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PDB: 81 results

8HID
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BU of 8hid by Molmil
HUMAN ERYTHROCYTE CATALSE COMPLEXED WITH BT-Br
Descriptor: (~{S})-azanyl-[2-[[3-bromanyl-4-(diethylamino)phenyl]methyl]hydrazinyl]methanethiol, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, H.-Y, Yang, G.-F.
Deposit date:2022-11-19
Release date:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A catalase inhibitor: Targeting the NADPH-binding site for castration-resistant prostate cancer therapy.
Redox Biol, 63, 2023
6LD0
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BU of 6ld0 by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-hexyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LDB
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BU of 6ldb by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LD6
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BU of 6ld6 by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase
Descriptor: LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LEG
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BU of 6leg by Molmil
Structure of E. coli beta-glucuronidase complex with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Beta-D-glucuronidase
Authors:Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
Deposit date:2019-11-25
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LEM
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BU of 6lem by Molmil
Structure of E. coli beta-glucuronidase complex with C6-nonyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-nonyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, Beta-D-glucuronidase
Authors:Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
Deposit date:2019-11-25
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.188 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LDD
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BU of 6ldd by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-propyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.205 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LEJ
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BU of 6lej by Molmil
Structure of E. coli beta-glucuronidase complex with C6-propyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, Beta-D-glucuronidase
Authors:Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
Deposit date:2019-11-25
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.617 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LEL
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BU of 6lel by Molmil
Structure of E. coli beta-glucuronidase complex with C6-hexyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-hexyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, Beta-D-glucuronidase
Authors:Lin, H.-Y, Kuo, Y.-H, Lin, C.-H.
Deposit date:2019-11-25
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6LDC
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BU of 6ldc by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with C6-nonyl uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-2-nonyl-4,5-bis(oxidanyl)piperidine-3-carboxylic acid, LacZ1 Beta-galactosidase
Authors:Lin, H.-Y, Hsieh, T.-J, Lin, C.-H.
Deposit date:2019-11-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.181 Å)
Cite:Entropy-driven binding of gut bacterial beta-glucuronidase inhibitors ameliorates irinotecan-induced toxicity.
Commun Biol, 4, 2021
6M6D
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BU of 6m6d by Molmil
Structure of HPPD complexed with a synthesized inhibitor
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(3-trimethylsilylprop-2-ynyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Yang, W.-C, Yang, G.-F.
Deposit date:2020-03-14
Release date:2021-03-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021
8J8W
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BU of 8j8w by Molmil
Crystal structure of AtHPPD-Y19788 complex
Descriptor: 2,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazolin-4-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-05-02
Release date:2024-05-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal structure of AtHPPD-Y19788 complex
To Be Published
8J8X
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BU of 8j8x by Molmil
Crystal structure of AtHPPD-YH20307 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 5-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,4-dimethyl-3-propan-2-yl-benzimidazol-2-one, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-05-02
Release date:2024-05-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Crystal structure of AtHPPD-YH20307 complex
To Be Published
8X6Q
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BU of 8x6q by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F complexed with 2-acetyl-cyclohexane-2,4-dione
Descriptor: 2-OXOGLUTARIC ACID, 2-ethanoyl-3-oxidanyl-cyclohex-2-en-1-one, COBALT (II) ION, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-21
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7D
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BU of 8x7d by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, HPPD Inhibitor Sensitive 1-like 1 protein
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X74
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BU of 8x74 by Molmil
Crystal structure of ZmHSL1A complexed with mesotrione
Descriptor: 2-OXOGLUTARIC ACID, 2-[(4-methylsulfonyl-2-nitro-phenyl)-oxidanyl-methylidene]cyclohexane-1,3-dione, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-22
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7C
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BU of 8x7c by Molmil
Crystal structure of ZmHSL1A
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8JBW
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BU of 8jbw by Molmil
Crystal structure of ZtHPPD-(+)-Usnic acid complex
Descriptor: (9bR)-2,6-diethanoyl-8,9b-dimethyl-3,7,9-tris(oxidanyl)dibenzofuran-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-05-09
Release date:2024-04-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery and Development of 4-Hydroxyphenylpyruvate Dioxygenase as a Novel Crop Fungicide Target.
J.Agric.Food Chem., 71, 2023
7XVH
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BU of 7xvh by Molmil
Crystal structure of AtHPPD-Y13287 complex
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-05-23
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
7X7L
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BU of 7x7l by Molmil
Crystal structure of ZmHPPD-Y13161 complex
Descriptor: 3-(2,6-dimethylphenyl)-1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-09
Release date:2022-06-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7X5S
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BU of 7x5s by Molmil
Crystal structure of AtHPPD-Y14157 complex
Descriptor: 2-methyl-4-(2-nitro-4-piperidin-1-yl-phenyl)carbonyl-5-phenyl-1H-pyrazol-3-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-05
Release date:2022-06-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7X5X
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BU of 7x5x by Molmil
Crystal structure of AtHPPD-YH20533 complex
Descriptor: 2-methylsulfonyl-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-4-(trifluoromethyl)benzamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-05
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7X5W
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BU of 7x5w by Molmil
Crystal structure of AtHPPD-Y18022 complex
Descriptor: 1,5-dimethyl-3-naphthalen-1-yl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-05
Release date:2022-06-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.598 Å)
Cite:Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
7X5Y
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BU of 7x5y by Molmil
Crystal structure of AtHPPD-Y14240 complex
Descriptor: (1R,3S)-5-methyl-2-[(1S)-2-naphthalen-1-yloxy-1-oxidanyl-ethyl]cyclohexane-1,3-diol, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxyphenylpyruvate dioxygenase, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-05
Release date:2022-06-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.498 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
7X67
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BU of 7x67 by Molmil
Crystal structure of AtHPPD-Y18406 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(3-phenylpropyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2022-03-06
Release date:2022-06-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023

 

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