, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lu, J, Abeywickrema, P, Heo, M.R, Parthasarathy, G, McCoy, M, Soisson, S.M.
Deposit date:2023-06-20
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Mechanistic and Biostructural Studies of Mutant IDH1
To Be Published
8T7O
DownloadVisualize
BU of 8t7o by Molmil
Crystal structure of the R132H mutant of IDH1 bound to AG-120
Descriptor: Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ivosidenib
Authors:Lu, J, Abeywickrema, P, Heo, M.R, Parthasarathy, G, McCoy, M, Soisson, S.M.
Deposit date:2023-06-20
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Mechanistic and Biostructural Studies of Mutant IDH1
To Be Published
8T7D
DownloadVisualize
BU of 8t7d by Molmil
Crystal structure of wild type IDH1 bound to compound 1
Descriptor: Isocitrate dehydrogenase [NADP] cytoplasmic, N-(4-tert-butylphenyl)-7,8-dimethyl-5,11-dihydro-6H-pyrido[2,3-b][1,5]benzodiazepine-6-carboxamide
Authors:Lu, J, Abeywickrema, P, Heo, M.R, Parthasarathy, G, McCoy, M, Soisson, S.M.
Deposit date:2023-06-20
Release date:2024-08-28
Method:X-RAY DIFFRACTION (3.444 Å)
Cite:Mechanistic and Biostructural Studies of Mutant IDH1
To Be Published
5ICG
DownloadVisualize
BU of 5icg by Molmil
Crystal structure of apo (S)-norcoclaurine 6-O-methyltransferase
Descriptor: (S)-norcoclaurine 6-O-methyltransferase, POTASSIUM ION
Authors:Robin, A.Y, Graindorge, M, Giustini, C, Dumas, R, Matringe, M.
Deposit date:2016-02-23
Release date:2016-06-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of norcoclaurine-6-O-methyltransferase, a key rate-limiting step in the synthesis of benzylisoquinoline alkaloids.
Plant J., 87, 2016
1IX4
DownloadVisualize
BU of 1ix4 by Molmil
Crystal Structure of Rat Heme Oxygenase-1 in complex with Heme bound to Carbon Monoxide
Descriptor: CARBON MONOXIDE, HEME OXYGENASE-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sugishima, M, Sakamoto, H, Omata, Y, Hayashi, S, Noguchi, M, Fukuyama, K.
Deposit date:2002-06-10
Release date:2003-09-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Ferrous and CO-, CN(-)-, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O(2) in HO-1.
Biochemistry, 42, 2003

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon