Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 49 results

6LQE
DownloadVisualize
BU of 6lqe by Molmil
Crystal structure of Arabidopsis ARID5 PHD finger in complex with H3K4me3 peptide
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, ZINC ION
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
6LQF
DownloadVisualize
BU of 6lqf by Molmil
Crystal structure of Arabidopsis ARID5 ARID-PHD cassette in complex with H3K4me3 peptide and DNA
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, DNA (5'-D(*TP*TP*TP*AP*GP*AP*TP*CP*TP*AP*AP*A)-3'), ...
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
1QS9
DownloadVisualize
BU of 1qs9 by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-25
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTD
DownloadVisualize
BU of 1qtd by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-27
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QS5
DownloadVisualize
BU of 1qs5 by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-25
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QSB
DownloadVisualize
BU of 1qsb by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-20
Release date:1999-07-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTH
DownloadVisualize
BU of 1qth by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-28
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTC
DownloadVisualize
BU of 1qtc by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-26
Release date:1999-07-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1QTB
DownloadVisualize
BU of 1qtb by Molmil
THE INTRODUCTION OF STRAIN AND ITS EFFECTS ON THE STRUCTURE AND STABILITY OF T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, LYSOZYME
Authors:Liu, R, Baase, W.A, Matthews, B.W.
Deposit date:1999-06-26
Release date:1999-07-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The introduction of strain and its effects on the structure and stability of T4 lysozyme.
J.Mol.Biol., 295, 2000
1XZ1
DownloadVisualize
BU of 1xz1 by Molmil
Complex of halothane with apoferritin
Descriptor: 2-BROMO-2-CHLORO-1,1,1-TRIFLUOROETHANE, CADMIUM ION, Ferritin light chain
Authors:Liu, R, Loll, P.J, Eckenhoff, R.G.
Deposit date:2004-11-11
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein.
Faseb J., 19, 2005
1XZ3
DownloadVisualize
BU of 1xz3 by Molmil
Complex of apoferritin with isoflurane
Descriptor: 1-CHLORO-2,2,2-TRIFLUOROETHYL DIFLUOROMETHYL ETHER, CADMIUM ION, Ferritin light chain
Authors:Liu, R, Loll, P.J, Eckenhoff, R.G.
Deposit date:2004-11-11
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein.
Faseb J., 19, 2005
3NDP
DownloadVisualize
BU of 3ndp by Molmil
Crystal structure of human AK4(L171P)
Descriptor: Adenylate kinase isoenzyme 4, SULFATE ION
Authors:Liu, R, Wang, Y, Wei, Z, Gong, W.
Deposit date:2010-06-07
Release date:2010-06-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion
Biochem.Biophys.Res.Commun., 379, 2009
5YXI
DownloadVisualize
BU of 5yxi by Molmil
Designed protein dRafX6
Descriptor: Designed protein dRafX6
Authors:Liu, R.
Deposit date:2017-12-05
Release date:2018-12-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo sequence redesign of a functional Ras-binding domain globally inverted the surface charge distribution and led to extreme thermostability.
Biotechnol.Bioeng., 118, 2021
3U90
DownloadVisualize
BU of 3u90 by Molmil
apoferritin: complex with SDS
Descriptor: CADMIUM ION, DODECYL SULFATE, Ferritin light chain
Authors:Liu, R, Bu, W, Xi, J, Mortazavi, S.R, Cheung-Lau, J.C, Dmochowski, I.J, Loll, P.J.
Deposit date:2011-10-17
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beyond the detergent effect: a binding site for sodium dodecyl sulfate (SDS) in mammalian apoferritin.
Acta Crystallogr.,Sect.D, 68, 2012
7VSQ
DownloadVisualize
BU of 7vsq by Molmil
Crystal strcuture of the tandem B-Box domains of CONSTANS
Descriptor: ZINC ION, Zinc finger protein CONSTANS
Authors:Liu, R, Lv, X, Du, J.
Deposit date:2021-10-27
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of CONSTANS oligomerization in FLOWERING LOCUS T activation.
J Integr Plant Biol, 64, 2022
8IM0
DownloadVisualize
BU of 8im0 by Molmil
mCherry-LaM8 complex
Descriptor: LaM8, MCherry fluorescent protein
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8ILX
DownloadVisualize
BU of 8ilx by Molmil
mCherry-LaM3 complex
Descriptor: LAM3, MCherry fluorescent protein
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8IM1
DownloadVisualize
BU of 8im1 by Molmil
mCherry-LaM1 complex
Descriptor: LaM1, MCherry fluorescent protein, SULFATE ION
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
4H48
DownloadVisualize
BU of 4h48 by Molmil
1.45 angstrom CyPet Structure at pH7.0
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein
Authors:Hu, X.-J, Liu, R.
Deposit date:2012-09-17
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure insight of the fluorescent state of CyPet
To be Published
6LMJ
DownloadVisualize
BU of 6lmj by Molmil
ASFV pA104R in complex with double-strand DNA
Descriptor: A104R, DNA (5'-D(*TP*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*A)-3')
Authors:Wang, H, Qi, J, Chai, Y, Gao, F, Liu, R.
Deposit date:2019-12-25
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The structural basis of African swine fever virus pA104R binding to DNA and its inhibition by stilbene derivatives.
Proc.Natl.Acad.Sci.USA, 117, 2020
7D9R
DownloadVisualize
BU of 7d9r by Molmil
Structure of huamn soluble guanylate cyclase in the riociguat and NO-bound state
Descriptor: Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1, MAGNESIUM ION, ...
Authors:Chen, L, Liu, R, Kang, Y.
Deposit date:2020-10-14
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Activation mechanism of human soluble guanylate cyclase by stimulators and activators.
Nat Commun, 12, 2021
7D9U
DownloadVisualize
BU of 7d9u by Molmil
Structure of human soluble guanylate cyclase in the cinciguat-bound activated state
Descriptor: 4-({(4-carboxybutyl)[2-(2-{[4-(2-phenylethyl)benzyl]oxy}phenyl)ethyl]amino}methyl)benzoic acid, Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1, ...
Authors:Chen, L, Liu, R, Kang, Y.
Deposit date:2020-10-14
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Activation mechanism of human soluble guanylate cyclase by stimulators and activators.
Nat Commun, 12, 2021
7D9S
DownloadVisualize
BU of 7d9s by Molmil
Structure of huamn soluble guanylate cyclase in the YC1 and NO-bound state
Descriptor: Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1, MAGNESIUM ION, ...
Authors:Chen, L, Liu, R, Kang, Y.
Deposit date:2020-10-14
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Activation mechanism of human soluble guanylate cyclase by stimulators and activators.
Nat Commun, 12, 2021
7D9T
DownloadVisualize
BU of 7d9t by Molmil
Structure of human soluble guanylate cyclase in the cinciguat-bound inactive state
Descriptor: 4-({(4-carboxybutyl)[2-(2-{[4-(2-phenylethyl)benzyl]oxy}phenyl)ethyl]amino}methyl)benzoic acid, Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1
Authors:Chen, L, Liu, R, Kang, Y.
Deposit date:2020-10-14
Release date:2021-08-11
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Activation mechanism of human soluble guanylate cyclase by stimulators and activators.
Nat Commun, 12, 2021
8XN7
DownloadVisualize
BU of 8xn7 by Molmil
Crystal structure of HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with compound 9f
Descriptor: 5-amino-2-((6-methoxy-2-methyl-1,2,3,4-tetrahydroisoquinolin-7-yl)amino)-8-(2-(trifluoromethyl)benzyl)pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase kinase kinase kinase 1
Authors:Huang, W.X, Liu, R, Ding, K.
Deposit date:2023-12-29
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery of 5-aminopyrido[2,3-d]pyrimidin-7(8H)-one derivatives as new hematopoietic progenitor kinase 1 (HPK1) inhibitors.
Eur.J.Med.Chem., 269, 2024

 

12>

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon