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PDB: 248 results

5WWX
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Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C complex with RNA
Descriptor: NICKEL (II) ION, RNA (5'-R(P*AP*GP*AP*GP*U)-3'), RNA-binding E3 ubiquitin-protein ligase MEX3C
Authors:Yang, L, Wang, C, Li, F, Gong, Q.
Deposit date:2017-01-05
Release date:2017-08-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity
J. Biol. Chem., 292, 2017
5YYX
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Crystal Structure of the MEK1 FHA domain
Descriptor: Meiosis-specific serine/threonine-protein kinase MEK1
Authors:Xie, C, Li, F, Jiang, Y, Wu, J, Shi, Y.
Deposit date:2017-12-11
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.684 Å)
Cite:Structural insights into the recognition of phosphorylated Hop1 by Mek1
Acta Crystallogr D Struct Biol, 74, 2018
5Y1U
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BU of 5y1u by Molmil
Crystal structure of RBBP4 bound to AEBP2 RRK motif
Descriptor: Histone-binding protein RBBP4, SULFATE ION, Zinc finger protein AEBP2
Authors:Sun, A, Li, F, Wu, J, Shi, Y.
Deposit date:2017-07-21
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.141 Å)
Cite:Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4
Protein Cell, 2017
5Z4J
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Structure of Tailor in complex with U4 RNA
Descriptor: RNA (5'-R(*UP*UP*UP*U)-3'), Terminal uridylyltransferase Tailor
Authors:Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
Deposit date:2018-01-11
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5VST
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BU of 5vst by Molmil
Crystal structure of murine CEACAM1b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Biliary glycoprotein
Authors:Peng, G, Yang, Y, Pasquarella, J.R, Xu, L, Qian, Z, Holmes, K.V, Li, F.
Deposit date:2017-05-12
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular mechanism for coronavirus-driven evolution of mouse receptor
J. Biol. Chem., 292, 2017
4NN2
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BU of 4nn2 by Molmil
Protein Crystal Structure of Human Borjeson-Forssman-Lehmann Syndrome Associated Protein PHF6
Descriptor: GLYCEROL, PHD finger protein 6, ZINC ION
Authors:Liu, Z, Li, F, Zhang, J, Mei, Y, Wu, J, Shi, Y.
Deposit date:2013-11-16
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.472 Å)
Cite:Crystal Structure of the second extended PHD domain of human PHF6 protein
J.Biol.Chem., 2014
5Z4A
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BU of 5z4a by Molmil
Structure of Tailor in complex with AGU RNA
Descriptor: RNA (5'-R(*AP*GP*U)-3'), Terminal uridylyltransferase Tailor
Authors:Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
Deposit date:2018-01-10
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.637 Å)
Cite:Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
4NVQ
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BU of 4nvq by Molmil
Human G9a in Complex with Inhibitor A-366
Descriptor: 5'-methoxy-6'-[3-(pyrrolidin-1-yl)propoxy]spiro[cyclobutane-1,3'-indol]-2'-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Sweis, R.F, Pliushchev, M, Brown, P.J, Guo, J, Li, F, Maag, D, Petros, A.M, Soni, N.B, Tse, C, Vedadi, M, Michaelides, M.R, Chiang, G.G, Pappano, W.N.
Deposit date:2013-12-05
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Discovery and development of potent and selective inhibitors of histone methyltransferase g9a.
ACS Med Chem Lett, 5, 2014
4NZ8
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Crystal structure of porcine aminopeptidase-N complexed with cleaved poly-alanine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Chen, L, Lin, Y.L, Peng, G, Li, F.
Deposit date:2013-12-11
Release date:2013-12-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for multifunctional roles of mammalian aminopeptidase N.
Proc.Natl.Acad.Sci.USA, 109, 2012
8GY6
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BU of 8gy6 by Molmil
Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
Descriptor: Gossypol, Non-structural protein 7, Non-structural protein 8, ...
Authors:Wang, W, Ren, M, Li, F.
Deposit date:2022-09-21
Release date:2023-11-01
Method:ELECTRON MICROSCOPY
Cite:Structure of SARS-CoV-2 RNA-dependent RNA polymerase with gossypol binding
To Be Published
6J66
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BU of 6j66 by Molmil
Chondroitin sulfate/dermatan sulfate endolytic 4-O-sulfatase
Descriptor: CALCIUM ION, Chondroitin sulfate/dermatan sulfate 4-O-endosulfatase protein
Authors:Gu, L, Li, F, Su, T, Wang, S.
Deposit date:2019-01-14
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Comparative Study of Two Chondroitin Sulfate/Dermatan Sulfate 4-O-Sulfatases With High Identity.
Front Microbiol, 10, 2019
6J2P
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BU of 6j2p by Molmil
Crystal structure of Saccharomyces cerevisiae Spp1 in complex with H3K4me3
Descriptor: COMPASS component SPP1, Histone H3, ZINC ION
Authors:He, C, Li, F.
Deposit date:2019-01-02
Release date:2019-09-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural basis for histone H3K4me3 recognition by the N-terminal domain of the PHD finger protein Spp1.
Biochem.J., 476, 2019
6J7J
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BU of 6j7j by Molmil
Crystal structure of Pseudomonas aeruginosa Earp
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Pseudomonas aeruginosa Earp
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2019-06-26
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019
7KM5
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BU of 7km5 by Molmil
Crystal structure of SARS-CoV-2 RBD complexed with Nanosota-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Spike protein S1, ...
Authors:Ye, G, Shi, K, Aihara, H, Li, F.
Deposit date:2020-11-02
Release date:2021-08-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:The development of Nanosota - 1 as anti-SARS-CoV-2 nanobody drug candidates.
Elife, 10, 2021
6J7K
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Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha
Descriptor: 2'-DEOXY-THYMIDINE-BETA-L-RHAMNOSE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Pseudomonas aeruginosa Earp
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019
6J7L
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BU of 6j7l by Molmil
Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Pseudomonas aeruginosa Earp, THYMIDINE-5'-DIPHOSPHATE
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019
6J7M
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BU of 6j7m by Molmil
Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P
Descriptor: Earp, Elongation factor P, GLYCEROL, ...
Authors:He, C, Li, F.
Deposit date:2019-01-18
Release date:2019-05-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Complex Structure ofPseudomonas aeruginosaArginine Rhamnosyltransferase EarP with Its Acceptor Elongation Factor P.
J.Bacteriol., 201, 2019
2FIH
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BU of 2fih by Molmil
Crystal Structure Analysis of the B-DNA Dodecamer CGCGAA-aU-TCGCG, with Incorporated Arabino-Uridine (aU)
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*(UAR)P*TP*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Egli, M, Li, F.
Deposit date:2005-12-29
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
3PHD
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BU of 3phd by Molmil
Crystal structure of human HDAC6 in complex with ubiquitin
Descriptor: Histone deacetylase 6, Polyubiquitin, ZINC ION
Authors:Dong, A, Qui, W, Ravichandran, M, Schuetz, A, Loppnau, P, Li, F, Mackenzie, F, Kozieradzki, I, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2010-11-03
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Protein Aggregates Are Recruited to Aggresome by Histone Deacetylase 6 via Unanchored Ubiquitin C Termini.
J.Biol.Chem., 287, 2012
2FII
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BU of 2fii by Molmil
Crystal Structure Analysis of the B-DNA Dodecamer CGCGAAT-aU-CGCG, with Incorporated Arabino-Uridin (aU)
Descriptor: 5'-D(*CP*GP*CP*GP*AP*AP*TP*(UAR)P*CP*GP*CP*G)-3', MAGNESIUM ION
Authors:Egli, M, Li, F.
Deposit date:2005-12-29
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
2FIJ
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BU of 2fij by Molmil
Crystal Structure Analysis of the A-DNA Decamer GCGT-2'OMeA-aU-ACGC, with Incorporated 2'-O-Methylated-Adenosine (2'OMeA) and Arabino-Uridine (aU)
Descriptor: 5'-D(*GP*CP*GP*TP*(A2M)P*(UAR)P*AP*CP*GP*C)-3', CHLORIDE ION, COBALT HEXAMMINE(III)
Authors:Egli, M, Li, F.
Deposit date:2005-12-29
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:2'-Fluoroarabino- and arabinonucleic acid show different conformations, resulting in deviating RNA affinities and processing of their heteroduplexes with RNA by RNase H.
Biochemistry, 45, 2006
7VCU
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BU of 7vcu by Molmil
Human p97 double hexamer conformer I with D1-ATPgammaS and D2-ADP bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
Deposit date:2021-09-04
Release date:2022-03-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCT
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BU of 7vct by Molmil
Human p97 single hexamer conformer III with D1-ATPgammaS and D2-ADP bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
Deposit date:2021-09-04
Release date:2022-03-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.21 Å)
Cite:Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCX
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BU of 7vcx by Molmil
Human p97 single hexamer conformer II with ATPgammaS bound
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
Deposit date:2021-09-04
Release date:2022-03-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022
7VCS
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BU of 7vcs by Molmil
Human p97 double hexamer conformer II with ATPgammaS bound
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Gao, H, Li, F, Shi, Z, Li, Y, Yu, H.
Deposit date:2021-09-03
Release date:2022-03-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structures of human p97 double hexamer capture potentiated ATPase-competent state.
Cell Discov, 8, 2022

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