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PDB: 491 results

5H9S
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Crystal Structure of Human Galectin-7 in Complex with TAZTDG
Descriptor: (2~{S},3~{R},4~{S},5~{R},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol, Galectin-7
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2015-12-29
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors
Sci Rep, 6, 2016
5H9R
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Crystal Structure of Human Galectin-3 CRD in Complex with TAZTDG
Descriptor: (2~{S},3~{R},4~{S},5~{R},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol, Galectin-3
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2015-12-29
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors
Sci Rep, 6, 2016
5H9P
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Crystal Structure of Human Galectin-3 CRD in Complex with TD139
Descriptor: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, Galectin-3
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2015-12-29
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors
Sci Rep, 6, 2016
6Q2Q
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Crystal structure of mouse viperin bound to uridine triphosphate and S-adenosylhomocysteine
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
Authors:Fenwick, M.K, Dong, M, Lin, H, Ealick, S.E.
Deposit date:2019-08-08
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Structural Basis of the Substrate Selectivity of Viperin.
Biochemistry, 59, 2020
6Q2E
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Crystal structure of Methanobrevibacter smithii Dph2 bound to 5'-methylthioadenosine
Descriptor: 2-(3-amino-3-carboxypropyl)histidine synthase, 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, ...
Authors:Fenwick, M.K, Dong, M, Lin, H, Ealick, S.E.
Deposit date:2019-08-07
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.768 Å)
Cite:The Crystal Structure of Dph2 in Complex with Elongation Factor 2 Reveals the Structural Basis for the First Step of Diphthamide Biosynthesis.
Biochemistry, 58, 2019
6Q2P
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Crystal structure of mouse viperin bound to cytidine triphosphate and S-adenosylhomocysteine
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Fenwick, M.K, Dong, M, Lin, H, Ealick, S.E.
Deposit date:2019-08-08
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:Structural Basis of the Substrate Selectivity of Viperin.
Biochemistry, 59, 2020
5H9Q
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Crystal Structure of Human Galectin-7 in Complex with TD139
Descriptor: 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-beta-D-galactopyranosyl 3-deoxy-3-[4-(3-fluorophenyl)-1H-1,2,3-triazol-1-yl]-1-thio-beta-D-galactopyranoside, Galectin-7
Authors:Hsieh, T.J, Lin, H.Y, Lin, C.H.
Deposit date:2015-12-29
Release date:2016-06-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.931 Å)
Cite:Dual thio-digalactoside-binding modes of human galectins as the structural basis for the design of potent and selective inhibitors
Sci Rep, 6, 2016
6Q2D
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Crystal structure of Methanobrevibacter smithii Dph2 in complex with Methanobrevibacter smithii elongation factor 2
Descriptor: 2-(3-amino-3-carboxypropyl)histidine synthase, Elongation factor 2, IRON/SULFUR CLUSTER
Authors:Fenwick, M.K, Dong, M, Lin, H, Ealick, S.E.
Deposit date:2019-08-07
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The Crystal Structure of Dph2 in Complex with Elongation Factor 2 Reveals the Structural Basis for the First Step of Diphthamide Biosynthesis.
Biochemistry, 58, 2019
5ANY
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BU of 5any by Molmil
Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265
Descriptor: E1, E2, FAB, ...
Authors:Fox, J.M, Long, F, Edeling, M.A, Lin, H, Duijl-Richter, M, Fong, R.H, Kahle, K.M, Smit, J.M, Jin, J, Simmons, G, Doranz, B.J, Crowe, J.E, Fremont, D.H, Rossmann, M.G, Diamond, M.S.
Deposit date:2015-09-08
Release date:2015-11-25
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (16.9 Å)
Cite:Broadly Neutralizing Alphavirus Antibodies Bind an Epitope on E2 and Inhibit Entry and Egress.
Cell(Cambridge,Mass.), 163, 2015
8IM3
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BU of 8im3 by Molmil
Crystal structure of human HPPD complexed with compound a10
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION, [1,3-diethyl-2,2-bis(oxidanylidene)-2$l^{6},1,3-benzothiadiazol-5-yl]-(1-methyl-5-oxidanyl-pyrazol-4-yl)methanone
Authors:Dong, J, Lin, H.-Y.
Deposit date:2023-03-05
Release date:2023-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023
3LZD
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BU of 3lzd by Molmil
Crystal structure of Dph2 from Pyrococcus horikoshii with 4Fe-4S cluster
Descriptor: Dph2, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Torelli, A.T, Zhang, Y, Zhu, X, Lee, M, Dzikovski, B, Koralewski, R.M, Wang, E, Freed, J, Krebs, C, Lin, H, Ealick, S.E.
Deposit date:2010-03-01
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
Nature, 465, 2010
5XGK
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BU of 5xgk by Molmil
Crystal structure of Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (AtHPPD) complexed with its substrate 4-hydroxyphenylpyruvate acid (HPPA)
Descriptor: (2S)-2-hydroxy-3-(4-hydroxyphenyl)propanoic acid, 4-hydroxyphenylpyruvate dioxygenase, ACETATE ION, ...
Authors:Yang, G.F, Yang, W.C, Lin, H.Y.
Deposit date:2017-04-14
Release date:2018-09-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of 4-Hydroxyphenylpyruvate Dioxygenase in Complex with Substrate Reveals a New Starting Point for Herbicide Discovery.
Res, 2019, 2019
3LZC
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BU of 3lzc by Molmil
Crystal structure of Dph2 from Pyrococcus horikoshii
Descriptor: Dph2
Authors:Zhang, Y, Zhu, X, Torelli, A.T, Lee, M, Dzikovski, B, Koralewski, R.M, Wang, E, Freed, J, Krebs, C, Lin, H, Ealick, S.E.
Deposit date:2010-03-01
Release date:2010-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
Nature, 465, 2010
6JJC
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BU of 6jjc by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) semi-empty VLP
Descriptor: CALCIUM ION, Capsid protein
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-05-01
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) semi-empty VLP
To Be Published
6JJA
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BU of 6jja by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii extra small virus (XSV) VLP
Descriptor: CALCIUM ION, Nucleocapsid protein CP17
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-07-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii extra small virus (XSV) VLP
To Be Published
6JJD
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BU of 6jjd by Molmil
Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) full VLP
Descriptor: CALCIUM ION, Capsid protein
Authors:Chang, W.H, Wang, C.H, Lin, H.H, Lin, S.Y, Chong, S.C, Wu, Y.Y.
Deposit date:2019-02-25
Release date:2019-05-01
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryo-EM structure of giant freshwater prawn Macrobrachium rosenbergii nodavirus (MrNV) full VLP
To Be Published
5GKB
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BU of 5gkb by Molmil
Crystal Structure of Fatty Acid-Binding Protein in Brain Tissue of Drosophila melanogaster without citrate inside
Descriptor: Fatty acid bindin protein, isoform B
Authors:Cheng, Y.-Y, Huang, Y.-F, Lin, H.-H, Chang, W.W, Lyu, P.-C.
Deposit date:2016-07-04
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The ligand-mediated affinity of brain-type fatty acid-binding protein for membranes determines the directionality of lipophilic cargo transport.
Biochim Biophys Acta Mol Cell Biol Lipids, 1864, 2019
8HOW
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BU of 8how by Molmil
Crystal structure of AtHPPD-Y191052 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(2-phenylethyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2022-12-11
Release date:2023-01-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
5GGE
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BU of 5gge by Molmil
Fatty Acid-Binding Protein in Brain Tissue of Drosophila melanogaster
Descriptor: CITRIC ACID, Fatty acid bindin protein, isoform B
Authors:Cheng, Y.-Y, Huang, Y.-F, Lin, H.-H, Chang, W.W, Lyu, P.-C.
Deposit date:2016-06-15
Release date:2017-06-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:The ligand-mediated affinity of brain-type fatty acid-binding protein for membranes determines the directionality of lipophilic cargo transport.
Biochim Biophys Acta Mol Cell Biol Lipids, 1864, 2019
6JRG
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BU of 6jrg by Molmil
Crystal structure of ZmMoc1 H253A mutant in complex with Holliday junction
Descriptor: DNA (32-MER), DNA (33-MER), MAGNESIUM ION, ...
Authors:Lin, Z, Lin, H, Zhang, D, Yuan, C.
Deposit date:2019-04-03
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Structural basis of sequence-specific Holliday junction cleavage by MOC1.
Nat.Chem.Biol., 15, 2019
6JRF
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BU of 6jrf by Molmil
Crystal structure of ZmMoc1-Holliday junction Complex in the presence of Calcium
Descriptor: CALCIUM ION, DNA (33-MER), Monokaryotic chloroplast 1, ...
Authors:Lin, Z, Lin, H, Zhang, D, Yuan, C.
Deposit date:2019-04-03
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural basis of sequence-specific Holliday junction cleavage by MOC1.
Nat.Chem.Biol., 15, 2019
8IM2
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BU of 8im2 by Molmil
Crystal structure of human HPPD complexed with NTBC
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, ...
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-03-05
Release date:2023-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023
6IS8
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BU of 6is8 by Molmil
Crystal structure of ZmMoc1 D115N mutant in complex with Holliday junction
Descriptor: DNA (33-MER), MAGNESIUM ION, Monokaryotic chloroplast 1, ...
Authors:Lin, Z, Lin, H, Zhang, D, Yuan, C.
Deposit date:2018-11-15
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis of sequence-specific Holliday junction cleavage by MOC1.
Nat.Chem.Biol., 15, 2019
7QU8
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BU of 7qu8 by Molmil
ADGRG3/GPR97 Extracellular Region
Descriptor: Adhesion G protein-coupled receptor G3
Authors:Zheng-Gerard, C, Chu, T.Y, El Omari, K, Lin, H.H, Seiradake, E.
Deposit date:2022-01-17
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:GPR97-mediated PAR2 transactivation via a mPR3-associated macromolecular complex induces inflammatory activation of human neutrophils
Nat Commun, 2022
6JZ8
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b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.583 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020

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