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PDB: 303 件

2AF4
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Phosphotransacetylase from Methanosarcina thermophila co-crystallized with coenzyme A
分子名称: COENZYME A, Phosphate acetyltransferase
著者Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
登録日2005-07-25
公開日2006-01-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.147 Å)
主引用文献Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
3CMM
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BU of 3cmm by Molmil
Crystal Structure of the Uba1-Ubiquitin Complex
分子名称: PROLINE, Ubiquitin, Ubiquitin-activating enzyme E1 1
著者Lee, I, Schindelin, H.
登録日2008-03-23
公開日2008-08-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes.
Cell(Cambridge,Mass.), 134, 2008
3BOA
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BU of 3boa by Molmil
Crystal structure of yeast protein disulfide isomerase.
分子名称: Protein disulfide-isomerase
著者Tian, G, Lennarz, W.J, Schindelin, H.
登録日2007-12-17
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The Catalytic Activity of Protein-disulfide Isomerase Requires a Conformationally Flexible Molecule.
J.Biol.Chem., 283, 2008
2AF3
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Phosphotransacetylase from Methanosarcina thermophila soaked with Coenzyme A
分子名称: COENZYME A, Phosphate acetyltransferase, SULFATE ION
著者Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
登録日2005-07-25
公開日2006-01-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
2GD5
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BU of 2gd5 by Molmil
Structural basis for budding by the ESCRTIII factor CHMP3
分子名称: Charged multivesicular body protein 3
著者Muziol, T.M, Pineda-Molina, E, Ravelli, R.B, Zamborlini, A, Usami, Y, Gottlinger, H, Weissenhorn, W.
登録日2006-03-15
公開日2006-06-13
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Budding by the ESCRT-III Factor CHMP3.
Dev.Cell, 10, 2006
3TIW
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BU of 3tiw by Molmil
Crystal structure of p97N in complex with the C-terminus of gp78
分子名称: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase
著者Haenzelmann, P, Schindelin, H.
登録日2011-08-22
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97.
J.Biol.Chem., 286, 2011
1JIZ
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BU of 1jiz by Molmil
Crystal Structure Analysis of human Macrophage Elastase MMP-12
分子名称: CALCIUM ION, N-HYDROXY-2(R)-[[(4-METHOXYPHENYL)SULFONYL](3-PICOLYL)AMINO]-3-METHYLBUTANAMIDE HYDROCHLORIDE, ZINC ION, ...
著者Nar, H, Werle, K, Bauer, M.M.T, Dollinger, H, Jung, B.
登録日2001-07-03
公開日2002-07-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human macrophage elastase (MMP-12) in complex with a hydroxamic acid inhibitor.
J.Mol.Biol., 312, 2001
2IBK
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Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
分子名称: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*AP*T)-3', ...
著者Bauer, J, Ling, H, Sayer, J.M, Xing, G, Yagi, H, Jerina, D.M.
登録日2006-09-11
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4BKM
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Crystal structure of the murine AUM (phosphoglycolate phosphatase) capping domain as a fusion protein with the catalytic core domain of murine chronophin (pyridoxal phosphate phosphatase)
分子名称: MAGNESIUM ION, NITRATE ION, PYRIDOXAL PHOSPHATE PHOSPHATASE, ...
著者Knobloch, G, Seifried, A, Gohla, A, Schindelin, H.
登録日2013-04-26
公開日2013-12-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Evolutionary and Structural Analyses of the Mammalian Haloacid Dehalogenase-Type Phosphatases Aum and Chronophin Provide Insight Into the Basis of Their Different Substrate Specificities.
J.Biol.Chem., 289, 2014
2QIE
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Staphylococcus aureus molybdopterin synthase in complex with precursor Z
分子名称: (2R,4AR,5AR,11AR,12AS)-8-AMINO-2-HYDROXY-4A,5A,9,11,11A,12A-HEXAHYDRO[1,3,2]DIOXAPHOSPHININO[4',5':5,6]PYRANO[3,2-G]PTERIDINE-10,12(4H,6H)-DIONE 2-OXIDE, Molybdopterin synthase small subunit, Molybdopterin-converting factor subunit 2
著者Daniels, J.N, Schindelin, H.
登録日2007-07-04
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency.
Biochemistry, 47, 2008
3PR5
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Dpo4 Y12A mutant incorporating ADP opposite template dT
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2010-11-29
公開日2011-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011
1ZRY
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BU of 1zry by Molmil
NMR structural analysis of apo chicken liver bile acid binding protein
分子名称: Fatty acid-binding protein, liver
著者Ragona, L, Catalano, M, Luppi, M, Cicero, D, Eliseo, T, Foote, J, Fogolari, F, Zetta, L, Molinari, H.
登録日2005-05-23
公開日2006-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR Dynamic Studies Suggest that Allosteric Activation Regulates Ligand Binding in Chicken Liver Bile Acid-binding Protein
J.Biol.Chem., 281, 2006
4BX3
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BU of 4bx3 by Molmil
Crystal Structure of murine Chronophin (Pyridoxal Phosphate Phosphatase)
分子名称: GLYCEROL, MAGNESIUM ION, PYRIDOXAL PHOSPHATE PHOSPHATASE
著者Knobloch, G, Gohla, A, Schindelin, H.
登録日2013-07-08
公開日2013-12-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Chronophin Dimerization is Required for Proper Positioning of its Substrate Specificity Loop.
J.Biol.Chem., 289, 2014
4BX0
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Crystal Structure of a Monomeric Variant of murine Chronophin (Pyridoxal Phosphate phosphatase)
分子名称: GLYCEROL, MAGNESIUM ION, PYRIDOXAL PHOSPHATE PHOSPHATASE
著者Kestler, C, Knobloch, G, Gohla, A, Schindelin, H.
登録日2013-07-08
公開日2013-12-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Chronophin Dimerization is Required for Proper Positioning of its Substrate Specificity Loop
J.Biol.Chem., 289, 2014
3Q8Q
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BU of 3q8q by Molmil
Human DNA polymerase iota incorporating dATP opposite 8-oxo-guanine
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.031 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
2PKO
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Crystal structure of yeast Urm1 at 1.8 A resolution
分子名称: Ubiquitin-related modifier 1
著者Lee, E.Y, Lake, M.W, Schindelin, H.
登録日2007-04-18
公開日2008-04-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The sulfurtransferase activity of Uba4 presents a link between ubiquitin-like protein conjugation and activation of sulfur carrier proteins.
Biochemistry, 47, 2008
3Q8S
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Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
分子名称: DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota, ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
To be Published
3QQ7
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Crystal Structure of the p97 N-terminal domain
分子名称: CHLORIDE ION, COBALT (II) ION, GLYCEROL, ...
著者Haenzelmann, P, Schindelin, H.
登録日2011-02-15
公開日2011-06-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
3Q8P
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Human DNA polymerase iota incorporating dCTP opposite 8-oxo-guanine
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
3Q8R
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Human DNA polymerase iota incorporating dGTP opposite 8-oxo-guanine
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
著者Kirouac, K.N, Ling, H.
登録日2011-01-06
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
2RDJ
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BU of 2rdj by Molmil
Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms
分子名称: CALCIUM ION, DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3'), DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), ...
著者Wong, J.H.Y, Ling, H.
登録日2007-09-24
公開日2008-06-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
J.Mol.Biol., 379, 2008
2Q5W
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The X-ray Crystal Structure of Molybdopterin Synthase from Staphylococcus aureus
分子名称: GLYCEROL, Molybdopterin converting factor, subunit 1, ...
著者Daniels, J.N, Schindelin, H.
登録日2007-06-03
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency.
Biochemistry, 47, 2008
4ABM
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Crystal Structure of CHMP4B hairpin
分子名称: CHARGED MULTIVESICULAR BODY PROTEIN 4B
著者Martinelli, N, Hartlieb, B, Usami, Y, Sabin, C, Dordor, A, Ribeiro, E.A, Gottlinger, H, Weissenhorn, W.
登録日2011-12-08
公開日2012-05-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Cc2D1A is a Regulator of Escrt-III Chmp4B.
J.Mol.Biol., 419, 2012
2HBB
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BU of 2hbb by Molmil
Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)
分子名称: 50S ribosomal protein L9, ZINC ION
著者Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
登録日2006-06-14
公開日2007-05-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3PR4
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Dpo4 Y12A mutant incorporating dADP opposite template dT
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
著者Kirouac, K.N, Suo, Z, Ling, H.
登録日2010-11-29
公開日2011-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011

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