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PDB: 51964 results

1UFG
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Solution structure of immunoglobulin like domain of mouse nuclear lamin
Descriptor: Lamin A
Authors:Kobayashi, N, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-29
Release date:2004-06-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of immunoglobulin like domain of mouse nuclear lamin
To be Published
2ROE
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BU of 2roe by Molmil
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-20
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
7KFF
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Crystal structure of TrmD tRNA (guanine-N1)-methyltransferase from Corynebacterium diphtheriae in complex with SAH
Descriptor: ACETATE ION, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine-N(1)-)-methyltransferase
Authors:Michalska, K, Tanase, L, Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-10-13
Release date:2020-10-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of TrmD tRNA (guanine-N1)-methyltransferase from Corynebacterium diphtheriae in complex with SAH
To Be Published
4YN3
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Crystal structure of Cucumisin complex with pro-peptide
Descriptor: CHLORIDE ION, Cucumisin, DI(HYDROXYETHYL)ETHER, ...
Authors:Murayama, K, Kato-Murayama, M, Yokoyama, S, Arima, K, Shirouzu, M.
Deposit date:2015-03-09
Release date:2016-03-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of cucumisin protease activity regulation by its propeptide
J. Biochem., 161, 2017
1TPN
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BU of 1tpn by Molmil
SOLUTION STRUCTURE OF THE FIBRIN BINDING FINGER DOMAIN OF TISSUE-TYPE PLASMINOGEN ACTIVATOR DETERMINED BY 1H NUCLEAR MAGNETIC RESONANCE
Descriptor: TISSUE-TYPE PLASMINOGEN ACTIVATOR
Authors:Downing, A.K, Driscoll, P.C, Harvey, T.S, Dudgeon, T.J, Smith, B.O, Baron, M, Campbell, I.D.
Deposit date:1993-05-26
Release date:1994-01-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of the fibrin binding finger domain of tissue-type plasminogen activator determined by 1H nuclear magnetic resonance.
J.Mol.Biol., 225, 1992
1U0T
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Crystal structure of Mycobacterium tuberculosis NAD kinase
Descriptor: Inorganic polyphosphate/ATP-NAD kinase
Authors:Garavaglia, S, Raffaelli, N, Finaurini, L, Magni, G, Rizzi, M, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-14
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel fold revealed by Mycobacterium tuberculosis NAD kinase, a key allosteric enzyme in NADP biosynthesis
J.Biol.Chem., 279, 2004
1TR1
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CRYSTAL STRUCTURE OF E96K MUTATED BETA-GLUCOSIDASE A FROM BACILLUS POLYMYXA, AN ENZYME WITH INCREASED THERMORESISTANCE
Descriptor: BETA-GLUCOSIDASE A, GLYCEROL
Authors:Sanz-Aparicio, J, Hermoso, J.A, Martinez-Ripoll, M, Gonzalez-Perez, B, Polaina, J.
Deposit date:1998-03-12
Release date:1999-04-20
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of beta-glucosidase A from Bacillus polymyxa: insights into the catalytic activity in family 1 glycosyl hydrolases.
J.Mol.Biol., 275, 1998
7KSL
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Substrate-free human mitochondrial LONP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C.
Deposit date:2020-11-23
Release date:2020-12-09
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human LONP1 protease reveal regulatory steps involved in protease activation.
Nat Commun, 12, 2021
1U1H
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A. thaliana cobalamine independent methionine synthase
Descriptor: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, METHIONINE, SULFATE ION, ...
Authors:Ferrer, J.-L, Ravanel, S, Robert, M, Dumas, R.
Deposit date:2004-07-15
Release date:2004-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of cobalamin-independent methionine synthase complexed with zinc, homocysteine, and methyltetrahydrofolate
J.Biol.Chem., 279, 2004
1TZ4
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[hPP19-23]-pNPY bound to DPC Micelles
Descriptor: neuropeptide Y,Pancreatic prohormone,neuropeptide Y
Authors:Lerch, M, Kamimori, H, Folkers, G, Aguilar, M.I, Beck-Sickinger, A.G, Zerbe, O.
Deposit date:2004-07-09
Release date:2005-07-05
Last modified:2020-01-01
Method:SOLUTION NMR
Cite:Strongly Altered Receptor Binding Properties in PP and NPY Chimeras Are Accompanied by Changes in Structure and Membrane Binding
Biochemistry, 44, 2005
1U3B
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Auto-inhibition Mechanism of X11s/Mints Family Scaffold Proteins Revealed by the Closed Conformation of the Tandem PDZ Domains
Descriptor: amyloid beta A4 precursor protein-binding, family A, member 1
Authors:Feng, W, Long, J.-F, Chan, L.-N, He, C, Fu, A, Xia, J, Ip, N.Y, Zhang, M.
Deposit date:2004-07-21
Release date:2005-07-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Autoinhibition of X11/Mint scaffold proteins revealed by the closed conformation of the PDZ tandem
Nat.Struct.Mol.Biol., 12, 2005
7KSC
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BU of 7ksc by Molmil
Crystal structure of Pun g 1.0101
Descriptor: Non-specific lipid-transfer protein, SULFATE ION
Authors:Pote, S, O'Malley, A, Gawlicka-Chruszcz, A, Tuppo, L, Ciardiello, M.A, Chruszcz, M.
Deposit date:2020-11-21
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Characterization of Act c 10.0101 and Pun g 1.0101-Allergens from the Non-Specific Lipid Transfer Protein Family.
Molecules, 26, 2021
4YST
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Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 24.9 MGy
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ...
Authors:Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E.
Deposit date:2015-03-17
Release date:2016-02-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
1U45
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8oxoguanine at the pre-insertion site of the polymerase active site
Descriptor: DNA polymerase I, DNA primer strand, DNA template strand with 8-oxoguanine, ...
Authors:Hsu, G.W, Ober, M, Carell, T, Beese, L.S.
Deposit date:2004-07-23
Release date:2004-09-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase.
Nature, 431, 2004
1U16
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Crystal structure of a duck-delta-crystallin-1 double loop mutant (DLM) in complex with sulfate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, Delta crystallin I, ...
Authors:Tsai, M, Sampaleanu, L.M, Greene, C, Creagh, L, Haynes, C, Howell, P.L.
Deposit date:2004-07-14
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A duck delta1 crystallin double loop mutant provides insight into residues important for argininosuccinate lyase activity.
Biochemistry, 43, 2004
4YUS
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BU of 4yus by Molmil
Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in hexagonal form
Descriptor: FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase
Authors:Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M.
Deposit date:2015-03-19
Release date:2016-06-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium
Proc.Natl.Acad.Sci.USA, 113, 2016
1FB1
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CRYSTAL STRUCTURE OF HUMAN GTP CYCLOHYDROLASE I
Descriptor: GTP CYCLOHYDROLASE I, ISOPROPYL ALCOHOL, ZINC ION
Authors:Auerbach, G, Herrmann, A, Bracher, A, Bader, G, Gutlich, M, Fischer, M, Neukamm, M, Nar, H, Garrido-Franco, M, Richardson, J, Huber, R, Bacher, A.
Deposit date:2000-07-14
Release date:2000-12-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Zinc plays a key role in human and bacterial GTP cyclohydrolase I.
Proc.Natl.Acad.Sci.USA, 97, 2000
3IBZ
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BU of 3ibz by Molmil
Crystal structure of putative tellurium resistant like protein (TerD) from Streptomyces coelicolor A3(2)
Descriptor: CALCIUM ION, Putative tellurium resistant like protein TerD, SULFATE ION
Authors:Klimecka, M, Chruszcz, M, Cymborowski, M, Xu, X, Cui, H, Joachimiak, A, Edwards, A, Savchenko, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-07-17
Release date:2009-08-18
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of putative tellurium resistant like protein (TerD) from Streptomyces coelicolor A3(2)
To be Published
1TS5
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BU of 1ts5 by Molmil
I140T MUTANT OF TOXIC SHOCK SYNDROME TOXIN-1 FROM S. AUREUS
Descriptor: TOXIC SHOCK SYNDROME TOXIN-1
Authors:Earhart, C.A, Mitchell, D.T, Murray, D.L, Pinheiro, D.M, Matsumura, M, Schlievert, P.M, Ohlendorf, D.H.
Deposit date:1997-10-10
Release date:1998-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of five mutants of toxic shock syndrome toxin-1 with reduced biological activity.
Biochemistry, 37, 1998
4YOP
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BU of 4yop by Molmil
CRYSTAL STRUCTURE OF HEN EGG-WHITE LYSOZYME
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Nakane, T, Suzuki, M, Nango, E.
Deposit date:2015-03-12
Release date:2015-12-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Native sulfur/chlorine SAD phasing for serial femtosecond crystallography
Acta Crystallogr.,Sect.D, 71, 2015
1UEB
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Crystal structure of translation elongation factor P from Thermus thermophilus HB8
Descriptor: elongation factor P
Authors:Hanawa-Suetsugu, K, Sekine, S, Sakai, H, Hori-Takemoto, C, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-09
Release date:2004-05-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of elongation factor P from Thermus thermophilus HB8
Proc.Natl.Acad.Sci.USA, 101, 2004
1UEQ
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Solution Structure of The First PDZ domain of Human Atrophin-1 Interacting Protein 1 (KIAA0705 protein)
Descriptor: MEMBRANE ASSOCIATED GUANYLATE KINASE INVERTED-2 (MAGI-2)
Authors:Zhao, C, Kigawa, T, Tochio, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-05-20
Release date:2003-11-20
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of The First PDZ domain of Human Atrophin-1 Interacting Protein 1 (KIAA0705 protein)
To be Published
1FHO
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BU of 1fho by Molmil
Solution Structure of the PH Domain from the C. Elegans Muscle Protein UNC-89
Descriptor: UNC-89
Authors:Blomberg, N, Baraldi, E, Sattler, M, Saraste, M, Nilges, M.
Deposit date:2000-08-02
Release date:2000-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a PH domain from the C. elegans muscle protein UNC-89 suggests a novel function.
Structure Fold.Des., 8, 2000
4FR4
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Crystal structure of human serine/threonine-protein kinase 32A (YANK1)
Descriptor: 1,2-ETHANEDIOL, STAUROSPORINE, Serine/threonine-protein kinase 32A
Authors:Chaikuad, A, Elkins, J.M, Krojer, T, Mahajan, P, Goubin, S, Szklarz, M, Tumber, A, Wang, J, Savitsky, P, Shrestha, B, Daga, N, Picaud, S, Fedorov, O, Allerston, C.K, Latwiel, S.V.A, Vollmar, M, Canning, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2012-06-26
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of human serine/threonine-protein kinase 32A (YANK1)
To be Published
4FBL
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LipS and LipT, two metagenome-derived lipolytic enzymes increase the diversity of known lipase and esterase families
Descriptor: CHLORIDE ION, LipS lipolytic enzyme, SPERMIDINE
Authors:Chow, J, Krauss, U, Dall Antonia, Y, Fersini, F, Schmeisser, C, Schmidt, M, Menyes, I, Bornscheuer, U, Lauinger, B, Bongen, P, Pietruszka, J, Eckstein, M, Thum, O, Liese, A, Mueller-Dieckmann, J, Jaeger, K.-E, Kovacic, F, Streit, W.R, Structural Proteomics in Europe (SPINE)
Deposit date:2012-05-23
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The Metagenome-Derived Enzymes LipS and LipT Increase the Diversity of Known Lipases.
Plos One, 7, 2012

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