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PDB: 666 件

4GZN
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Mouse ZFP57 zinc fingers in complex with methylated DNA
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Liu, Y, Zhang, X, Cheng, X.
登録日2012-09-06
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.99 Å)
主引用文献An atomic model of Zfp57 recognition of CpG methylation within a specific DNA sequence.
Genes Dev., 26, 2012
3MI2
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BU of 3mi2 by Molmil
Crystal structure of human orotidine-5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
分子名称: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, Uridine 5'-monophosphate synthase
著者Liu, Y, To, T, Kotra, L.P, Pai, E.F.
登録日2010-04-09
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural determinants for the inhibitory ligands of orotidine-5'-monophosphate decarboxylase.
Bioorg.Med.Chem., 18, 2010
3SEC
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Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
分子名称: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2011-06-10
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of methanococcus thermolithotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
To be Published
3MW7
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BU of 3mw7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP)
分子名称: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-05-05
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP)
To be Published
3MO7
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BU of 3mo7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP
分子名称: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), GLYCEROL, Uridine 5'-monophosphate synthase
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-04-22
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Novel interactions of fluorinated nucleotide derivatives targeting orotidine 5'-monophosphate decarboxylase.
J.Med.Chem., 54, 2011
3N3M
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BU of 3n3m by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
分子名称: 1,2-ETHANEDIOL, 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-05-20
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
To be Published
3N2M
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BU of 3n2m by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-05-18
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
To be Published
3N34
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BU of 3n34 by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP, produced from 5-fluoro-6-azido-UMP
分子名称: 1,2-ETHANEDIOL, 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-05-19
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP, produced from 5-fluoro-6-azido-UMP
To be Published
3MWA
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BU of 3mwa by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase covalently modified by 2-prime-fluoro-6-iodo-UMP
分子名称: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, Orotidine 5'-phosphate decarboxylase, ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2010-05-05
公開日2011-04-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase covalently modified by 2-prime-fluoro-6-iodo-UMP
To be Published
4RGY
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BU of 4rgy by Molmil
Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library
分子名称: Esterase
著者Liu, Y.
登録日2014-10-01
公開日2015-09-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library.
J Ind Microbiol Biotechnol, 42, 2015
8CVY
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BU of 8cvy by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the apo mobile state
分子名称: Glycogen [starch] synthase, muscle, Glycogenin-1
著者Liu, Y, Fastman, N.M, Tzitzilonis, C.
登録日2022-05-18
公開日2022-07-13
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
8CVX
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BU of 8cvx by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the presence of glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
著者Liu, Y, Fastman, N.M, Tzitzilonis, C.
登録日2022-05-18
公開日2022-07-13
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
8CVZ
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BU of 8cvz by Molmil
Human glycogenin-1 and glycogen synthase-1 complex in the apo ordered state
分子名称: Glycogen [starch] synthase, muscle, Glycogenin-1
著者Liu, Y, Fastman, N.M, Tzitzilonis, C.
登録日2022-05-18
公開日2022-07-13
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献The structural mechanism of human glycogen synthesis by the GYS1-GYG1 complex.
Cell Rep, 40, 2022
8DWC
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BU of 8dwc by Molmil
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
分子名称: Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Liu, Y, Cao, C, Fay, J.F, Roth, B.L.
登録日2022-08-01
公開日2022-11-02
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Ligand recognition and allosteric modulation of the human MRGPRX1 receptor.
Nat.Chem.Biol., 19, 2023
8DWH
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BU of 8dwh by Molmil
CryoEM structure of Gq-coupled MRGPRX1 with ligand Compound-16
分子名称: Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Liu, Y, Cao, C, Fay, J.F, Roth, B.L.
登録日2022-08-01
公開日2022-11-02
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Ligand recognition and allosteric modulation of the human MRGPRX1 receptor.
Nat.Chem.Biol., 19, 2023
8DWG
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BU of 8dwg by Molmil
CryoEM structure of Gq-coupled MRGPRX1 with peptide ligand BAM8-22 and positive allosteric modulator ML382
分子名称: 2-[(cyclopropanesulfonyl)amino]-N-(2-ethoxyphenyl)benzamide, Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Liu, Y, Cao, C, Fay, J.F, Roth, B.L.
登録日2022-08-01
公開日2022-11-02
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Ligand recognition and allosteric modulation of the human MRGPRX1 receptor.
Nat.Chem.Biol., 19, 2023
2EAW
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BU of 2eaw by Molmil
Human UMP Synthase (C-terminal Domain- Orotidine 5'-Monophosphate Decarboxylase)
分子名称: SULFATE ION, Uridine 5'-monophosphate synthase
著者Liu, Y, Tang, H.L, Pai, E.F.
登録日2007-02-03
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Human UMP Synthase (C-terminal Domain - Orotidine 5'-Monophosphate Decarboxylase)
TO BE PUBLISHED
2AZP
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BU of 2azp by Molmil
Crystal Structure of PA1268 Solved by Sulfur SAD
分子名称: hypothetical protein PA1268
著者Liu, Y, Gorodichtchenskaia, E, Skarina, T, Yang, C, Joachimiak, A, Edwards, A, Pai, E.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-09-12
公開日2005-12-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal Structure of PA1268 Solved by Sulfur SAD
To be Published
2AJI
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BU of 2aji by Molmil
Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase complexes with isoleucine
分子名称: ISOLEUCINE, Leucyl-tRNA synthetase
著者Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J.
登録日2005-08-02
公開日2006-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination
Biochem.J., 394, 2006
2AJG
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BU of 2ajg by Molmil
Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase
分子名称: Leucyl-tRNA synthetase
著者Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J.
登録日2005-08-01
公開日2006-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination
Biochem.J., 394, 2006
2AJH
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BU of 2ajh by Molmil
Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase complexes with methionine
分子名称: Leucyl-tRNA synthetase, METHIONINE
著者Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J.
登録日2005-08-02
公開日2006-01-24
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination
Biochem.J., 394, 2006
2ESH
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BU of 2esh by Molmil
Crystal Structure of Conserved Protein of Unknown Function TM0937- a Potential Transcriptional Factor
分子名称: CALCIUM ION, conserved hypothetical protein TM0937
著者Liu, Y, Bochkareva, E, Zheng, H, Xu, X, Nocek, B, Lunin, V, Edward, A, Pai, E.F, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-10-26
公開日2005-12-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Conserved Hypothetical Protein TM0937
To be Published
4Z0O
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CW-type zinc finger of ZCWPW2 with F78D mutation
分子名称: SODIUM ION, UNKNOWN ATOM OR ION, ZINC ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献CW-type zinc finger of ZCWPW2 with F78D mutation
To be Published
4Z0R
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Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
分子名称: 1,2-ETHANEDIOL, Histone H3.1, SULFATE ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
To be Published
4ZK7
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Crystal structure of rescued two-component self-assembling tetrahedral cage T33-31
分子名称: Chorismate mutase, Divalent-cation tolerance protein CutA
著者Liu, Y, Cascio, D, Sawaya, M.R, Bale, J, Collazo, M.J, Park, R, King, N, Baker, D, Yeates, T.
登録日2015-04-30
公開日2015-07-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure of a designed tetrahedral protein assembly variant engineered to have improved soluble expression.
Protein Sci., 24, 2015

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