Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52230 results

6QH2
DownloadVisualize
BU of 6qh2 by Molmil
Solution NMR ensemble for a chimeric KH-S1 domain construct of exosomal polynucleotide phosphrylase at 298K compiled using the CoMAND method
Descriptor: Polyribonucleotide nucleotidyltransferase
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-14
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
3TRQ
DownloadVisualize
BU of 3trq by Molmil
Crystal structure of native rabbit skeletal calsequestrin
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
Authors:Sanchez, E.J, Lewis, K.M, Munske, G.R, Nissen, M.S, Kang, C.
Deposit date:2011-09-09
Release date:2011-12-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Glycosylation of Skeletal Calsequestrin: IMPLICATIONS FOR ITS FUNCTION.
J.Biol.Chem., 287, 2012
6QFP
DownloadVisualize
BU of 6qfp by Molmil
Solution NMR ensemble for MlbQ at 298K compiled using the CoMAND method
Descriptor: Putative lipoprotein
Authors:ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
Deposit date:2019-01-10
Release date:2019-04-10
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
3TZB
DownloadVisualize
BU of 3tzb by Molmil
Quinone Oxidoreductase (NQ02) bound to NSC13000
Descriptor: 9-AMINOACRIDINE, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Dunstan, M.S, Leys, D.
Deposit date:2011-09-27
Release date:2011-11-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1901 Å)
Cite:In silico screening reveals structurally diverse, nanomolar inhibitors of NQO2 that are functionally active in cells and can modulate NF-kappa B signaling.
Mol.Cancer Ther., 11, 2012
6WBX
DownloadVisualize
BU of 6wbx by Molmil
Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S Class 1
Descriptor: CALCIUM ION, DUF3367 domain-containing protein
Authors:Tan, Y.Z, Zhang, L, Rodrigues, J, Zheng, R.B, Giacometti, S.I, Rosario, A.L, Kloss, B, Dandey, V.P, Wei, H, Brunton, R, Raczkowski, A.M, Athayde, D, Catalao, M.J, Pimentel, M, Clarke, O.B, Lowary, T.L, Archer, M, Niederweis, M, Potter, C.S, Carragher, B, Mancia, F.
Deposit date:2020-03-27
Release date:2020-05-13
Last modified:2020-06-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria.
Mol.Cell, 78, 2020
6WBY
DownloadVisualize
BU of 6wby by Molmil
Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S Class 2
Descriptor: CALCIUM ION, DUF3367 domain-containing protein
Authors:Tan, Y.Z, Zhang, L, Rodrigues, J, Zheng, R.B, Giacometti, S.I, Rosario, A.L, Kloss, B, Dandey, V.P, Wei, H, Brunton, R, Raczkowski, A.M, Athayde, D, Catalao, M.J, Pimentel, M, Clarke, O.B, Lowary, T.L, Archer, M, Niederweis, M, Potter, C.S, Carragher, B, Mancia, F.
Deposit date:2020-03-27
Release date:2020-05-13
Last modified:2020-06-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structures and Regulation of Arabinofuranosyltransferase AftD from Mycobacteria.
Mol.Cell, 78, 2020
1LZN
DownloadVisualize
BU of 1lzn by Molmil
NEUTRON STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor: NITRATE ION, PROTEIN (LYSOZYME), SODIUM ION
Authors:Bon, C.I, Lehmann, M.S, Wilkinson, C.
Deposit date:1999-03-23
Release date:1999-04-01
Last modified:2023-12-27
Method:NEUTRON DIFFRACTION (1.7 Å)
Cite:Quasi-Laue neutron-diffraction study of the water arrangement in crystals of triclinic hen egg-white lysozyme.
Acta Crystallogr.,Sect.D, 55, 1999
1W0D
DownloadVisualize
BU of 1w0d by Molmil
The high resolution structure of Mycobacterium tuberculosis LeuB (Rv2995c)
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE, SULFATE ION
Authors:Singh, R.K, Kefala, G, Janowski, R, Mueller-Dieckmann, C, Weiss, M.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-06-03
Release date:2004-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The High Resolution Structure of Leub (Rv2995C) from Mycobacterium Tuberculosis
J.Mol.Biol., 346, 2005
3MMK
DownloadVisualize
BU of 3mmk by Molmil
The structural basis for partial redundancy in a class of transcription factors, the lim-homeodomain proteins, in neural cell type specification
Descriptor: CHLORIDE ION, Fusion of LIM/homeobox protein Lhx4, linker, ...
Authors:Gadd, M.S, Langley, D.B, Guss, J.M, Matthews, J.M.
Deposit date:2010-04-20
Release date:2011-07-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.157 Å)
Cite:The structural basis for partial redundancy in a class of transcription factors, the lim-homeodomain proteins, in neural cell type specification.
J.Biol.Chem., 2011
3M13
DownloadVisualize
BU of 3m13 by Molmil
Crystal Structure of the Lys265Arg PEG-crystallized mutant of monomeric sarcosine oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase, ...
Authors:Mathews, F.S, Chen, Z.-W, Jorns, M.S.
Deposit date:2010-03-04
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of mutations at the oxygen activation site in monomeric sarcosine oxidase.
Biochemistry, 49, 2010
3TNU
DownloadVisualize
BU of 3tnu by Molmil
Heterocomplex of coil 2B domains of human intermediate filament proteins, keratin 5 (KRT5) and keratin 14 (KRT14)
Descriptor: Keratin, type I cytoskeletal 14, type II cytoskeletal 5
Authors:Lee, C.H, Kim, M.S, Leahy, D.J, Coulombe, P.A.
Deposit date:2011-09-02
Release date:2012-06-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Structural basis for heteromeric assembly and perinuclear organization of keratin filaments.
Nat.Struct.Mol.Biol., 19, 2012
5ITD
DownloadVisualize
BU of 5itd by Molmil
Crystal structure of PI3K alpha with PI3K delta inhibitor
Descriptor: 5-{4-[3-(4-acetylpiperazine-1-carbonyl)phenyl]quinazolin-6-yl}-2-methoxypyridine-3-carbonitrile, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Knapp, M.S, Elling, R.A.
Deposit date:2016-03-16
Release date:2016-09-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Discovery and Pharmacological Characterization of Novel Quinazoline-Based PI3K Delta-Selective Inhibitors.
Acs Med.Chem.Lett., 7, 2016
2Y6R
DownloadVisualize
BU of 2y6r by Molmil
Structure of the TetX monooxygenase in complex with the substrate 7- chlortetracycline
Descriptor: 7-CHLOROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Volkers, G, Palm, G.J, Weiss, M.S, Wright, G.D, Hinrichs, W.
Deposit date:2011-01-25
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for a New Tetracycline Resistance Mechanism Relying on the Tetx Monooxygenase.
FEBS Lett., 585, 2011
3L1V
DownloadVisualize
BU of 3l1v by Molmil
Crystal structure of GmhB from E. coli in complex with calcium and phosphate.
Descriptor: CALCIUM ION, D,D-heptose 1,7-bisphosphate phosphatase, PHOSPHATE ION, ...
Authors:Sugiman-Marangos, S.N, Junop, M.S.
Deposit date:2009-12-14
Release date:2010-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Structural and kinetic characterization of the LPS biosynthetic enzyme D-alpha,beta-D-heptose-1,7-bisphosphate phosphatase (GmhB) from Escherichia coli.
Biochemistry, 49, 2010
2Y6Q
DownloadVisualize
BU of 2y6q by Molmil
Structure of the TetX monooxygenase in complex with the substrate 7- Iodtetracycline
Descriptor: 7-IODOTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Volkers, G, Palm, G.J, Weiss, M.S, Wright, G.D, Hinrichs, W.
Deposit date:2011-01-25
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural Basis for a New Tetracycline Resistance Mechanism Relying on the Tetx Monooxygenase.
FEBS Lett., 585, 2011
6DHG
DownloadVisualize
BU of 6dhg by Molmil
RT XFEL structure of Photosystem II 150 microseconds after the second illumination at 2.5 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Chatterjee, R, Young, I.D, Fuller, F.D, Lassalle, L, Ibrahim, M, Gul, S, Fransson, T, Brewster, A.S, Alonso-Mori, R, Hussein, R, Zhang, M, Douthit, L, de Lichtenberg, C, Cheah, M.H, Shevela, D, Wersig, J, Seufert, I, Sokaras, D, Pastor, E, Weninger, C, Kroll, T, Sierra, R.G, Aller, P, Butryn, A, Orville, A.M, Liang, M, Batyuk, A, Koglin, J.E, Carbajo, S, Boutet, S, Moriarty, N.W, Holton, J.M, Dobbek, H, Adams, P.D, Bergmann, U, Sauter, N.K, Zouni, A, Messinger, J, Yano, J, Yachandra, V.K.
Deposit date:2018-05-20
Release date:2018-11-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the intermediates of Kok's photosynthetic water oxidation clock.
Nature, 563, 2018
1XW4
DownloadVisualize
BU of 1xw4 by Molmil
Crystal Structure of Human Sulfiredoxin (Srx) in Complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Sulfiredoxin
Authors:Murray, M.S, Jonsson, T.J, Johnson, L.C, Poole, L.B, Lowther, W.T.
Deposit date:2004-10-29
Release date:2005-05-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the retroreduction of inactivated peroxiredoxins by human sulfiredoxin.
Biochemistry, 44, 2005
1XD9
DownloadVisualize
BU of 1xd9 by Molmil
Crystal Structure of the Nitrogenase Fe protein Asp39Asn with MgADP bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Jang, S.B, Jeong, M.S, Seefeldt, L.C, Peters, J.W.
Deposit date:2004-09-05
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical implications of single amino acid substitutions in the nucleotide-dependent switch regions of the nitrogenase Fe protein from Azotobacter vinelandii
J.Biol.Inorg.Chem., 9, 2004
3KJQ
DownloadVisualize
BU of 3kjq by Molmil
Caspase 8 with covalent inhibitor
Descriptor: (3S)-3-({[(5S,8R)-2-(3-carboxypropyl)-8-(2-{[(4-chlorophenyl)acetyl]amino}ethyl)-1,3-dioxo-2,3,5,8-tetrahydro-1H-[1,2,4]triazolo[1,2-a]pyridazin-5-yl]carbonyl}amino)-4-oxopentanoic acid, Caspase-8
Authors:Kamtekar, S, Watt, W, Finzel, B.C, Harris, M.S, Blinn, J, Wang, Z, Tomasselli, A.G.
Deposit date:2009-11-03
Release date:2010-08-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Kinetic and structural characterization of caspase-3 and caspase-8 inhibition by a novel class of irreversible inhibitors.
Biochim.Biophys.Acta, 1804, 2010
3MM0
DownloadVisualize
BU of 3mm0 by Molmil
Crystal structure of chimeric avidin
Descriptor: Avidin, Avidin-related protein 4/5
Authors:Livnah, O, Eisenberg-Domovich, Y, Maatta, J.A.E, Kulomaa, M.S, Hytonen, V.P, Nordlund, H.R.
Deposit date:2010-04-19
Release date:2010-10-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Chimeric avidin shows stability against harsh chemical conditions-biochemical analysis and 3D structure.
Biotechnol.Bioeng., 108, 2011
1XVQ
DownloadVisualize
BU of 1xvq by Molmil
Crystal structure of thiol peroxidase from Mycobacterium tuberculosis
Descriptor: AMMONIUM ION, YTTRIUM (III) ION, thiol peroxidase
Authors:Rho, B.S, Pedelacq, J.D, Hung, L.W, Holton, J.M, Vigil, D, Kim, S.I, Park, M.S, Terwilliger, T.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-10-28
Release date:2004-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and Structural Characterization of a Thiol Peroxidase from Mycobacterium tuberculosis.
J.Mol.Biol., 361, 2006
1XWR
DownloadVisualize
BU of 1xwr by Molmil
Crystal structure of the coliphage lambda transcription activator protein CII
Descriptor: ISOPROPYL ALCOHOL, Regulatory protein CII
Authors:Datta, A.B, Panjikar, S, Weiss, M.S, Chakrabarti, P, Parrack, P.
Deposit date:2004-11-02
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of {lambda} CII: Implications for recognition of direct-repeat DNA by an unusual tetrameric organization
Proc.Natl.Acad.Sci.USA, 102, 2005
2YNT
DownloadVisualize
BU of 2ynt by Molmil
GIM-1-3Mol native. Crystal structures of Pseudomonas aeruginosa GIM- 1: active site plasticity in metallo-beta-lactamases
Descriptor: GIM-1 PROTEIN, GLYCEROL, ZINC ION
Authors:Borra, P.S, Samuelsen, O, Spencer, J, Lorentzen, M.S, Leiros, H.-K.S.
Deposit date:2012-10-18
Release date:2013-07-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal Structures of Pseudomonas Aeruginosa Gim-1: Active-Site Plasticity in Metallo-Beta-Lactamases.
Antimicrob.Agents Chemother., 57, 2013
1O8W
DownloadVisualize
BU of 1o8w by Molmil
Radiation-reduced Tryparedoxin-I
Descriptor: TRYPAREDOXIN
Authors:Alphey, M.S, Bond, C.S, Hunter, W.N.
Deposit date:2002-12-09
Release date:2003-08-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
2YNW
DownloadVisualize
BU of 2ynw by Molmil
GIM-1-2Mol native. Crystal structures of Pseudomonas aeruginosa GIM- 1: active site plasticity in metallo-beta-lactamases
Descriptor: GIM-1 PROTEIN, GLYCEROL, SULFATE ION, ...
Authors:Borra, P.S, Samuelsen, O, Spencer, J, Lorentzen, M.S, Leiros, H.-K.S.
Deposit date:2012-10-18
Release date:2013-07-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Pseudomonas Aeruginosa Gim-1: Active-Site Plasticity in Metallo-Beta-Lactamases.
Antimicrob.Agents Chemother., 57, 2013

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon