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PDB: 78 results

2CMP
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BU of 2cmp by Molmil
crystal structure of the DNA binding domain of G1P SMALL TERMINASE SUBUNIT from bacteriophage SF6
Descriptor: TERMINASE SMALL SUBUNIT
Authors:Benini, S, Chechik, M, Ortiz-Lombardia, M, Polier, S, Shevtsov, M.B, DeLuchi, D, Alonso, J.C, Antson, A.A.
Deposit date:2006-05-11
Release date:2007-05-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The 1.58 A Resolution Structure of the DNA-Binding Domain of Bacteriophage Sf6 Small Terminase Provides New Hints on DNA Binding
Acta Crystallogr.,Sect.F, 69, 2013
2JEX
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Transcription activator structure reveals redox control of a replication initiation reaction
Descriptor: REGULATORY PROTEIN E2
Authors:Sanders, C.M, Sizov, D, Seavers, P.R, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2007-01-24
Release date:2007-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Transcription Activator Structure Reveals Redox Control of a Replication Initiation Reaction.
Nucleic Acids Res., 35, 2007
2JEU
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Transcription activator structure reveals redox control of a replication initiation reaction
Descriptor: REGULATORY PROTEIN E2
Authors:Sanders, C.M, Sizov, D, Seavers, P.R, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2007-01-23
Release date:2007-05-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Transcription Activator Structure Reveals Redox Control of a Replication Initiation Reaction.
Nucleic Acids Res., 35, 2007
3UH8
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N-terminal domain of phage TP901-1 ORF48
Descriptor: ORF48
Authors:Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
Deposit date:2011-11-03
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
6NPF
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BU of 6npf by Molmil
Structure of E.coli enolase in complex with an analog of the natural product SF-2312 metabolite.
Descriptor: Enolase, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Erlandsen, H, Krucinska, J, Lombardo, M, Wright, D.
Deposit date:2019-01-17
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Functional and structural basis of E. coli enolase inhibition by SF2312: a mimic of the carbanion intermediate.
Sci Rep, 9, 2019
3RX9
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3D structure of SciN from an Escherichia coli Patotype
Descriptor: Putative uncharacterized protein, SULFATE ION
Authors:Felisberto-Rodrigues, C, Durand, E, Aschtgen, M.-S, Blangy, S, Ortiz-Lombardia, M, Douzy, B, Cambillau, C, Cascales, E.
Deposit date:2011-05-10
Release date:2011-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Towards a Structural Comprehension of Bacterial Type VI Secretion Systems: Characterization of the TssJ-TssM Complex of an Escherichia coli Pathovar.
Plos Pathog., 7, 2011
2WBM
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Crystal structure of mthSBDS, the homologue of the Shwachman-Bodian- Diamond syndrome protein in the euriarchaeon Methanothermobacter thermautotrophicus
Descriptor: CHLORIDE ION, GLYCEROL, RIBOSOME MATURATION PROTEIN SDO1 HOMOLOG, ...
Authors:Ng, C.L, Isupov, M.N, Lebedev, A.A, Ortiz-Lombardia, M, Antson, A.A.
Deposit date:2009-03-02
Release date:2009-06-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Conformational Flexibility and Molecular Interactions of an Archaeal Homologue of the Shwachman-Bodian-Diamond Syndrome Protein.
Bmc Struct.Biol., 9, 2009
2X53
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Structure of the phage p2 baseplate in its activated conformation with Sr
Descriptor: ORF15, ORF16, PUTATIVE RECEPTOR BINDING PROTEIN, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2010-02-05
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
4AUV
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Crystal Structure of the BRMS1 N-terminal region
Descriptor: ACETIC ACID, BREAST CANCER METASTASIS SUPPRESSOR 1, CHLORIDE ION, ...
Authors:Spinola-Amilibia, M, Rivera, J, Ortiz-Lombardia, M, Romero, A, Neira, J.L, Bravo, J.
Deposit date:2012-05-22
Release date:2013-03-20
Last modified:2019-11-06
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Brms151-98 and Brms151-84 are Crystal Oligomeric Coiled Coils with Different Oligomerization States, which Behave as Disordered Protein Fragments in Solution.
J.Mol.Biol., 425, 2013
1W94
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Crystal Structure of Mil (Mth680), an archaeal Imp4-like protein
Descriptor: PROBABLE BRIX-DOMAIN RIBOSOMAL BIOGENESIS PROTEIN
Authors:Ng, C.L, Antson, A.A, Ortiz-Lombardia, M.
Deposit date:2004-10-06
Release date:2005-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Mil (Mth680): Internal Duplication and Similarity between the Imp4/Brix Domain and the Anticodon-Binding Domain of Class Iia Aminoacyl-tRNA Synthetases
Embo Rep., 6, 2005
3ZQN
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Crystal structure of the small terminase oligomerization core domain from a SPP1-like bacteriophage (crystal form 2)
Descriptor: TERMINASE SMALL SUBUNIT
Authors:Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A.
Deposit date:2011-06-10
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor.
Proc.Natl.Acad.Sci.USA, 109, 2012
1UYW
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Crystal Structure of the antiflavivirus Fab4g2
Descriptor: FAB ANTIBODY HEAVY CHAIN, FAB ANTIBODY LIGHT CHAIN
Authors:Martinez-Fleites, C, Ortiz-Lombardia, M, Taylor, E.J, Gil-Valdes, J, Chinea, G, Davies, G.
Deposit date:2004-03-03
Release date:2005-03-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Antiflavivirus Fab4G2
To be Published
2XYV
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Crystal structure of the nsp16 nsp10 SARS coronavirus complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, NON-STRUCTURAL PROTEIN 10, ...
Authors:Decroly, E, Debarnot, C, Ferron, F, Bouvet, M, Coutard, B, Imbert, I, Gluais, L, Papageorgiou, N, Ortiz-Lombardia, M, Lescar, J, Canard, B.
Deposit date:2010-11-19
Release date:2011-10-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structure and Functional Analysis of the Sars-Coronavirus RNA CAP 2'-O-Methyltransferase Nsp10/Nsp16 Complex.
Plos Pathog., 7, 2011
3ZQO
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BU of 3zqo by Molmil
Crystal structure of the small terminase oligomerization core domain from a SPP1-like bacteriophage (crystal form 3)
Descriptor: POTASSIUM ION, TERMINASE SMALL SUBUNIT
Authors:Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A.
Deposit date:2011-06-10
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor.
Proc.Natl.Acad.Sci.USA, 109, 2012
4CYC
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BU of 4cyc by Molmil
CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS
Descriptor: 5'-D(*AP*CP*GP*TP*GP*AP*TP*TP*TP*AP*TP*GP*GP*CP*GP)-3', 5'-D(*GP*TP*CP*GP*CP*CP*AP*TP*AP*AP*AP*TP*CP*AP*CP)-3', HOMEOBOX PROTEIN EXTRADENTICLE, ...
Authors:Foos, N, Mate, M.J, Ortiz-Lombardia, M.
Deposit date:2014-04-10
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Flexible Extension of the Drosophila Ultrabithorax Homeodomain Defines a Novel Hox/Pbc Interaction Mode.
Structure, 23, 2015
3ZQQ
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Crystal structure of the full-length small terminase from a SPP1-like bacteriophage
Descriptor: TERMINASE SMALL SUBUNIT
Authors:Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A.
Deposit date:2011-06-10
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor.
Proc.Natl.Acad.Sci.USA, 109, 2012
2XUS
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BU of 2xus by Molmil
Crystal Structure of the BRMS1 N-terminal region
Descriptor: BREAST CANCER METASTASIS-SUPPRESSOR 1, CHLORIDE ION, SULFATE ION
Authors:Spinola-Amilibia, M, Rivera, J, Ortiz-Lombardia, M, Romero, A, Neira, J.L, Bravo, J.
Deposit date:2010-10-20
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:The Structure of Brms1 Nuclear Export Signal and Snx6 Interacting Region Reveals a Hexamer Formed by Antiparallel Coiled Coils.
J.Mol.Biol., 411, 2011
2XYR
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BU of 2xyr by Molmil
Crystal structure of the nsp16 nsp10 SARS coronavirus complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, NON-STRUCTURAL PROTEIN 10, ...
Authors:Decroly, E, Debarnot, C, Ferron, F, Bouvet, M, Coutard, B, Imbert, I, Gluais, L, Papageorgiou, N, Ortiz-Lombardia, M, Lescar, J, Canard, B.
Deposit date:2010-11-18
Release date:2011-10-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Functional Analysis of the Sars-Coronavirus RNA CAP 2'-O-Methyltransferase Nsp10/Nsp16 Complex.
Plos Pathog., 7, 2011
3ZQP
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BU of 3zqp by Molmil
Crystal structure of the small terminase oligomerization domain from a SPP1-like bacteriophage
Descriptor: TERMINASE SMALL SUBUNIT
Authors:Buttner, C.R, Chechik, M, Ortiz-Lombardia, M, Smits, C, Chechik, V, Jeschke, G, Dykeman, E, Benini, S, Alonso, J.C, Antson, A.A.
Deposit date:2011-06-10
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for DNA Recognition and Loading Into a Viral Packaging Motor.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ZVK
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Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their promoter
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANTITOXIN OF TOXIN-ANTITOXIN SYSTEM VAPB, DNA, ...
Authors:Mate, M.J, Ortiz-Lombardia, M, Cambillau, C.
Deposit date:2011-07-25
Release date:2011-12-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the DNA-Bound Vapbc2 Antitoxin/Toxin Pair from Rickettsia Felis.
Nucleic Acids Res., 40, 2012
2WZP
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Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae
Descriptor: CAMELID VHH5, LACTOCOCCAL PHAGE P2 ORF15, LACTOCOCCAL PHAGE P2 ORF16, ...
Authors:Sciara, G, Bebeacua, C, Bron, P, Tremblay, D, Ortiz-Lombardia, M, Lichiere, J, van Heel, M, Campanacci, V, Moineau, S, Cambillau, C.
Deposit date:2009-12-01
Release date:2010-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Lactococcal Phage P2 Baseplate and its Mechanism of Activation.
Proc.Natl.Acad.Sci.USA, 107, 2010
467D
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The structure of a decamer forming a four-way junction
Descriptor: DNA (5'-D(*CP*CP*GP*GP*GP*AP*CP*CP*GP*G)-3')
Authors:Ortiz-Lombardia, M, Coll, M.
Deposit date:1999-04-22
Release date:2000-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of a DNA Holliday junction
Nat.Struct.Biol., 6, 1999
2WKC
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Crystal structure from a single-stranded DNA binding protein from the lactococcal phage p2
Descriptor: ORF34P2
Authors:Scaltriti, E, Cambillau, C, Ortiz-Lombardia, M.
Deposit date:2009-06-09
Release date:2009-09-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and Function of Phage P2 Orf34(P2), a New Type of Single-Stranded DNA Binding Protein.
Mol.Microbiol., 73, 2009
5M5B
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Crystal structure of Zika virus NS5 methyltransferase
Descriptor: CHLORIDE ION, GLYCEROL, NS5 methyltransferase, ...
Authors:Barral, K, Ortiz Lombardia, M, Coutard, B, Decroly, E, Lichiere, J.
Deposit date:2016-10-21
Release date:2016-12-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Zika Virus Methyltransferase: Structure and Functions for Drug Design Perspectives.
J. Virol., 91, 2017
2XYQ
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Crystal structure of the nsp16 nsp10 SARS coronavirus complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, NON-STRUCTURAL PROTEIN 10, ...
Authors:Decroly, E, Debarnot, C, Ferron, F, Bouvet, M, Coutard, B, Imbert, I, Gluais, L, Papageorgiou, N, Ortiz-Lombardia, M, Lescar, J, Canard, B.
Deposit date:2010-11-18
Release date:2011-10-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure and Functional Analysis of the Sars-Coronavirus RNA CAP 2'-O-Methyltransferase Nsp10/Nsp16 Complex.
Plos Pathog., 7, 2011

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