Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 372 results

5ITM
DownloadVisualize
BU of 5itm by Molmil
The structure of truncated histone-like protein
Descriptor: AbrB family transcriptional regulator
Authors:Lin, B.L, Chen, C.Y, Huang, C.H, Ko, T.P, Chiang, C.H, Lin, K.F, Chang, Y.C, Lin, P.Y, Tsai, H.H.G, Wang, A.H.J.
Deposit date:2016-03-17
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Arginine Pairs and C-Termini of the Sso7c4 from Sulfolobus solfataricus Participate in Binding and Bending DNA.
PLoS ONE, 12, 2017
5ITJ
DownloadVisualize
BU of 5itj by Molmil
The structure of histone-like protein
Descriptor: AbrB family transcriptional regulator, SULFATE ION, TETRAETHYLENE GLYCOL
Authors:Lin, B.L, Chen, C.Y, Huang, C.H, Ko, T.P, Chiang, C.H, Lin, K.F, Chang, Y.C, Lin, P.Y, Tsai, H.H.G, Wang, A.H.J.
Deposit date:2016-03-17
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:The Arginine Pairs and C-Termini of the Sso7c4 from Sulfolobus solfataricus Participate in Binding and Bending DNA.
PLoS ONE, 12, 2017
1MGQ
DownloadVisualize
BU of 1mgq by Molmil
CRYSTAL STRUCTURE OF A HEPTAMERIC SM-LIKE PROTEIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: SM-LIKE PROTEIN
Authors:Collins, B.M, Naidoo, N, Harrop, S.J, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2002-08-16
Release date:2002-12-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined Structure of Sm-Like Protein Heptamer from Methanobacterium thermoautotrophicum
To be published
3LW8
DownloadVisualize
BU of 3lw8 by Molmil
Shigella IpgB2 in complex with human RhoA, GDP and Mg2+ (complex A)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, IpgB2, MAGNESIUM ION, ...
Authors:Klink, B.U, Barden, S, Heidler, T.V, Borchers, C, Ladwein, M, Stradal, T.E.B, Rottner, K, Heinz, D.W.
Deposit date:2010-02-23
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Shigella IPGB2 in complex with human RhoA: Implications for the mechanism of bacterial GEF-mimicry
J.Biol.Chem., 285, 2010
4YMR
DownloadVisualize
BU of 4ymr by Molmil
Crystal structure of the domain swapped PXB/TPR domain of mouse SNX21
Descriptor: Protein Snx21
Authors:Collins, B.C, Teasdale, R.D, Clairfeuille, T.
Deposit date:2015-03-07
Release date:2015-04-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Membrane Binding Properties of the Endosomal Tetratricopeptide Repeat (TPR) Domain-containing Sorting Nexins SNX20 and SNX21.
J.Biol.Chem., 290, 2015
3LH9
DownloadVisualize
BU of 3lh9 by Molmil
Crystal structure of mouse VPS26B(L197S/R199E) in spacegroup P41 21 2
Descriptor: Vacuolar protein sorting-associated protein 26B
Authors:Collins, B, Shaw, D, Norwood, S.
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Assembly and solution structure of the core retromer protein complex.
Traffic, 12, 2011
3LH8
DownloadVisualize
BU of 3lh8 by Molmil
Crystal structure of mouse VPS26B in spacegroup P41 21 2
Descriptor: Vacuolar protein sorting-associated protein 26B
Authors:Collins, B, Shaw, D, Norwood, S.
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Assembly and solution structure of the core retromer protein complex.
Traffic, 12, 2011
6DAN
DownloadVisualize
BU of 6dan by Molmil
PhdJ WT 2 Angstroms resolution
Descriptor: CHLORIDE ION, PhdJ
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-04-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAO
DownloadVisualize
BU of 6dao by Molmil
NahE WT selenomethionine
Descriptor: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-05-08
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6DAQ
DownloadVisualize
BU of 6daq by Molmil
PhdJ bound to substrate intermediate
Descriptor: PhdJ
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-04-10
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
6YEF
DownloadVisualize
BU of 6yef by Molmil
70S initiation complex with assigned rRNA modifications from Staphylococcus aureus
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S11, ...
Authors:Fatkhullin, B, Golubev, A, Khusainov, I, Yusupova, G, Yusupov, M.
Deposit date:2020-03-24
Release date:2021-01-27
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 angstrom resolution.
Febs Lett., 594, 2020
6XT9
DownloadVisualize
BU of 6xt9 by Molmil
Subunits BBS 1,4,8,9,18 of the human BBSome complex
Descriptor: BBSome-interacting protein 1, Bardet-Biedl syndrome 1 protein, Bardet-Biedl syndrome 4 protein, ...
Authors:Klink, B.U, Raunser, S, Gatsogiannis, C.
Deposit date:2020-01-15
Release date:2020-01-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the human BBSome core complex.
Elife, 9, 2020
8BXA
DownloadVisualize
BU of 8bxa by Molmil
Crystal structure of ribosome binding factor A (RbfA) from S. aureus
Descriptor: Ribosome-binding factor A
Authors:Fatkhullin, B, Bikmullin, A, Gabdulkhakov, A, Khusainov, I, Validov, S, Usachev, K, Yusupov, M.
Deposit date:2022-12-08
Release date:2023-02-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Yet Another Similarity between Mitochondrial and Bacterial Ribosomal Small Subunit Biogenesis Obtained by Structural Characterization of RbfA from S. aureus.
Int J Mol Sci, 24, 2023
7NS7
DownloadVisualize
BU of 7ns7 by Molmil
Human L-alanine:glyoxylate aminotransferase minor allele variant: AGXT-Mi (P11L-I340M)
Descriptor: L-alanine:glyoxylate aminotransferase
Authors:Cellini, B, Dindo, M.
Deposit date:2021-03-05
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural dynamics shape the fitness window of alanine:glyoxylate aminotransferase.
Protein Sci., 31, 2022
6XTB
DownloadVisualize
BU of 6xtb by Molmil
Subunit BBS 5 of the human core BBSome complex
Descriptor: Bardet-Biedl syndrome 5 protein
Authors:Klink, B.U, Raunser, S, Gatsogiannis, C.
Deposit date:2020-01-15
Release date:2020-02-19
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of the human BBSome core complex.
Elife, 9, 2020
6OGM
DownloadVisualize
BU of 6ogm by Molmil
Crystal structure of apo unFused 4-OT
Descriptor: 4-oxalocrotonate tautomerase, GLYCEROL
Authors:Medellin, B.P, Whitman, C.P, Zhang, Y.J.
Deposit date:2019-04-03
Release date:2020-02-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.865 Å)
Cite:Structural, Kinetic, and Mechanistic Analysis of an Asymmetric 4-Oxalocrotonate Tautomerase Trimer.
Biochemistry, 58, 2019
6OPJ
DownloadVisualize
BU of 6opj by Molmil
Menin in complex with peptide inhibitor 25
Descriptor: DIMETHYL SULFOXIDE, Menin, Peptide inhibitor 25, ...
Authors:Linhares, B.M, Fortuna, P, Cierpicki, T, Grembecka, J, Berlicki, L.
Deposit date:2019-04-25
Release date:2020-09-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5006572 Å)
Cite:Covalent and noncovalent constraints yield a figure eight-like conformation of a peptide inhibiting the menin-MLL interaction.
Eur.J.Med.Chem., 207, 2020
6O5I
DownloadVisualize
BU of 6o5i by Molmil
Menin in complex with MI-3454
Descriptor: DIMETHYL SULFOXIDE, Menin, SULFATE ION, ...
Authors:Linhares, B.M, Klossowski, S, Cierpicki, T, Grembecka, J.
Deposit date:2019-03-03
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.24025619 Å)
Cite:Menin inhibitor MI-3454 induces remission in MLL1-rearranged and NPM1-mutated models of leukemia.
J.Clin.Invest., 130, 2020
6SQ8
DownloadVisualize
BU of 6sq8 by Molmil
Structure of amide bond synthetase McbA from Marinactinospora thermotolerans
Descriptor: 1-ethanoyl-9~{H}-pyrido[3,4-b]indole-3-carboxylic acid, ADENOSINE MONOPHOSPHATE, Fatty acid CoA ligase
Authors:Rowlinson, B, Petchey, M, Grogan, G.
Deposit date:2019-09-03
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Biocatalytic Synthesis of Moclobemide Using the Amide Bond Synthetase McbA Coupled with an ATP Recycling System.
Acs Catalysis, 10, 2020
6RJI
DownloadVisualize
BU of 6rji by Molmil
X-ray structure of the elongation factor P of S. aureus
Descriptor: Elongation factor P
Authors:Fatkhullin, B.F, Golubev, A.A, Gabdulkhakov, A.G, Khusainov, I.S, Validov, S.Z, Usachev, K.S, Yusupova, G, Yusupov, M.M.
Deposit date:2019-04-27
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.
Eur.Biophys.J., 49, 2020
5W8M
DownloadVisualize
BU of 5w8m by Molmil
Crystal structure of Chaetomium thermophilum Vps29
Descriptor: GLYCEROL, TRIETHYLENE GLYCOL, Vacuolar protein sorting-associated protein 29
Authors:Collins, B.M, Leneva, N.
Deposit date:2017-06-21
Release date:2018-06-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of the membrane-assembled retromer coat determined by cryo-electron tomography.
Nature, 561, 2018
6N5X
DownloadVisualize
BU of 6n5x by Molmil
Crystal structure of the SNX5 PX domain in complex with the CI-MPR (space group P212121 - Form 1)
Descriptor: GLYCEROL, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500), Sorting nexin-5,Cation-independent mannose-6-phosphate receptor
Authors:Collins, B, Paul, B, Weeratunga, S.
Deposit date:2018-11-22
Release date:2019-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Molecular identification of a BAR domain-containing coat complex for endosomal recycling of transmembrane proteins.
Nat.Cell Biol., 21, 2019
6SJ5
DownloadVisualize
BU of 6sj5 by Molmil
Crystal structure of the uL14-RsfS complex from Staphylococcus aureus
Descriptor: 50S ribosomal protein L14, ACETIC ACID, PHOSPHATE ION, ...
Authors:Fatkhullin, B, Gabdulkhakov, A, Yusupova, G, Yusupov, M.
Deposit date:2019-08-12
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.26686549 Å)
Cite:Mechanism of ribosome shutdown by RsfS in Staphylococcus aureus revealed by integrative structural biology approach.
Nat Commun, 11, 2020
6N5Z
DownloadVisualize
BU of 6n5z by Molmil
Crystal structure of the SNX5 PX domain in complex with the Sema4C
Descriptor: CHLORIDE ION, Sorting nexin-5,Semaphorin-4C
Authors:Collins, B, Paul, B, Weeratunga, S.
Deposit date:2018-11-22
Release date:2019-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Molecular identification of a BAR domain-containing coat complex for endosomal recycling of transmembrane proteins.
Nat.Cell Biol., 21, 2019
6N5Y
DownloadVisualize
BU of 6n5y by Molmil
Crystal structure of the SNX5 PX domain in complex with the CI-MPR (space group P212121 - Form 1)
Descriptor: Sorting nexin-5,Cation-independent mannose-6-phosphate receptor
Authors:Collins, B, Paul, B, Weeratunga, S.
Deposit date:2018-11-22
Release date:2019-09-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Molecular identification of a BAR domain-containing coat complex for endosomal recycling of transmembrane proteins.
Nat.Cell Biol., 21, 2019

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon