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PDB: 222 results

7PUD
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BU of 7pud by Molmil
Bryoporin - actinoporin from moss Physcomitrium patens
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Bryoporin, SULFATE ION
Authors:Solinc, G, Anderluh, G, Podobnik, M.
Deposit date:2021-09-29
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Pore-forming moss protein bryoporin is structurally and mechanistically related to actinoporins from evolutionarily distant cnidarians.
J.Biol.Chem., 298, 2022
1XQP
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BU of 1xqp by Molmil
Crystal structure of 8-oxoguanosine complexed Pa-AGOG, 8-oxoguanine DNA glycosylase from Pyrobaculum aerophilum
Descriptor: 2'-DEOXY-8-OXOGUANOSINE, 8-oxoguanine DNA glycosylase
Authors:Lingaraju, G.M, Sartori, A.A, Kostrewa, D, Prota, A.E, Jiricny, J, Winkler, F.K.
Deposit date:2004-10-13
Release date:2004-11-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A DNA glycosylase from Pyrobaculum aerophilum with an 8-oxoguanine binding mode and a noncanonical helix-hairpin-helix structure
Structure, 13, 2005
8EB3
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BU of 8eb3 by Molmil
Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment
Descriptor: 1-[4-methyl-2-(pyridin-4-yl)-1,3-thiazol-5-yl]methanamine, CHLORIDE ION, D-GLUTAMIC ACID, ...
Authors:Cooling, G.T, Propp, J, Spies, M.A.
Deposit date:2022-08-30
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of glutamate racemase from Helicobacter pylori in complex with a fragment
To Be Published
6DLI
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BU of 6dli by Molmil
Crystal structure of glutamate racemase from Thermus thermophilus in complex with Beta-chloro-D-alanine
Descriptor: 3-chloro-D-alanine, GLYCEROL, Glutamate racemase
Authors:Cooling, G.T, Vance, N.R, Spies, M.A.
Deposit date:2018-06-01
Release date:2019-06-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of glutamate racemase from Thermus Thermophilus in complex with Beta-chloro-D-alanine
To be Published
1XQO
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BU of 1xqo by Molmil
Crystal structure of native Pa-AGOG, 8-oxoguanine DNA glycosylase from Pyrobaculum aerophilum
Descriptor: 8-oxoguanine DNA glycosylase
Authors:Lingaraju, G.M, Sartori, A.A, Kostrewa, D, Prota, A.E, Jiricny, J, Winkler, F.K.
Deposit date:2004-10-13
Release date:2004-11-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:A DNA glycosylase from Pyrobaculum aerophilum with an 8-oxoguanine binding mode and a noncanonical helix-hairpin-helix structure
Structure, 13, 2005
8BXL
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BU of 8bxl by Molmil
Patulin Synthase from Penicillium expansum
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Tjallinks, G, Boverio, A, Rozeboom, H.J, Fraaije, M.W.
Deposit date:2022-12-09
Release date:2023-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure elucidation and characterization of patulin synthase, insights into the formation of a fungal mycotoxin.
Febs J., 290, 2023
7UJ5
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BU of 7uj5 by Molmil
Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate
Descriptor: D-GLUTAMIC ACID, GLYCEROL, Glutamate racemase
Authors:Cooling, G.T, Spies, M.A.
Deposit date:2022-03-30
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of glutamate racemase from Helicobacter pylori in complex with D-glutamate
To Be Published
3QI5
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BU of 3qi5 by Molmil
Crystal structure of human alkyladenine DNA glycosylase in complex with 3,N4-ethenocystosine containing duplex DNA
Descriptor: DNA (5'-D(*GP*AP*CP*AP*TP*GP*(EDC)P*TP*TP*GP*CP*CP*T)-3'), DNA (5'-D(*GP*GP*CP*AP*AP*GP*CP*AP*TP*GP*TP*CP*A)-3'), DNA-3-methyladenine glycosylase, ...
Authors:Lingaraju, G.M, Davis, C.A, Setser, J.W, Samson, L.D, Drennan, C.L.
Deposit date:2011-01-26
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the Inhibition of Human Alkyladenine DNA Glycosylase (AAG) by 3,N4-Ethenocytosine-containing DNA.
J.Biol.Chem., 286, 2011
5W16
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BU of 5w16 by Molmil
Crystal structure of glutamate racemase from Thermus thermophilus in complex with D-glutamate
Descriptor: CHLORIDE ION, D-GLUTAMIC ACID, Glutamate racemase, ...
Authors:Cooling, G.T, Vance, N.R, Spies, M.A.
Deposit date:2017-06-01
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:Crystal structure of glutamate racemase from Thermus Thermophilus in complex with D-glutamate
To Be Published
3EHV
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BU of 3ehv by Molmil
X-ray structure of human ubiquitin Zn(II) adduct
Descriptor: Ubiquitin, ZINC ION
Authors:Falini, G, Fermani, S, Tosi, G.
Deposit date:2008-09-15
Release date:2009-03-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural probing of Zn(II), Cd(II) and Hg(II) binding to human ubiquitin.
Chem.Commun.(Camb.), 45, 2008
3EEC
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BU of 3eec by Molmil
X-ray structure of human ubiquitin Cd(II) adduct
Descriptor: CADMIUM ION, Ubiquitin
Authors:Falini, G, Fermani, S, Tosi, G, Arnesano, F, Natile, G.
Deposit date:2008-09-04
Release date:2009-03-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural probing of Zn(II), Cd(II) and Hg(II) binding to human ubiquitin.
Chem.Commun.(Camb.), 45, 2008
3EFU
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BU of 3efu by Molmil
X-ray structure of human ubiquitin-Hg(II) adduct
Descriptor: MERCURY (II) ION, Ubiquitin
Authors:Falini, G, Fermani, S, Tosi, G.
Deposit date:2008-09-10
Release date:2008-12-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural probing of Zn(ii), Cd(ii) and Hg(ii) binding to human ubiquitin.
Chem.Commun.(Camb.), 45, 2008
1NBO
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BU of 1nbo by Molmil
The dual coenzyme specificity of photosynthetic glyceraldehyde-3-phosphate dehydrogenase interpreted by the crystal structure of A4 isoform complexed with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, glyceraldehyde-3-phosphate dehydrogenase A
Authors:Falini, G, Fermani, S, Ripamonti, A, Sabatino, P, Sparla, F, Pupillo, P, Trost, P.
Deposit date:2002-12-03
Release date:2003-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dual Coenzyme Specificity of Photosynthetic Glyceraldehyde-3-phosphate Dehydrogenase Interpreted by the Crystal Structure of A(4) Isoform Complexed with NAD
Biochemistry, 42, 2003
4WSN
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BU of 4wsn by Molmil
Crystal structure of the COP9 signalosome, a P1 crystal form
Descriptor: COP9 signalosome complex subunit 1, COP9 signalosome complex subunit 2, COP9 signalosome complex subunit 3, ...
Authors:Bunker, R.D, Lingaraju, G.M, Thoma, N.H.
Deposit date:2014-10-28
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Cullin-RING ubiquitin E3 ligase regulation by the COP9 signalosome.
Nature, 531, 2016
5XF1
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BU of 5xf1 by Molmil
Structure of the Full-length glucagon class B G protein-coupled receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhang, H, Qiao, A, Yang, D, Yang, L, Dai, A, de Graaf, C, Reedtz-Runge, S, Dharmarajan, V, Zhang, H, Han, G.W, Grant, T, Sierra, R, Weierstall, U, Nelson, G, Liu, W, Wu, Y, Ma, L, Cai, X, Lin, G, Wu, X, Geng, Z, Dong, Y, Song, G, Griffin, P, Lau, J, Cherezov, V, Yang, H, Hanson, M, Stevens, R, Jiang, H, Wang, M, Zhao, Q, Wu, B.
Deposit date:2017-04-06
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Structure of the full-length glucagon class B G-protein-coupled receptor.
Nature, 546, 2017
5XEZ
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BU of 5xez by Molmil
Structure of the Full-length glucagon class B G protein-coupled receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-{[(4-cyclohexylphenyl){[3-(methylsulfonyl)phenyl]carbamoyl}amino]methyl}-N-(1H-tetrazol-5-yl)benzamide, ...
Authors:Zhang, H, Qiao, A, Yang, D, Yang, L, Dai, A, de Graaf, C, Reedtz-Runge, S, Dharmarajan, V, Zhang, H, Han, G.W, Grant, T, Sierra, R, Weierstall, U, Nelson, G, Liu, W, Wu, Y, Ma, L, Cai, X, Lin, G, Wu, X, Geng, Z, Dong, Y, Song, G, Griffin, P, Lau, J, Cherezov, V, Yang, H, Hanson, M, Stevens, R, Jiang, H, Wang, M, Zhao, Q, Wu, B.
Deposit date:2017-04-06
Release date:2017-05-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the full-length glucagon class B G-protein-coupled receptor.
Nature, 546, 2017
5YUD
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BU of 5yud by Molmil
Flagellin derivative in complex with the NLR protein NAIP5
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Baculoviral IAP repeat-containing protein 1e, Phase 2 flagellin,Flagellin
Authors:Yang, X.R, Yang, F, Wang, W.G, Lin, G.Z.
Deposit date:2017-11-21
Release date:2018-01-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structural basis for specific flagellin recognition by the NLR protein NAIP5.
Cell Res., 28, 2018
5X8I
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BU of 5x8i by Molmil
Crystal structure of human CLK1 in complex with compound 25
Descriptor: 5-[1-[(1S)-1-(4-fluorophenyl)ethyl]-[1,2,3]triazolo[4,5-c]quinolin-8-yl]-1,3-benzoxazole, Dual specificity protein kinase CLK1
Authors:Sun, Q.Z, Lin, G.F, Li, L.L, Jin, X.T, Huang, L.Y, Zhang, G, Wei, Y.Q, Lu, G.W, Yang, S.Y.
Deposit date:2017-03-02
Release date:2017-08-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Discovery of Potent and Selective Inhibitors of Cdc2-Like Kinase 1 (CLK1) as a New Class of Autophagy Inducers
J. Med. Chem., 60, 2017
5XJX
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BU of 5xjx by Molmil
Pre-formed plant receptor ERL1-TMM complex
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G, Zhang, L, Han, Z, Yang, X, Liu, W, Qi, Y, Chang, J, Li, E.
Deposit date:2017-05-04
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.055 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XKN
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BU of 5xkn by Molmil
Crystal structure of plant receptor ERL2 in complexe with EPFL4
Descriptor: EPIDERMAL PATTERNING FACTOR-like protein 4, LRR receptor-like serine/threonine-protein kinase ERL2
Authors:Chai, J, Lin, G.
Deposit date:2017-05-08
Release date:2019-01-23
Method:X-RAY DIFFRACTION (3.651 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XJO
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BU of 5xjo by Molmil
Plant receptor ERL1-TMM in complex with peptide EPF1
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein EPIDERMAL PATTERNING FACTOR 1, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G, Zhang, L, Han, Z, Shpak, E.D, Yang, X.
Deposit date:2017-05-03
Release date:2019-01-23
Method:X-RAY DIFFRACTION (2.626 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
5XKJ
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BU of 5xkj by Molmil
Crystal structure of plant receptor ERL1-TMM in complexe with EPF2
Descriptor: LRR receptor-like serine/threonine-protein kinase ERL1, Protein EPIDERMAL PATTERNING FACTOR 2, Protein TOO MANY MOUTHS
Authors:Chai, J, Lin, G.
Deposit date:2017-05-07
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.475 Å)
Cite:A receptor-like protein acts as a specificity switch for the regulation of stomatal development.
Genes Dev., 31, 2017
8D4X
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BU of 8d4x by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a dimeric form
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Wang, F, He, Q, Lin, G, Li, H.
Deposit date:2022-06-02
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
8E0Q
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BU of 8e0q by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a C2 symmetric dimeric form
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Wang, F, He, Q, Lin, G, Li, H.
Deposit date:2022-08-09
Release date:2023-04-19
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023
8EWI
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BU of 8ewi by Molmil
Structure of the human UBR5 HECT-type E3 ubiquitin ligase in a tetrameric form
Descriptor: E3 ubiquitin-protein ligase UBR5, ZINC ION
Authors:Wang, F, He, Q, Lin, G, Li, H.
Deposit date:2022-10-23
Release date:2023-04-19
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the human UBR5 E3 ubiquitin ligase.
Structure, 31, 2023

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