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PDB: 1174 件

3B98
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Crystal structure of zebrafish prostacyclin synthase (cytochrome P450 8A1)
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Prostaglandin I2 synthase
著者Li, Y.-C, Chiang, C.-W, Yeh, H.-C, Hsu, P.-Y, Whitby, F.G, Wang, L.-H, Chan, N.-L.
登録日2007-11-03
公開日2007-11-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structures of Prostacyclin Synthase and Its Complexes with Substrate Analog and Inhibitor Reveal a Ligand-specific Heme Conformation Change
J.Biol.Chem., 283, 2008
3B6H
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Crystal structure of human prostacyclin synthase in complex with inhibitor minoxidil
分子名称: 6-PIPERIDIN-1-YLPYRIMIDINE-2,4-DIAMINE 3-OXIDE, PROTOPORPHYRIN IX CONTAINING FE, Prostacyclin synthase, ...
著者Li, Y.-C, Chiang, C.-W, Yeh, H.-C, Hsu, P.-Y, Whitby, F.G, Wang, L.-H, Chan, N.-L.
登録日2007-10-29
公開日2007-11-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structures of Prostacyclin Synthase and Its Complexes with Substrate Analog and Inhibitor Reveal a Ligand-specific Heme Conformation Change
J.Biol.Chem., 283, 2008
8JOL
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BU of 8jol by Molmil
cryo-EM structure of the CED-4/CED-3 holoenzyme
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell death protein 3, Cell death protein 4, ...
著者Li, Y, Tian, L, Zhang, Y, Shi, Y.
登録日2023-06-07
公開日2023-06-28
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into CED-3 activation.
Life Sci Alliance, 6, 2023
5DO2
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Complex structure of MERS-RBD bound with 4C2 antibody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4C2 heavy chain, 4C2 light chain, ...
著者Li, Y, Wan, Y, Liu, P, Zhao, J, Lu, G, Qi, J, Wang, Q, Lu, X, Wu, Y, Liu, W, Yuen, K.Y, Perlman, S, Gao, G.F, Yan, J.
登録日2015-09-10
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.409 Å)
主引用文献A humanized neutralizing antibody against MERS-CoV targeting the receptor-binding domain of the spike protein.
Cell Res., 25, 2015
3FYH
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Recombinase in complex with ADP and metatungstate
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair and recombination protein radA, MAGNESIUM ION, ...
著者Li, Y, He, Y, Luo, Y.
登録日2009-01-22
公開日2009-09-01
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an archaeal Rad51 homologue in complex with a metatungstate inhibitor.
Biochemistry, 48, 2009
7CYV
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Crystal structure of FD20, a neutralizing single-chain variable fragment (scFv) in complex with SARS-CoV-2 Spike receptor-binding domain (RBD)
分子名称: Spike protein S1, The heavy chain variable region of the scFv FD20,The light chain variable region of the scFv FD20, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)][alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Li, Y, Li, T, Lai, Y, Cai, H, Yao, H, Li, D.
登録日2020-09-04
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Uncovering a conserved vulnerability site in SARS-CoV-2 by a human antibody.
Embo Mol Med, 13, 2021
3ETL
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RadA recombinase from Methanococcus maripaludis in complex with AMPPNP
分子名称: DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Li, Y, He, Y, Luo, Y.
登録日2008-10-08
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conservation of a conformational switch in RadA recombinase from Methanococcus maripaludis.
Acta Crystallogr.,Sect.D, 65, 2009
3EWA
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RADA recombinase from METHANOCOCCUS MARIPALUDIS in complex with AMPPNP and ammonium ions
分子名称: DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Li, Y, He, Y, Luo, Y.
登録日2008-10-14
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conservation of a conformational switch in RadA recombinase from Methanococcus maripaludis.
Acta Crystallogr.,Sect.D, 65, 2009
3EW9
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RADA recombinase from METHANOCOCCUS MARIPALUDIS in complex with AMPPNP and potassium ions
分子名称: DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Li, Y, He, Y, Luo, Y.
登録日2008-10-14
公開日2009-05-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conservation of a conformational switch in RadA recombinase from Methanococcus maripaludis.
Acta Crystallogr.,Sect.D, 65, 2009
4NHJ
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Crystal structure of Klebsiella pneumoniae RstA DNA-binding domain in complex with RstA box
分子名称: 5'-D(*CP*AP*GP*GP*GP*AP*GP*TP*AP*AP*CP*GP*GP*AP*AP*TP*GP*TP*AP*CP*AP*AP*C)-3', 5'-D(*GP*GP*TP*TP*GP*TP*AP*CP*AP*TP*TP*CP*CP*GP*TP*TP*AP*CP*TP*CP*CP*CP*T)-3', DNA-binding transcriptional regulator RstA
著者Li, Y.C, Hsiao, C.D.
登録日2013-11-05
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.701 Å)
主引用文献Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element.
Nucleic Acids Res., 42, 2014
3JBB
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Characterization of red-shifted phycobiliprotein complexes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris
分子名称: PHYCOCYANOBILIN, SULFATE ION, allophycocyanin beta chain, ...
著者Li, Y, Lin, Y, Garvey, C, Birch, D, Corkery, R.W, Loughlin, P.C, Scheer, H, Willows, R.D, Chen, M.
登録日2015-08-26
公開日2015-11-11
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (26 Å)
主引用文献Characterization of red-shifted phycobilisomes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris.
Biochim.Biophys.Acta, 1857, 2015
1KQL
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Crystal structure of the C-terminal region of striated muscle alpha-tropomyosin at 2.7 angstrom resolution
分子名称: Fusion Protein of and striated muscle alpha-tropomyosin and the GCN4 leucine zipper
著者Li, Y, Mui, S, Brown, J.H, Strand, J, Reshetnikova, L, Tobacman, L.S, Cohen, C.
登録日2002-01-07
公開日2002-05-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of the C-terminal fragment of striated-muscle alpha-tropomyosin reveals a key troponin T recognition site.
Proc.Natl.Acad.Sci.USA, 99, 2002
4NIC
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Crystal structure of Klebsiella pneumoniae RstA BeF3-activated N-terminal receiver domain
分子名称: BERYLLIUM TRIFLUORIDE ION, DNA-binding transcriptional regulator RstA, MAGNESIUM ION
著者Li, Y.C, Hsiao, C.D.
登録日2013-11-06
公開日2014-07-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structural dynamics of the two-component response regulator RstA in recognition of promoter DNA element.
Nucleic Acids Res., 42, 2014
4YZE
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BU of 4yze by Molmil
Crystal structure of E.coli NemR reduced form
分子名称: HTH-type transcriptional repressor NemR
著者Li, Y, Gray, M.J, Jakob, U, Xu, Z.
登録日2015-03-24
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Does the Transcription Factor NemR Use a Regulatory Sulfenamide Bond to Sense Bleach?
Antioxid.Redox Signal., 23, 2015
8J4I
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Unveiling the Role of Human Prohibitin 2 as a Mitochondrial Calcium Channel in Parkinson's Disease
分子名称: Prohibitin-2
著者Li, Y.Y, Fang, Y, Gao, Y.X, Ding, W, Yang, J, Liu, Y, Shen, B, Wang, J.F, Zhou, S.
登録日2023-04-20
公開日2024-06-05
実験手法SOLUTION NMR
主引用文献Human Prohibitin 2 is a Mitochondrial Ca2+-Selective Channel
To Be Published
4ZVV
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Lactate dehydrogenase A in complex with a trisubstituted piperidine-2,4-dione inhibitor GNE-140
分子名称: (2~{R})-5-(2-chlorophenyl)sulfanyl-2-(4-morpholin-4-ylphenyl)-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one, L-lactate dehydrogenase A chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Li, Y, Chen, Z, Eigenbrot, C.
登録日2015-05-18
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Metabolic plasticity underpins innate and acquired resistance to LDHA inhibition.
Nat.Chem.Biol., 12, 2016
3D34
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Structure of the F-spondin domain of mindin
分子名称: CALCIUM ION, NICKEL (II) ION, Spondin-2
著者Li, Y, Mariuzza, R.A.
登録日2008-05-09
公開日2009-02-17
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule.
Embo J., 28, 2009
5ZN9
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Crystal structure of PX domain
分子名称: SULFATE ION, Sorting nexin-27
著者Li, Y, Zhu, Z, Li, F, Liao, S, Xu, C.
登録日2018-04-08
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.776 Å)
主引用文献Crystal structure of PX domain
To Be Published
4P5B
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Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br dUMP
分子名称: 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
著者Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
登録日2014-03-15
公開日2015-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.274 Å)
主引用文献Crystal structure of a UMP/dUMP methylase PolB form Streptomyces cacaoi bound with 5-Br dUMP
To Be Published
3HHS
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BU of 3hhs by Molmil
Crystal Structure of Manduca sexta prophenoloxidase
分子名称: COPPER (II) ION, Phenoloxidase subunit 1, Phenoloxidase subunit 2
著者Li, Y, Wang, Y, Jiang, H, Deng, J.
登録日2009-05-17
公開日2009-09-29
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of Manduca sexta prophenoloxidase provides insights into the mechanism of type 3 copper enzymes.
Proc.Natl.Acad.Sci.USA, 106, 2009
8GJY
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Structure of a cGAS-like receptor Sp-cGLR1 from S. pistillata
分子名称: cGAS-like receptor 1
著者Li, Y, Toyoda, H, Slavik, K.M, Morehouse, B.R, Kranzusch, P.J.
登録日2023-03-16
公開日2023-07-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献cGLRs are a diverse family of pattern recognition receptors in innate immunity.
Cell, 186, 2023
4P5A
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Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi bound with 5-Br UMP
分子名称: 5-BROMO-URIDINE-5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase ThyX
著者Li, Y, Chen, W, Li, J, Xia, Z, Deng, Z, Zhou, J.
登録日2014-03-15
公開日2015-12-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structure of a UMP/dUMP methylase PolB from Streptomyces cacaoi with 5-Br UMP
To Be Published
1KGD
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BU of 1kgd by Molmil
Crystal Structure of the Guanylate Kinase-like Domain of Human CASK
分子名称: FORMIC ACID, PERIPHERAL PLASMA MEMBRANE CASK
著者Li, Y, Spangenberg, O, Paarmann, I, Konrad, M, Lavie, A.
登録日2001-11-26
公開日2001-12-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.314 Å)
主引用文献Structural basis for nucleotide-dependent regulation of membrane-associated guanylate kinase-like domains.
J.Biol.Chem., 277, 2002
8K80
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Crystal structure of Langya Virus attachment (G) glycoprotein
分子名称: Langya Virus attachment glycoprotein
著者Li, Y.H, Huang, X.Y, Xu, J.J.
登録日2023-07-28
公開日2023-09-13
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Crystal structure of Langya Virus attachment (G) glycoprotein
To Be Published
6M62
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Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
分子名称: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
著者Li, Y, Micic, J.
登録日2020-03-12
公開日2020-08-26
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.
Nat Commun, 11, 2020

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