Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51964 results

5C6X
DownloadVisualize
BU of 5c6x by Molmil
Crystal structure of C-As lyase with Co(II)
Descriptor: COBALT (II) ION, GLYCEROL, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
Authors:Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
Deposit date:2015-06-23
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of C-As lyase with Co(II)
To Be Published
5C7L
DownloadVisualize
BU of 5c7l by Molmil
Structure of human testis-specific glyceraldehyde-3-phosphate dehydrogenase apo form
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, testis-specific
Authors:Betts, L, Machius, M, Danshina, P, O'Brien, D.
Deposit date:2015-06-24
Release date:2016-03-09
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.862 Å)
Cite:Structural analyses to identify selective inhibitors of glyceraldehyde 3-phosphate dehydrogenase-S, a sperm-specific glycolytic enzyme.
Mol. Hum. Reprod., 22, 2016
1UDW
DownloadVisualize
BU of 1udw by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
Descriptor: CYTIDINE-5'-TRIPHOSPHATE, Uridine-cytidine kinase 2
Authors:Suzuki, N.N, Koizumi, K, Fukushima, M, Matsuda, A, Inagaki, F.
Deposit date:2003-05-07
Release date:2004-05-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the specificity, catalysis, and regulation of human uridine-cytidine kinase
STRUCTURE, 12, 2004
3PH7
DownloadVisualize
BU of 3ph7 by Molmil
Crystal structure of Plasmodium vivax putative polyprenyl pyrophosphate synthase in complex with geranylgeranyl diphosphate
Descriptor: Farnesyl pyrophosphate synthase, GERANYLGERANYL DIPHOSPHATE
Authors:Wernimont, A.K, Dunford, J, Lew, J, Zhao, Y, Kozieradzki, I, Cossar, D, Schapiro, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2010-11-03
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites.
J.Biol.Chem., 286, 2011
5N4A
DownloadVisualize
BU of 5n4a by Molmil
Crystal structure of Chlamydomonas IFT80
Descriptor: GLYCEROL, Intraflagellar transport protein 80, OXALATE ION
Authors:Taschner, M, Mourao, A.
Deposit date:2017-02-10
Release date:2018-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of intraflagellar transport protein 80 reveals a homo-dimer required for ciliogenesis.
Elife, 7, 2018
3I72
DownloadVisualize
BU of 3i72 by Molmil
Structural characterization for the nucleotide binding ability of subunit A with SO4 of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, A-TYPE ATP SYNTHASE CATALYTIC SUBUNIT A, ...
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution.
J.Mol.Biol., 396, 2010
5CI9
DownloadVisualize
BU of 5ci9 by Molmil
Crystal structure of human Tob in complex with inhibitor fragment 6
Descriptor: 1-(propan-2-yl)-1H-benzimidazole-5-carboxylic acid, Protein Tob1, SODIUM ION
Authors:Bai, Y, Tashiro, S, Nagatoishi, S, Suzuki, T, Tsumoto, K, Bartlam, M, Yamamoto, T.
Deposit date:2015-07-11
Release date:2015-11-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of the Tob-CNOT7 interaction by a fragment screening approach
Protein Cell, 6, 2015
3VSA
DownloadVisualize
BU of 3vsa by Molmil
Crystal Structure of O-phosphoserine sulfhydrylase without acetate
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, PYRIDOXAL-5'-PHOSPHATE, Protein CysO
Authors:Nakamura, T, Kawai, Y, Kataoka, M, Ishikawa, K.
Deposit date:2012-04-24
Release date:2012-05-16
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural analysis of the substrate recognition mechanism in O-phosphoserine sulfhydrylase from the hyperthermophilic archaeon Aeropyrum pernix K1
J.Mol.Biol., 422, 2012
5CB9
DownloadVisualize
BU of 5cb9 by Molmil
Crystal structure of C-As lyase with mercaptoethonal
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, Glyoxalase/bleomycin resistance protein/dioxygenase, ...
Authors:Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
Deposit date:2015-06-30
Release date:2016-07-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of C-As lyase with mercaptoethonal
To Be Published
5NFZ
DownloadVisualize
BU of 5nfz by Molmil
TUBULIN-MTC complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-methoxy-5-(2,3,4-trimethoxyphenyl)cyclohepta-2,4,6-trien-1-one, CALCIUM ION, ...
Authors:Field, J.J, Pera, B, Estevez Gallego, J, Calvo, E, Rodriguez-Salarichs, J, Saez-Calvo, G, Zuwerra, D, Jordi, M, Prota, A.E, Menchon, G, Miller, J.H, Altmann, K.-H, Diaz, J.F.
Deposit date:2017-03-16
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Zampanolide Binding to Tubulin Indicates Cross-Talk of Taxane Site with Colchicine and Nucleotide Sites.
J. Nat. Prod., 81, 2018
2MJ5
DownloadVisualize
BU of 2mj5 by Molmil
Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin
Descriptor: Next to BRCA1 gene 1 protein, Polyubiquitin-C
Authors:Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
Deposit date:2013-12-25
Release date:2014-04-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014
5NCO
DownloadVisualize
BU of 5nco by Molmil
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
Descriptor: 23S rRNA, 4.5S SRP RNA (Ffs), 50S ribosomal protein L10, ...
Authors:Jomaa, A, Hwang Fu, Y, Boerhinger, D, Leibundgut, M, Shan, S.O, Ban, N.
Deposit date:2017-03-06
Release date:2017-05-24
Last modified:2018-03-28
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of the quaternary complex between SRP, SR, and translocon bound to the translating ribosome.
Nat Commun, 8, 2017
5NJY
DownloadVisualize
BU of 5njy by Molmil
X-ray structure of the H235Q mutant of GLIC
Descriptor: Proton-gated ion channel
Authors:Hu, H, Fourati, Z, Delarue, M.
Deposit date:2017-03-30
Release date:2018-05-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:X-ray structure of the H235Q mutant of GLIC
To Be Published
5CJJ
DownloadVisualize
BU of 5cjj by Molmil
The crystal structure of phosphoribosylglycinamide formyltransferase from Campylobacter jejuni subsp. jejuni NCTC 11168
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-07-14
Release date:2015-07-29
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:The crystal structure of phosphoribosylglycinamide formyltransferase from Campylobacter jejuni subsp. jejuni NCTC 11168
To Be Published
7EDS
DownloadVisualize
BU of 7eds by Molmil
Human p53 core domain with germline hot spot mutation M133T in complex with the natural PIG3 p53-response element and Arsenic
Descriptor: ARSENIC, Cellular tumor antigen p53, PIG3 anti-sense strand, ...
Authors:Xing, Y.F, Lu, M.
Deposit date:2021-03-17
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Arsenic-bound p53 Hotspot mutant M133T in complex with the natural PIG3 p53-response element
To Be Published
7EEU
DownloadVisualize
BU of 7eeu by Molmil
Human p53 core domain with hot spot mutation R282W in complex with the natural CDKN1A(p21) p53-response element and Arsenic
Descriptor: ARSENIC, CDKN1A(p21) anti-sense strand, CDKN1A(p21) sense strand, ...
Authors:Xing, Y.F, Lu, M.
Deposit date:2021-03-19
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Human p53 core domain with hot spot mutation R282W in complex with the natural CDKN1A(p21) p53-response element and Arsenic
To Be Published
5NDY
DownloadVisualize
BU of 5ndy by Molmil
crystal structure of variants
Descriptor: Geranylgeranylglyceryl phosphate synthase
Authors:Linde, M, Rajendran, C, Babinger, P, Sterner, R.
Deposit date:2017-03-09
Release date:2018-05-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:crystal structure of variants from MtGGGPS
To Be Published
1UD1
DownloadVisualize
BU of 1ud1 by Molmil
Crystal structure of proglycinin mutant C88S
Descriptor: Glycinin G1
Authors:Utsumi, S, Adachi, M.
Deposit date:2003-04-24
Release date:2004-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structures and Structural Stabilities of the Disulfide Bond-Deficient Soybean Proglycinin Mutants C12G and C88S.
J.Agric.Food Chem., 51, 2003
5NN8
DownloadVisualize
BU of 5nn8 by Molmil
Crystal structure of human lysosomal acid-alpha-glucosidase, GAA, in complex with acarbose
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roig-Zamboni, V, Cobucci-Ponzano, B, Iacono, R, Ferrara, M.C, Germany, S, Parenti, G, Bourne, Y, Moracci, M.
Deposit date:2017-04-08
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of human lysosomal acid alpha-glucosidase-a guide for the treatment of Pompe disease.
Nat Commun, 8, 2017
3Q0W
DownloadVisualize
BU of 3q0w by Molmil
ETHR From mycobacterium tuberculosis in complex with compound BDM33066
Descriptor: (2S)-2-amino-3-methyl-1-{4-[3-(thiophen-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}butan-1-one, GLYCEROL, HTH-type transcriptional regulator EthR
Authors:Flipo, M, Desrose, M, Dirie, B, Carette, X, Leroux, F, Lens, Z, Rucktooa, P, Piveteau, C, Demirkaya, F, Locht, C, Villeret, V, Christophe, T, Jeon, H.K, Brodin, P, Deprez, B, Baulard, A, Willand, N.
Deposit date:2010-12-16
Release date:2011-12-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural activation of the transcriptional repressor EthR from Mycobacterium tuberculosis by single amino acid change mimicking natural and synthetic ligands.
Nucleic Acids Res., 40, 2012
5CO1
DownloadVisualize
BU of 5co1 by Molmil
Crystal Structure of Zebrafish Protocadherin-19 EC3-4
Descriptor: CALCIUM ION, Protocadherin-19 isoform 1
Authors:Cooper, S.R, Jontes, J.D, Sotomayor, M.
Deposit date:2015-07-19
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural determinants of adhesion by Protocadherin-19 and implications for its role in epilepsy.
Elife, 5, 2016
5NNL
DownloadVisualize
BU of 5nnl by Molmil
Inactive dihydroorotase-like domain of Chaetomium thermophilum CAD-like multifunctional protein
Descriptor: Inactive dihydroorotase-like domain
Authors:Ramon-Maiques, S, Moreno-Morcillo, M, Grande-Garcia, A.
Deposit date:2017-04-10
Release date:2017-06-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structural Insight into the Core of CAD, the Multifunctional Protein Leading De Novo Pyrimidine Biosynthesis.
Structure, 25, 2017
1TO5
DownloadVisualize
BU of 1to5 by Molmil
Structure of the cytosolic Cu,Zn SOD from S. mansoni
Descriptor: ACETATE ION, COPPER (II) ION, Superoxide dismutase, ...
Authors:Cardoso, R.M.F, Silva, C.H.T.P, Ulian de Araujo, A.P, Tanaka, T, Tanaka, M, Garratt, R.C.
Deposit date:2004-06-12
Release date:2004-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the cytosolic Cu,Zn superoxide dismutase from Schistosoma mansoni.
Acta Crystallogr.,Sect.D, 60, 2004
7DTI
DownloadVisualize
BU of 7dti by Molmil
Solution structure of the complex between RNA polymerase subunit RPB6 and TFIIH p62 PH domain
Descriptor: DNA-directed RNA polymerases I, II, and III subunit RPABC2, ...
Authors:Okuda, M, Nishimura, Y.
Deposit date:2021-01-05
Release date:2022-08-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Three human RNA polymerases interact with TFIIH via a common RPB6 subunit.
Nucleic Acids Res., 50, 2022
5C8I
DownloadVisualize
BU of 5c8i by Molmil
Joint X-ray/neutron structure of Human Carbonic Anhydrase II in complex with Methazolamide
Descriptor: Carbonic anhydrase 2, N-(3-methyl-5-sulfamoyl-1,3,4-thiadiazol-2(3H)-ylidene)acetamide, ZINC ION
Authors:Aggarwal, M, Kovalevsky, A.Y, Fisher, S.Z, McKenna, R.
Deposit date:2015-06-25
Release date:2016-07-20
Last modified:2024-03-06
Method:NEUTRON DIFFRACTION (1.56 Å), X-RAY DIFFRACTION
Cite:Neutron structure of human carbonic anhydrase II in complex with methazolamide: mapping the solvent and hydrogen-bonding patterns of an effective clinical drug.
IUCrJ, 3, 2016

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon