Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 147 results

1FFI
DownloadVisualize
BU of 1ffi by Molmil
STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2000-07-25
Release date:2001-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes.
Proteins, 43, 2001
1FGC
DownloadVisualize
BU of 1fgc by Molmil
STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2000-07-28
Release date:2001-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes.
Proteins, 43, 2001
1L5B
DownloadVisualize
BU of 1l5b by Molmil
DOMAIN-SWAPPED CYANOVIRIN-N DIMER
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, cyanovirin-N
Authors:Barrientos, L.G, Louis, J.M, Botos, I, Mori, T, Han, Z, O'Keefe, B.R, Boyd, M.R, Wlodawer, A, Gronenborn, A.M.
Deposit date:2002-03-06
Release date:2002-05-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The domain-swapped dimer of cyanovirin-N is in a metastable folded state: reconciliation of X-ray and NMR structures.
Structure, 10, 2002
1Q10
DownloadVisualize
BU of 1q10 by Molmil
Ensemble of 40 Structures of the Dimeric Mutant of the B1 Domain of Streptococcal Protein G
Descriptor: Immunoglobulin G binding protein G
Authors:Byeon, I.J, Louis, J.M, Gronenborn, A.M.
Deposit date:2003-07-18
Release date:2003-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A Protein Contortionist: Core Mutations of GB1 that Induce Dimerization and Domain Swapping
J.Mol.Biol., 333, 2003
1L5I
DownloadVisualize
BU of 1l5i by Molmil
30-CONFORMER NMR ENSEMBLE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW LEAF CURL VIRUS-SARDINIA)
Descriptor: Rep protein
Authors:Campos-Olivas, R, Louis, J.M, Clerot, D, Gronenborn, B, Gronenborn, A.M.
Deposit date:2002-03-07
Release date:2002-09-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of a replication initiator unites diverse aspects of nucleic acid metabolism
Proc.Natl.Acad.Sci.USA, 99, 2002
1L2M
DownloadVisualize
BU of 1l2m by Molmil
Minimized Average Structure of the N-terminal, DNA-binding domain of the replication initiation protein from a geminivirus (Tomato yellow leaf curl virus-Sardinia)
Descriptor: Rep protein
Authors:Campos-Olivas, R, Louis, J.M, Clerot, D, Gronenborn, B, Gronenborn, A.M.
Deposit date:2002-02-22
Release date:2002-09-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of a replication initiator unites diverse aspects of nucleic acid metabolism
Proc.Natl.Acad.Sci.USA, 99, 2002
3TKW
DownloadVisualize
BU of 3tkw by Molmil
Crystal structure of HIV protease model precursor/Darunavir complex
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, GLYCEROL, ...
Authors:Agniswamy, J, Sayer, J, Weber, I, Louis, J.
Deposit date:2011-08-29
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Terminal interface conformations modulate dimer stability prior to amino terminal autoprocessing of HIV-1 protease.
Biochemistry, 51, 2012
4I0C
DownloadVisualize
BU of 4i0c by Molmil
The structure of the camelid antibody cAbHuL5 in complex with human lysozyme
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:De Genst, E, Chan, P.H, Pardon, E, Kumita, J.R, Christodoulou, J, Menzer, L, Chirgadze, D.Y, Robinson, C.V, Muyldermans, S, Matagne, A, Wyns, L, Dobson, C.M, Dumoulin, M.
Deposit date:2012-11-16
Release date:2013-10-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A nanobody binding to non-amyloidogenic regions of the protein human lysozyme enhances partial unfolding but inhibits amyloid fibril formation.
J.Phys.Chem.B, 117, 2013
1M7T
DownloadVisualize
BU of 1m7t by Molmil
Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
Descriptor: Chimera of Human and E. coli thioredoxin
Authors:Dangi, B, Dobrodumov, A.V, Louis, J.M, Gronenborn, A.M.
Deposit date:2002-07-22
Release date:2002-09-25
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Human-Escherichia coli Thioredoxin Chimera: Insights into Thermodynamic Stability
Biochemistry, 41, 2002
3TKG
DownloadVisualize
BU of 3tkg by Molmil
crystal structure of HIV model protease precursor/saquinavir complex
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, GLYCEROL, ...
Authors:Agniswamy, J, Sayer, J, Weber, I, Louis, J.
Deposit date:2011-08-26
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Terminal interface conformations modulate dimer stability prior to amino terminal autoprocessing of HIV-1 protease.
Biochemistry, 51, 2012
2MK3
DownloadVisualize
BU of 2mk3 by Molmil
Solution NMR structure of gp41 ectodomain monomer on a DPC micelle
Descriptor: Transmembrane glycoprotein, chimeric construct
Authors:Roche, J, Louis, J.M, Grishaev, A, Ying, J, Bax, A.
Deposit date:2014-01-23
Release date:2014-02-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dissociation of the trimeric gp41 ectodomain at the lipid-water interface suggests an active role in HIV-1 Env-mediated membrane fusion.
Proc.Natl.Acad.Sci.USA, 111, 2014
2L2F
DownloadVisualize
BU of 2l2f by Molmil
NMR Structure of GzCVNH (Gibberella zeae CVNH)
Descriptor: Cyanovirin-N HOMOLOG
Authors:Matei, E, Louis, J.M, Jee, J.G, Gronenborn, A.M.
Deposit date:2010-08-17
Release date:2011-03-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR solution structure of a cyanovirin homolog from wheat head blight fungus.
Proteins, 79, 2011
2MEZ
DownloadVisualize
BU of 2mez by Molmil
Flexible anchoring of archaeal MBF1 on ribosomes suggests role as recruitment factor
Descriptor: Multiprotein Bridging Factor (MBP-like)
Authors:Launay, H, Blombarch, F, Camilloni, C, Vendruscolo, M, van des Oost, J, Christodoulou, J.
Deposit date:2013-10-03
Release date:2014-06-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Archaeal MBF1 binds to 30S and 70S ribosomes via its helix-turn-helix domain.
Biochem.J., 462, 2014
2LWA
DownloadVisualize
BU of 2lwa by Molmil
Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide
Descriptor: HEMAGGLUTININ FUSION PEPTIDE G8A MUTANT
Authors:Lorieau, J.L, Louis, J.M, Schwieters, C.D, Bax, A.
Deposit date:2012-07-26
Release date:2012-12-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR.
Proc.Natl.Acad.Sci.USA, 109, 2012
2KXA
DownloadVisualize
BU of 2kxa by Molmil
The hemagglutinin fusion peptide (H1 subtype) at pH 7.4
Descriptor: Haemagglutinin HA2 CHAIN PEPTIDE
Authors:Lorieau, J.L, Louis, J.M, Bax, A.
Deposit date:2010-04-29
Release date:2010-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The complete influenza hemagglutinin fusion domain adopts a tight helical hairpin arrangement at the lipid:water interface.
Proc.Natl.Acad.Sci.USA, 107, 2010
2N62
DownloadVisualize
BU of 2n62 by Molmil
ddFLN5+110
Descriptor: gelation factor, secretion monitor chimera
Authors:Cabrita, L.D, Cassaignau, A.M.E, Launay, H.M.M, Waudby, C.A, Camilloni, C, Robertson, A.L, Wang, X, Wlodarski, T, Wentink, A.S, Vendruscolo, M, Dobson, C.M, Christodoulou, J.
Deposit date:2015-08-10
Release date:2016-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A structural ensemble of a ribosome-nascent chain complex during cotranslational protein folding.
Nat.Struct.Mol.Biol., 23, 2016
2MZ8
DownloadVisualize
BU of 2mz8 by Molmil
Solution NMR structure of Salmonella Typhimurium transcriptional regulator protein Crl
Descriptor: Sigma factor-binding protein Crl
Authors:Cavaliere, P, Levi-Acobas, F, Monteil, V, Bellalou, J, Mayer, C, Norel, F, Sizun, C.
Deposit date:2015-02-07
Release date:2015-12-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Binding interface between the Salmonella sigma (S)/RpoS subunit of RNA polymerase and Crl: hints from bacterial species lacking crl.
Sci Rep, 5, 2015
2IEN
DownloadVisualize
BU of 2ien by Molmil
Crystal structure analysis of HIV-1 protease with a potent non-peptide inhibitor (UIC-94017)
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETIC ACID, CHLORIDE ION, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Manna, D, Hussain, A.K, Leshchenko, S, Ghosh, A.K, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High Resolution Crystal Structures of HIV-1 Protease with a Potent Non-Peptide Inhibitor (Uic-94017) Active Against Multi-Drug-Resistant Clinical Strains.
J.Mol.Biol., 338, 2004
2IDW
DownloadVisualize
BU of 2idw by Molmil
Crystal structure analysis of HIV-1 protease mutant V82A with a potent non-peptide inhibitor (UIC-94017)
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETIC ACID, CHLORIDE ION, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Manna, D, Hussain, A.K, Leshchenko, S, Ghosh, A.K, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2006-09-15
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High Resolution Crystal Structures of HIV-1 Protease with a Potent Non-Peptide Inhibitor (Uic-94017) Active Against Multi-Drug-Resistant Clinical Strains.
J.Mol.Biol., 338, 2004
2K0E
DownloadVisualize
BU of 2k0e by Molmil
A Coupled Equilibrium Shift Mechanism in Calmodulin-Mediated Signal Transduction
Descriptor: CALCIUM ION, Calmodulin
Authors:Gsponer, J, Christodoulou, J, Cavalli, A, Bui, J.M, Richter, B, Dobson, C.M, Vendruscolo, M.
Deposit date:2008-02-02
Release date:2008-06-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A coupled equilibrium shift mechanism in calmodulin-mediated signal transduction
Structure, 16, 2008
2K0F
DownloadVisualize
BU of 2k0f by Molmil
Calmodulin complexed with calmodulin-binding peptide from smooth muscle myosin light chain kinase
Descriptor: 19-mer peptide from Myosin light chain kinase, CALCIUM ION, calmodulin
Authors:Gsponer, J, Christodoulou, J, Cavalli, A, Bui, J.M, Richter, B, Dobson, C.M, Vendruscolo, M.
Deposit date:2008-02-02
Release date:2008-06-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A coupled equilibrium shift mechanism in calmodulin-mediated signal transduction
Structure, 16, 2008
2IEO
DownloadVisualize
BU of 2ieo by Molmil
Crystal structure analysis of HIV-1 protease mutant I84V with a potent non-peptide inhibitor (UIC-94017)
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, Protease, ...
Authors:Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Manna, D, Hussain, A.K, Leshchenko, S, Ghosh, A.K, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:High Resolution Crystal Structures of HIV-1 Protease with a Potent Non-Peptide Inhibitor (Uic-94017) Active Against Multi-Drug-Resistant Clinical Strains.
J.Mol.Biol., 338, 2004

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon